RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 IDI1Q13907 227 aa20.22■□□□□ 0.83
C9orf78-202ENST00000461349 LRP6O75581 1613 aa20.22■□□□□ 0.83
C9orf78-202ENST00000461349 LMTK2Q8IWU2 1503 aa20.19■□□□□ 0.82
C9orf78-202ENST00000461349 MYO5BQ9ULV0 1848 aa20.19■□□□□ 0.82
C9orf78-202ENST00000461349 RRP7BPQ9NSQ0 103 aa20.18■□□□□ 0.82
C9orf78-202ENST00000461349 AHDC1Q5TGY3 1603 aaPredicted RBP20.16■□□□□ 0.82
C9orf78-202ENST00000461349 RXRBP28702 533 aa20.16■□□□□ 0.82
C9orf78-202ENST00000461349 C14orf37Q86TY3 774 aa20.15■□□□□ 0.82
C9orf78-202ENST00000461349 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.15■□□□□ 0.82
C9orf78-202ENST00000461349 GCC2Q8IWJ2 1684 aa20.14■□□□□ 0.81
C9orf78-202ENST00000461349 CDK12Q9NYV4 1490 aaPredicted RBP20.14■□□□□ 0.81
C9orf78-202ENST00000461349 NCOA3Q9Y6Q9 1424 aa20.14■□□□□ 0.81
C9orf78-202ENST00000461349 NOS1P29475 1434 aa20.13■□□□□ 0.81
C9orf78-202ENST00000461349 PPP1R15AO75807 674 aaPredicted RBP20.13■□□□□ 0.81
C9orf78-202ENST00000461349 SLC52A1Q9NWF4 448 aa20.13■□□□□ 0.81
C9orf78-202ENST00000461349 PLEKHG1Q9ULL1 1385 aa20.12■□□□□ 0.81
C9orf78-202ENST00000461349 PTPN23Q9H3S7 1636 aa20.12■□□□□ 0.81
C9orf78-202ENST00000461349 ABCC5O15440 1437 aa20.11■□□□□ 0.81
C9orf78-202ENST00000461349 HDGFP51858 240 aaKnown RBP20.11■□□□□ 0.81
C9orf78-202ENST00000461349 VPS8Q8N3P4 1428 aa20.1■□□□□ 0.81
C9orf78-202ENST00000461349 CADPS2Q86UW7 1296 aa20.1■□□□□ 0.81
C9orf78-202ENST00000461349 ATF3P18847 181 aa20.09■□□□□ 0.81
C9orf78-202ENST00000461349 ZFYVE9O95405 1425 aa20.09■□□□□ 0.81
C9orf78-202ENST00000461349 DAPK1P53355 1430 aa20.09■□□□□ 0.81
C9orf78-202ENST00000461349 NUTM2BA6NNL0 878 aaPredicted RBP20.07■□□□□ 0.8
C9orf78-202ENST00000461349 NUTM2EB1AL46 878 aaPredicted RBP20.07■□□□□ 0.8
C9orf78-202ENST00000461349 KANK4Q5T7N3 995 aaPredicted RBP20.07■□□□□ 0.8
C9orf78-202ENST00000461349 NUTM2AQ8IVF1 878 aaPredicted RBP20.07■□□□□ 0.8
C9orf78-202ENST00000461349 RIMS2Q9UQ26 1411 aa20.07■□□□□ 0.8
C9orf78-202ENST00000461349 DIP2AQ14689 1571 aa20.07■□□□□ 0.8
C9orf78-202ENST00000461349 ANKRD30AQ9BXX3 1397 aa20.07■□□□□ 0.8
C9orf78-202ENST00000461349 RPRD2Q5VT52 1461 aaKnown RBP20.06■□□□□ 0.8
C9orf78-202ENST00000461349 C19orf44Q9H6X5 657 aa20.06■□□□□ 0.8
C9orf78-202ENST00000461349 TMEM131LA2VDJ0 1609 aa20.05■□□□□ 0.8
C9orf78-202ENST00000461349 TBX22Q9Y458 520 aa20.05■□□□□ 0.8
C9orf78-202ENST00000461349 AFF2P51816 1311 aa20.03■□□□□ 0.8
C9orf78-202ENST00000461349 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.01■□□□□ 0.79
C9orf78-202ENST00000461349 CHIC2Q9UKJ5 165 aa20.01■□□□□ 0.79
C9orf78-202ENST00000461349 NHSL1Q5SYE7 1610 aa20.01■□□□□ 0.79
C9orf78-202ENST00000461349 PIK3R4Q99570 1358 aa20■□□□□ 0.79
C9orf78-202ENST00000461349 TRPM2O94759 1503 aa19.99■□□□□ 0.79
C9orf78-202ENST00000461349 BRINP3Q76B58 766 aa19.99■□□□□ 0.79
C9orf78-202ENST00000461349 RGS12O14924 1447 aa19.99■□□□□ 0.79
C9orf78-202ENST00000461349 ASXL1Q8IXJ9 1541 aa19.98■□□□□ 0.79
C9orf78-202ENST00000461349 ADAMTS13Q76LX8 1427 aa19.97■□□□□ 0.79
C9orf78-202ENST00000461349 RBM6P78332 1123 aaKnown RBP19.97■□□□□ 0.79
C9orf78-202ENST00000461349 NUTM2DQ5VT03 806 aaPredicted RBP19.97■□□□□ 0.79
C9orf78-202ENST00000461349 DCCP43146 1447 aa19.96■□□□□ 0.79
C9orf78-202ENST00000461349 SETD5Q9C0A6 1442 aa19.96■□□□□ 0.79
C9orf78-202ENST00000461349 CHGAP10645 457 aaKnown RBP19.96■□□□□ 0.79
C9orf78-202ENST00000461349 FOXD1Q16676 465 aa19.96■□□□□ 0.79
C9orf78-202ENST00000461349 C8orf37Q96NL8 207 aa19.95■□□□□ 0.78
C9orf78-202ENST00000461349 QTRT2Q9H974 415 aaKnown RBP19.95■□□□□ 0.78
C9orf78-202ENST00000461349 LRRC59Q96AG4 307 aaKnown RBP19.94■□□□□ 0.78
C9orf78-202ENST00000461349 SRCAPQ6ZRS2 3230 aa19.94■□□□□ 0.78
C9orf78-202ENST00000461349 NGLY1Q96IV0 654 aa19.92■□□□□ 0.78
C9orf78-202ENST00000461349 AMOTL2Q9Y2J4 779 aa19.92■□□□□ 0.78
C9orf78-202ENST00000461349 ATAD2Q6PL18 1390 aa19.92■□□□□ 0.78
C9orf78-202ENST00000461349 ADGRL2O95490 1459 aa19.92■□□□□ 0.78
C9orf78-202ENST00000461349 UNC13BO14795 1591 aa19.91■□□□□ 0.78
C9orf78-202ENST00000461349 E9PCH4 1651 aa19.91■□□□□ 0.78
C9orf78-202ENST00000461349 APLP2Q06481 763 aa19.9■□□□□ 0.78
C9orf78-202ENST00000461349 XRN1Q8IZH2 1706 aaKnown RBP19.9■□□□□ 0.78
C9orf78-202ENST00000461349 MST1RQ04912 1400 aa19.89■□□□□ 0.77
C9orf78-202ENST00000461349 ZRANB1Q9UGI0 708 aa19.89■□□□□ 0.77
C9orf78-202ENST00000461349 ANKRD50Q9ULJ7 1429 aa19.89■□□□□ 0.77
C9orf78-202ENST00000461349 PTPRUQ92729 1446 aa19.87■□□□□ 0.77
C9orf78-202ENST00000461349 PNPLA6Q8IY17 1366 aa19.87■□□□□ 0.77
C9orf78-202ENST00000461349 NRXN3Q9Y4C0 1643 aa19.84■□□□□ 0.77
C9orf78-202ENST00000461349 NALCNQ8IZF0 1738 aa19.83■□□□□ 0.77
C9orf78-202ENST00000461349 ADAMTS2O95450 1211 aa19.83■□□□□ 0.77
C9orf78-202ENST00000461349 IQGAP3Q86VI3 1631 aa19.81■□□□□ 0.76
C9orf78-202ENST00000461349 SETBP1Q9Y6X0 1596 aa19.81■□□□□ 0.76
C9orf78-202ENST00000461349 ADGRL3Q9HAR2 1447 aa19.8■□□□□ 0.76
C9orf78-202ENST00000461349 DDX17Q92841 729 aaKnown RBP19.8■□□□□ 0.76
C9orf78-202ENST00000461349 USP21Q9UK80 565 aa19.8■□□□□ 0.76
C9orf78-202ENST00000461349 TRPC5Q9UL62 973 aaPredicted RBP19.8■□□□□ 0.76
C9orf78-202ENST00000461349 LAMC1P11047 1609 aa19.79■□□□□ 0.76
C9orf78-202ENST00000461349 FAM50AQ14320 339 aaKnown RBP19.78■□□□□ 0.76
C9orf78-202ENST00000461349 CCDC125Q86Z20 511 aa19.76■□□□□ 0.75
C9orf78-202ENST00000461349 PTCH1Q13635 1447 aa19.76■□□□□ 0.75
C9orf78-202ENST00000461349 EP400Q96L91 3159 aa19.75■□□□□ 0.75
C9orf78-202ENST00000461349 MARF1Q9Y4F3 1742 aaKnown RBP19.75■□□□□ 0.75
C9orf78-202ENST00000461349 SPHKAPQ2M3C7 1700 aa19.74■□□□□ 0.75
C9orf78-202ENST00000461349 LOC105371045A0A1W2PR82 267 aa19.73■□□□□ 0.75
C9orf78-202ENST00000461349 C1orf167Q5SNV9 1468 aa19.73■□□□□ 0.75
C9orf78-202ENST00000461349 COL22A1Q8NFW1 1626 aaPredicted RBP19.73■□□□□ 0.75
C9orf78-202ENST00000461349 METP08581 1390 aa19.72■□□□□ 0.75
C9orf78-202ENST00000461349 ATRNO75882 1429 aa19.72■□□□□ 0.75
C9orf78-202ENST00000461349 ZNF326Q5BKZ1 582 aaKnown RBP19.71■□□□□ 0.75
C9orf78-202ENST00000461349 FNBP4Q8N3X1 1017 aaPredicted RBP19.71■□□□□ 0.75
C9orf78-202ENST00000461349 SOS2Q07890 1332 aaPredicted RBP19.69■□□□□ 0.74
C9orf78-202ENST00000461349 NUP155O75694 1391 aa19.66■□□□□ 0.74
C9orf78-202ENST00000461349 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.65■□□□□ 0.74
C9orf78-202ENST00000461349 KIF1BO60333 1816 aa19.65■□□□□ 0.74
C9orf78-202ENST00000461349 ORAI2Q96SN7 254 aa19.64■□□□□ 0.73
C9orf78-202ENST00000461349 LRP5O75197 1615 aa19.63■□□□□ 0.73
C9orf78-202ENST00000461349 NEXMIFQ5QGS0 1516 aa19.63■□□□□ 0.73
C9orf78-202ENST00000461349 BCL9LQ86UU0 1499 aa19.62■□□□□ 0.73
C9orf78-202ENST00000461349 BLMP54132 1417 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms