RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 UGGT1Q9NYU2 1555 aa13.54□□□□□ -0.24
HDAC9-220ENST00000461409 SPATA31D1Q6ZQQ2 1576 aa13.54□□□□□ -0.24
HDAC9-220ENST00000461409 CROCC2H7BZ55 1655 aa13.53□□□□□ -0.24
HDAC9-220ENST00000461409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.53□□□□□ -0.24
HDAC9-220ENST00000461409 DAPK1P53355 1430 aa13.53□□□□□ -0.24
HDAC9-220ENST00000461409 ERVK-7P63135 1459 aa13.53□□□□□ -0.24
HDAC9-220ENST00000461409 MROH1Q8NDA8 1641 aa13.53□□□□□ -0.24
HDAC9-220ENST00000461409 POLR1AO95602 1720 aaPredicted RBP13.53□□□□□ -0.24
HDAC9-220ENST00000461409 RRP7BPQ9NSQ0 103 aa13.52□□□□□ -0.25
HDAC9-220ENST00000461409 NEURL4Q96JN8 1562 aa13.52□□□□□ -0.25
HDAC9-220ENST00000461409 PRDM15P57071 1507 aaPredicted RBP13.51□□□□□ -0.25
HDAC9-220ENST00000461409 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
HDAC9-220ENST00000461409 CLCN6P51797 869 aa13.51□□□□□ -0.25
HDAC9-220ENST00000461409 DEPDC5O75140 1603 aa13.5□□□□□ -0.25
HDAC9-220ENST00000461409 ARHGAP31Q2M1Z3 1444 aa13.5□□□□□ -0.25
HDAC9-220ENST00000461409 UBAP1LF5GYI3 381 aa13.5□□□□□ -0.25
HDAC9-220ENST00000461409 MNX1P50219 401 aaPredicted RBP13.5□□□□□ -0.25
HDAC9-220ENST00000461409 CPS1P31327 1500 aa13.49□□□□□ -0.25
HDAC9-220ENST00000461409 MED14O60244 1454 aa13.49□□□□□ -0.25
HDAC9-220ENST00000461409 NPHP4O75161 1426 aaPredicted RBP13.49□□□□□ -0.25
HDAC9-220ENST00000461409 KANK1Q14678 1352 aa13.49□□□□□ -0.25
HDAC9-220ENST00000461409 CEP152O94986 1710 aa13.47□□□□□ -0.25
HDAC9-220ENST00000461409 DISP3Q9P2K9 1392 aa13.46□□□□□ -0.25
HDAC9-220ENST00000461409 CHIC2Q9UKJ5 165 aa13.46□□□□□ -0.25
HDAC9-220ENST00000461409 IQGAP1P46940 1657 aa13.44□□□□□ -0.26
HDAC9-220ENST00000461409 FAM50AQ14320 339 aaKnown RBP13.44□□□□□ -0.26
HDAC9-220ENST00000461409 VWDEQ8N2E2 1590 aa13.44□□□□□ -0.26
HDAC9-220ENST00000461409 ADGRL2O95490 1459 aa13.43□□□□□ -0.26
HDAC9-220ENST00000461409 SCAF11Q99590 1463 aaKnown RBP13.43□□□□□ -0.26
HDAC9-220ENST00000461409 TOM1O60784 492 aa13.43□□□□□ -0.26
HDAC9-220ENST00000461409 LMTK2Q8IWU2 1503 aa13.43□□□□□ -0.26
HDAC9-220ENST00000461409 UBR1Q8IWV7 1749 aa13.42□□□□□ -0.26
HDAC9-220ENST00000461409 EID1Q9Y6B2 187 aa13.42□□□□□ -0.26
HDAC9-220ENST00000461409 SLIT1O75093 1534 aa13.41□□□□□ -0.26
HDAC9-220ENST00000461409 ARHGAP23Q9P227 1491 aa13.41□□□□□ -0.26
HDAC9-220ENST00000461409 TXNDC2Q86VQ3 553 aa13.4□□□□□ -0.26
HDAC9-220ENST00000461409 DCBLD2Q96PD2 775 aa13.4□□□□□ -0.26
HDAC9-220ENST00000461409 ZRANB1Q9UGI0 708 aa13.4□□□□□ -0.26
HDAC9-220ENST00000461409 ANKRD50Q9ULJ7 1429 aa13.39□□□□□ -0.27
HDAC9-220ENST00000461409 EFCAB6Q5THR3 1501 aa13.39□□□□□ -0.27
HDAC9-220ENST00000461409 CFAP65Q6ZU64 1925 aaKnown RBP13.39□□□□□ -0.27
HDAC9-220ENST00000461409 TMEM2Q9UHN6 1383 aa13.38□□□□□ -0.27
HDAC9-220ENST00000461409 POTEIP0CG38 1075 aa13.38□□□□□ -0.27
HDAC9-220ENST00000461409 PIP4K2BP78356 416 aa13.38□□□□□ -0.27
HDAC9-220ENST00000461409 KDM5AP29375 1690 aaKnown RBP13.37□□□□□ -0.27
HDAC9-220ENST00000461409 SYNMO15061 1565 aa13.37□□□□□ -0.27
HDAC9-220ENST00000461409 RPRD2Q5VT52 1461 aaKnown RBP13.37□□□□□ -0.27
HDAC9-220ENST00000461409 LTKP29376 864 aa13.37□□□□□ -0.27
HDAC9-220ENST00000461409 MIER1Q8N108 512 aa13.37□□□□□ -0.27
HDAC9-220ENST00000461409 FBXO3Q9UK99 471 aa13.37□□□□□ -0.27
HDAC9-220ENST00000461409 PIK3C2BO00750 1634 aa13.37□□□□□ -0.27
HDAC9-220ENST00000461409 IDI1Q13907 227 aa13.36□□□□□ -0.27
HDAC9-220ENST00000461409 ZNF579Q8NAF0 562 aaKnown RBP13.36□□□□□ -0.27
HDAC9-220ENST00000461409 SLC52A1Q9NWF4 448 aa13.36□□□□□ -0.27
HDAC9-220ENST00000461409 NOS1P29475 1434 aa13.36□□□□□ -0.27
HDAC9-220ENST00000461409 LRRC7Q96NW7 1537 aa13.35□□□□□ -0.27
HDAC9-220ENST00000461409 ROCK1Q13464 1354 aa13.34□□□□□ -0.27
HDAC9-220ENST00000461409 HSPA1LP34931 641 aa13.34□□□□□ -0.27
HDAC9-220ENST00000461409 ADGRB3O60242 1522 aa13.34□□□□□ -0.27
HDAC9-220ENST00000461409 PLEKHG5O94827 1062 aa13.32□□□□□ -0.28
HDAC9-220ENST00000461409 ILDR2Q71H61 639 aa13.32□□□□□ -0.28
HDAC9-220ENST00000461409 PLCD3Q8N3E9 789 aa13.32□□□□□ -0.28
HDAC9-220ENST00000461409 STRCP1A6NGW2 1772 aa13.32□□□□□ -0.28
HDAC9-220ENST00000461409 PAK3O75914 559 aaPredicted RBP13.31□□□□□ -0.28
HDAC9-220ENST00000461409 TET3O43151 1660 aa13.31□□□□□ -0.28
HDAC9-220ENST00000461409 UNC13BO14795 1591 aa13.3□□□□□ -0.28
HDAC9-220ENST00000461409 SOCS7O14512 581 aa13.3□□□□□ -0.28
HDAC9-220ENST00000461409 ALKQ9UM73 1620 aa13.3□□□□□ -0.28
HDAC9-220ENST00000461409 HDGFP51858 240 aaKnown RBP13.29□□□□□ -0.28
HDAC9-220ENST00000461409 KCNA6P17658 529 aa13.27□□□□□ -0.29
HDAC9-220ENST00000461409 GCC2Q8IWJ2 1684 aa13.27□□□□□ -0.29
HDAC9-220ENST00000461409 PPP1R15AO75807 674 aaPredicted RBP13.26□□□□□ -0.29
HDAC9-220ENST00000461409 BCANQ96GW7 911 aa13.26□□□□□ -0.29
HDAC9-220ENST00000461409 SLC26A8Q96RN1 970 aa13.26□□□□□ -0.29
HDAC9-220ENST00000461409 MED1Q15648 1581 aaPredicted RBP13.25□□□□□ -0.29
HDAC9-220ENST00000461409 NKTRP30414 1462 aaKnown RBP13.25□□□□□ -0.29
HDAC9-220ENST00000461409 ZFYVE9O95405 1425 aa13.25□□□□□ -0.29
HDAC9-220ENST00000461409 ITGAEP38570 1179 aa13.25□□□□□ -0.29
HDAC9-220ENST00000461409 IQGAP3Q86VI3 1631 aa13.24□□□□□ -0.29
HDAC9-220ENST00000461409 RIMS2Q9UQ26 1411 aa13.24□□□□□ -0.29
HDAC9-220ENST00000461409 NUP155O75694 1391 aa13.24□□□□□ -0.29
HDAC9-220ENST00000461409 TMEM94Q12767 1356 aa13.24□□□□□ -0.29
HDAC9-220ENST00000461409 PLEKHG1Q9ULL1 1385 aa13.24□□□□□ -0.29
HDAC9-220ENST00000461409 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.24□□□□□ -0.29
HDAC9-220ENST00000461409 VASPP50552 380 aaPredicted RBP13.23□□□□□ -0.29
HDAC9-220ENST00000461409 PROSER2Q86WR7 435 aaPredicted RBP13.23□□□□□ -0.29
HDAC9-220ENST00000461409 TMEM131LA2VDJ0 1609 aa13.23□□□□□ -0.29
HDAC9-220ENST00000461409 CHGAP10645 457 aaKnown RBP13.22□□□□□ -0.29
HDAC9-220ENST00000461409 PPARGC1BQ86YN6 1023 aaKnown RBP13.22□□□□□ -0.29
HDAC9-220ENST00000461409 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
HDAC9-220ENST00000461409 E9PCH4 1651 aa13.21□□□□□ -0.29
HDAC9-220ENST00000461409 GALR2O43603 387 aaPredicted RBP13.21□□□□□ -0.29
HDAC9-220ENST00000461409 ZBTB47Q9UFB7 747 aaPredicted RBP13.21□□□□□ -0.29
HDAC9-220ENST00000461409 FAM135BQ49AJ0 1406 aa13.21□□□□□ -0.3
HDAC9-220ENST00000461409 XIRP1Q702N8 1843 aaKnown RBP13.2□□□□□ -0.3
HDAC9-220ENST00000461409 TBX22Q9Y458 520 aa13.19□□□□□ -0.3
HDAC9-220ENST00000461409 MSH6P52701 1360 aa13.19□□□□□ -0.3
HDAC9-220ENST00000461409 RRBP1Q9P2E9 1410 aaKnown RBP13.18□□□□□ -0.3
HDAC9-220ENST00000461409 MYO5BQ9ULV0 1848 aa13.18□□□□□ -0.3
HDAC9-220ENST00000461409 DIP2AQ14689 1571 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms