RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 CFAP70Q5T0N1 1121 aa18.26■□□□□ 0.51
NCL-207ENST00000461347 FOXD4L1Q9NU39 408 aa18.26■□□□□ 0.51
NCL-207ENST00000461347 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
NCL-207ENST00000461347 IPO8O15397 1037 aaKnown RBP18.25■□□□□ 0.51
NCL-207ENST00000461347 TEX14Q8IWB6 1497 aa18.24■□□□□ 0.51
NCL-207ENST00000461347 ZKSCAN2Q63HK3 967 aa18.24■□□□□ 0.51
NCL-207ENST00000461347 AFAP1Q8N556 730 aa18.23■□□□□ 0.51
NCL-207ENST00000461347 RNF123Q5XPI4 1314 aa18.22■□□□□ 0.51
NCL-207ENST00000461347 SLFN5Q08AF3 891 aa18.22■□□□□ 0.51
NCL-207ENST00000461347 APBB1O00213 710 aa18.22■□□□□ 0.51
NCL-207ENST00000461347 TCP11L2Q8N4U5 519 aa18.22■□□□□ 0.51
NCL-207ENST00000461347 MAGI3Q5TCQ9 1506 aa18.21■□□□□ 0.51
NCL-207ENST00000461347 GPATCH8Q9UKJ3 1502 aaKnown RBP18.21■□□□□ 0.51
NCL-207ENST00000461347 TPRNQ4KMQ1 711 aa18.21■□□□□ 0.51
NCL-207ENST00000461347 DUSP27Q5VZP5 1158 aa18.21■□□□□ 0.51
NCL-207ENST00000461347 NGEFQ8N5V2 710 aa18.21■□□□□ 0.51
NCL-207ENST00000461347 RUNDC1Q96C34 613 aa18.21■□□□□ 0.51
NCL-207ENST00000461347 ESF1Q9H501 851 aaKnown RBP18.21■□□□□ 0.51
NCL-207ENST00000461347 DISP3Q9P2K9 1392 aa18.21■□□□□ 0.51
NCL-207ENST00000461347 GBP4Q96PP9 640 aa18.2■□□□□ 0.5
NCL-207ENST00000461347 SPATA31E1Q6ZUB1 1445 aa18.2■□□□□ 0.5
NCL-207ENST00000461347 CHMP4BQ9H444 224 aaKnown RBP18.19■□□□□ 0.5
NCL-207ENST00000461347 ARHGAP5Q13017 1502 aa18.19■□□□□ 0.5
NCL-207ENST00000461347 RALGAPBQ86X10 1494 aa18.19■□□□□ 0.5
NCL-207ENST00000461347 DZIP1LQ8IYY4 767 aaKnown RBP18.19■□□□□ 0.5
NCL-207ENST00000461347 NUP153P49790 1475 aaKnown RBP18.19■□□□□ 0.5
NCL-207ENST00000461347 PDE3AQ14432 1141 aa18.18■□□□□ 0.5
NCL-207ENST00000461347 PZPP20742 1482 aa18.18■□□□□ 0.5
NCL-207ENST00000461347 KDM6BO15054 1643 aa18.18■□□□□ 0.5
NCL-207ENST00000461347 MTHFSP49914 203 aa18.17■□□□□ 0.5
NCL-207ENST00000461347 PDZRN3Q9UPQ7 1066 aa18.17■□□□□ 0.5
NCL-207ENST00000461347 ADCY10Q96PN6 1610 aa18.17■□□□□ 0.5
NCL-207ENST00000461347 ELL2O00472 640 aaPredicted RBP18.17■□□□□ 0.5
NCL-207ENST00000461347 CASC1Q6TDU7 716 aa18.16■□□□□ 0.5
NCL-207ENST00000461347 RAPGEF6Q8TEU7 1601 aa18.16■□□□□ 0.5
NCL-207ENST00000461347 ABCA8O94911 1581 aa18.16■□□□□ 0.5
NCL-207ENST00000461347 PARD3Q8TEW0 1356 aa18.16■□□□□ 0.5
NCL-207ENST00000461347 TMEM132EQ6IEE7 984 aa18.15■□□□□ 0.5
NCL-207ENST00000461347 PLPPR3Q6T4P5 718 aa18.15■□□□□ 0.5
NCL-207ENST00000461347 RSPH6AQ9H0K4 717 aa18.15■□□□□ 0.5
NCL-207ENST00000461347 LRPPRCP42704 1394 aaKnown RBP18.15■□□□□ 0.5
NCL-207ENST00000461347 C22orf23Q9BZE7 217 aa18.14■□□□□ 0.49
NCL-207ENST00000461347 SLC12A5Q9H2X9 1139 aa18.14■□□□□ 0.49
NCL-207ENST00000461347 PTMAP06454 111 aaKnown RBP18.14■□□□□ 0.49
NCL-207ENST00000461347 HDGFL2Q7Z4V5 671 aaPredicted RBP18.14■□□□□ 0.49
NCL-207ENST00000461347 VSIG10Q8N0Z9 540 aa18.14■□□□□ 0.49
NCL-207ENST00000461347 CHMP5Q9NZZ3 219 aa18.13■□□□□ 0.49
NCL-207ENST00000461347 PER1O15534 1290 aaPredicted RBP18.13■□□□□ 0.49
NCL-207ENST00000461347 LNPKQ9C0E8 428 aa18.13■□□□□ 0.49
NCL-207ENST00000461347 ANKRD45Q5TZF3 282 aa18.12■□□□□ 0.49
NCL-207ENST00000461347 STAC3Q96MF2 364 aa18.12■□□□□ 0.49
NCL-207ENST00000461347 PKNOX2Q96KN3 472 aa18.12■□□□□ 0.49
NCL-207ENST00000461347 CCDC141Q6ZP82 1450 aa18.11■□□□□ 0.49
NCL-207ENST00000461347 SOX12O15370 315 aa18.11■□□□□ 0.49
NCL-207ENST00000461347 DDX19BQ9UMR2 479 aa18.11■□□□□ 0.49
NCL-207ENST00000461347 WWC1Q8IX03 1113 aa18.1■□□□□ 0.49
NCL-207ENST00000461347 DDX11L8A8MPP1 907 aa18.1■□□□□ 0.49
NCL-207ENST00000461347 TERF2IPQ9NYB0 399 aa18.1■□□□□ 0.49
NCL-207ENST00000461347 TESK2Q96S53 571 aa18.1■□□□□ 0.49
NCL-207ENST00000461347 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.09■□□□□ 0.49
NCL-207ENST00000461347 MSNP26038 577 aaKnown RBP18.09■□□□□ 0.49
NCL-207ENST00000461347 TSR2Q969E8 191 aaKnown RBP18.09■□□□□ 0.49
NCL-207ENST00000461347 EVC2Q86UK5 1308 aa18.08■□□□□ 0.49
NCL-207ENST00000461347 GGNBP2Q9H3C7 697 aa18.08■□□□□ 0.49
NCL-207ENST00000461347 IGHDP01880 384 aa18.08■□□□□ 0.48
NCL-207ENST00000461347 GCC2Q8IWJ2 1684 aa18.07■□□□□ 0.48
NCL-207ENST00000461347 PLEKHH2Q8IVE3 1493 aa18.07■□□□□ 0.48
NCL-207ENST00000461347 RIPK4P57078 832 aa18.07■□□□□ 0.48
NCL-207ENST00000461347 DNTTIP2Q5QJE6 756 aaKnown RBP18.07■□□□□ 0.48
NCL-207ENST00000461347 DNMT1P26358 1616 aaKnown RBP18.06■□□□□ 0.48
NCL-207ENST00000461347 EXOSC9Q06265 439 aaKnown RBP18.06■□□□□ 0.48
NCL-207ENST00000461347 C8orf34Q49A92 452 aa18.06■□□□□ 0.48
NCL-207ENST00000461347 PRAG1Q86YV5 1406 aa18.06■□□□□ 0.48
NCL-207ENST00000461347 MINK1Q8N4C8 1332 aaPredicted RBP18.06■□□□□ 0.48
NCL-207ENST00000461347 PLEKHH1Q9ULM0 1364 aa18.05■□□□□ 0.48
NCL-207ENST00000461347 CABP2Q9NPB3 220 aa18.05■□□□□ 0.48
NCL-207ENST00000461347 AMER1Q5JTC6 1135 aaPredicted RBP18.04■□□□□ 0.48
NCL-207ENST00000461347 TRAK2O60296 914 aa18.04■□□□□ 0.48
NCL-207ENST00000461347 AAMPQ13685 434 aa18.04■□□□□ 0.48
NCL-207ENST00000461347 NKTRP30414 1462 aaKnown RBP18.04■□□□□ 0.48
NCL-207ENST00000461347 PLCB2Q00722 1185 aa18.04■□□□□ 0.48
NCL-207ENST00000461347 DDX49Q9Y6V7 483 aaKnown RBP18.03■□□□□ 0.48
NCL-207ENST00000461347 KIF14Q15058 1648 aa18.03■□□□□ 0.48
NCL-207ENST00000461347 CALD1Q05682 793 aaKnown RBP18.03■□□□□ 0.48
NCL-207ENST00000461347 ZBTB7CA1YPR0 619 aa18.02■□□□□ 0.47
NCL-207ENST00000461347 PLEKHG5O94827 1062 aa18.02■□□□□ 0.47
NCL-207ENST00000461347 RARSP54136 660 aaKnown RBP18.01■□□□□ 0.47
NCL-207ENST00000461347 DENND4BO75064 1496 aaPredicted RBP18.01■□□□□ 0.47
NCL-207ENST00000461347 FAM43AQ8N2R8 423 aa18.01■□□□□ 0.47
NCL-207ENST00000461347 UHRF1BP1Q6BDS2 1440 aa18.01■□□□□ 0.47
NCL-207ENST00000461347 VGFO15240 615 aaPredicted RBP18.01■□□□□ 0.47
NCL-207ENST00000461347 DIAPH1O60610 1272 aaKnown RBP18.01■□□□□ 0.47
NCL-207ENST00000461347 PTMSP20962 102 aa18■□□□□ 0.47
NCL-207ENST00000461347 MVPQ14764 893 aaKnown RBP17.99■□□□□ 0.47
NCL-207ENST00000461347 FOXD4L5Q5VV16 416 aaPredicted RBP17.99■□□□□ 0.47
NCL-207ENST00000461347 FOXD4L4Q8WXT5 416 aaPredicted RBP17.99■□□□□ 0.47
NCL-207ENST00000461347 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
NCL-207ENST00000461347 KDM5BQ9UGL1 1544 aa17.99■□□□□ 0.47
NCL-207ENST00000461347 MLECQ14165 292 aa17.99■□□□□ 0.47
NCL-207ENST00000461347 WDR63Q8IWG1 891 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms