RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 NPM1P06748 294 aaKnown RBP eCLIP13.27□□□□□ -0.29
DHFR2-203ENST00000461173 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
DHFR2-203ENST00000461173 POGZQ7Z3K3 1410 aa13.26□□□□□ -0.29
DHFR2-203ENST00000461173 MAP3K4Q9Y6R4 1608 aa13.26□□□□□ -0.29
DHFR2-203ENST00000461173 PANK3Q9H999 370 aa13.25□□□□□ -0.29
DHFR2-203ENST00000461173 RBM19Q9Y4C8 960 aaKnown RBP13.25□□□□□ -0.29
DHFR2-203ENST00000461173 BLMP54132 1417 aaPredicted RBP13.25□□□□□ -0.29
DHFR2-203ENST00000461173 NEO1Q92859 1461 aa13.24□□□□□ -0.29
DHFR2-203ENST00000461173 KIF1BO60333 1816 aa13.24□□□□□ -0.29
DHFR2-203ENST00000461173 SBNO2Q9Y2G9 1366 aa13.24□□□□□ -0.29
DHFR2-203ENST00000461173 IFT172Q9UG01 1749 aa13.24□□□□□ -0.29
DHFR2-203ENST00000461173 CD109Q6YHK3 1445 aa13.24□□□□□ -0.29
DHFR2-203ENST00000461173 PPRC1Q5VV67 1664 aaKnown RBP13.23□□□□□ -0.29
DHFR2-203ENST00000461173 HECW2Q9P2P5 1572 aa13.22□□□□□ -0.29
DHFR2-203ENST00000461173 SETBP1Q9Y6X0 1596 aa13.22□□□□□ -0.29
DHFR2-203ENST00000461173 ADGRB3O60242 1522 aa13.22□□□□□ -0.29
DHFR2-203ENST00000461173 IRX6P78412 446 aaPredicted RBP13.22□□□□□ -0.29
DHFR2-203ENST00000461173 MYO3AQ8NEV4 1616 aa13.21□□□□□ -0.29
DHFR2-203ENST00000461173 BCL11AQ9H165 835 aa13.2□□□□□ -0.3
DHFR2-203ENST00000461173 PIK3C2GO75747 1445 aa13.2□□□□□ -0.3
DHFR2-203ENST00000461173 ASXL1Q8IXJ9 1541 aa13.2□□□□□ -0.3
DHFR2-203ENST00000461173 FRMPD1Q5SYB0 1578 aa13.2□□□□□ -0.3
DHFR2-203ENST00000461173 KNSTRNQ9Y448 316 aa13.2□□□□□ -0.3
DHFR2-203ENST00000461173 RPGRIP1LQ68CZ1 1315 aa13.2□□□□□ -0.3
DHFR2-203ENST00000461173 ABCA6Q8N139 1617 aa13.19□□□□□ -0.3
DHFR2-203ENST00000461173 AMER1Q5JTC6 1135 aaPredicted RBP13.19□□□□□ -0.3
DHFR2-203ENST00000461173 FANCIQ9NVI1 1328 aa13.19□□□□□ -0.3
DHFR2-203ENST00000461173 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
DHFR2-203ENST00000461173 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
DHFR2-203ENST00000461173 MYOM1P52179 1685 aa13.17□□□□□ -0.3
DHFR2-203ENST00000461173 NPATQ14207 1427 aa13.17□□□□□ -0.3
DHFR2-203ENST00000461173 CNGB1Q14028 1251 aaPredicted RBP13.16□□□□□ -0.3
DHFR2-203ENST00000461173 CC2D1BQ5T0F9 858 aaKnown RBP13.16□□□□□ -0.3
DHFR2-203ENST00000461173 ABCC3O15438 1527 aa13.16□□□□□ -0.3
DHFR2-203ENST00000461173 ARHGAP31Q2M1Z3 1444 aa13.16□□□□□ -0.3
DHFR2-203ENST00000461173 NOS1P29475 1434 aa13.15□□□□□ -0.3
DHFR2-203ENST00000461173 UGGT1Q9NYU2 1555 aa13.15□□□□□ -0.3
DHFR2-203ENST00000461173 ERVK-7P63135 1459 aa13.15□□□□□ -0.3
DHFR2-203ENST00000461173 MROH2AA6NES4 1674 aa13.15□□□□□ -0.3
DHFR2-203ENST00000461173 ADGRF5Q8IZF2 1346 aa13.14□□□□□ -0.31
DHFR2-203ENST00000461173 PPP2R1AP30153 589 aa13.14□□□□□ -0.31
DHFR2-203ENST00000461173 B4GALNT3Q6L9W6 998 aa13.14□□□□□ -0.31
DHFR2-203ENST00000461173 PUS7Q96PZ0 661 aaKnown RBP13.14□□□□□ -0.31
DHFR2-203ENST00000461173 RRP1P56182 461 aaKnown RBP13.13□□□□□ -0.31
DHFR2-203ENST00000461173 RCAN3Q9UKA8 241 aa13.13□□□□□ -0.31
DHFR2-203ENST00000461173 PPLO60437 1756 aa13.13□□□□□ -0.31
DHFR2-203ENST00000461173 CFAP70Q5T0N1 1121 aa13.13□□□□□ -0.31
DHFR2-203ENST00000461173 NGEFQ8N5V2 710 aa13.13□□□□□ -0.31
DHFR2-203ENST00000461173 C14orf93Q9H972 538 aaKnown RBP13.13□□□□□ -0.31
DHFR2-203ENST00000461173 ZC3H13Q5T200 1668 aaKnown RBP13.12□□□□□ -0.31
DHFR2-203ENST00000461173 GLI2P10070 1586 aa13.12□□□□□ -0.31
DHFR2-203ENST00000461173 PIK3C2BO00750 1634 aa13.12□□□□□ -0.31
DHFR2-203ENST00000461173 ANP32EQ9BTT0 268 aa13.11□□□□□ -0.31
DHFR2-203ENST00000461173 CAMSAP1Q5T5Y3 1602 aa13.11□□□□□ -0.31
DHFR2-203ENST00000461173 ADGRB1O14514 1584 aa13.1□□□□□ -0.31
DHFR2-203ENST00000461173 DIP2CQ9Y2E4 1556 aa13.1□□□□□ -0.31
DHFR2-203ENST00000461173 ZFYVE9O95405 1425 aa13.1□□□□□ -0.31
DHFR2-203ENST00000461173 CCDC136Q96JN2 1154 aa13.1□□□□□ -0.31
DHFR2-203ENST00000461173 CENPJQ9HC77 1338 aaPredicted RBP13.09□□□□□ -0.31
DHFR2-203ENST00000461173 RICTORQ6R327 1708 aa13.09□□□□□ -0.31
DHFR2-203ENST00000461173 ZNF521Q96K83 1311 aa13.08□□□□□ -0.32
DHFR2-203ENST00000461173 WDR43Q15061 677 aaKnown RBP eCLIP13.08□□□□□ -0.32
DHFR2-203ENST00000461173 ADAMTS8Q9UP79 889 aa13.08□□□□□ -0.32
DHFR2-203ENST00000461173 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
DHFR2-203ENST00000461173 SLC52A1Q9NWF4 448 aa13.06□□□□□ -0.32
DHFR2-203ENST00000461173 POLR3AO14802 1390 aaPredicted RBP13.05□□□□□ -0.32
DHFR2-203ENST00000461173 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
DHFR2-203ENST00000461173 GGT6Q6P531 493 aa13.05□□□□□ -0.32
DHFR2-203ENST00000461173 NEXMIFQ5QGS0 1516 aa13.04□□□□□ -0.32
DHFR2-203ENST00000461173 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
DHFR2-203ENST00000461173 CARD14Q9BXL6 1004 aa13.03□□□□□ -0.32
DHFR2-203ENST00000461173 PPP6R1Q9UPN7 881 aa13.03□□□□□ -0.32
DHFR2-203ENST00000461173 QRICH2Q9H0J4 1663 aa13.03□□□□□ -0.32
DHFR2-203ENST00000461173 SIGLEC1Q9BZZ2 1709 aa13.03□□□□□ -0.32
DHFR2-203ENST00000461173 REREQ9P2R6 1566 aa13.02□□□□□ -0.32
DHFR2-203ENST00000461173 NINLQ9Y2I6 1382 aa13.02□□□□□ -0.32
DHFR2-203ENST00000461173 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.33
DHFR2-203ENST00000461173 TRMT2AQ8IZ69 625 aaKnown RBP13.02□□□□□ -0.33
DHFR2-203ENST00000461173 NSD2O96028 1365 aa13.01□□□□□ -0.33
DHFR2-203ENST00000461173 PLEKHH1Q9ULM0 1364 aa13.01□□□□□ -0.33
DHFR2-203ENST00000461173 RAPGEF3O95398 923 aa13.01□□□□□ -0.33
DHFR2-203ENST00000461173 GOLGA2Q08379 1002 aa13.01□□□□□ -0.33
DHFR2-203ENST00000461173 DUSP27Q5VZP5 1158 aa13.01□□□□□ -0.33
DHFR2-203ENST00000461173 PRKCSHP14314 528 aaPredicted RBP13□□□□□ -0.33
DHFR2-203ENST00000461173 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
DHFR2-203ENST00000461173 ERICH6Q7L0X2 663 aa12.99□□□□□ -0.33
DHFR2-203ENST00000461173 EXOC6Q8TAG9 804 aa12.99□□□□□ -0.33
DHFR2-203ENST00000461173 TCERG1O14776 1098 aaKnown RBP12.99□□□□□ -0.33
DHFR2-203ENST00000461173 MS4A1P11836 297 aa12.99□□□□□ -0.33
DHFR2-203ENST00000461173 SLFN5Q08AF3 891 aa12.99□□□□□ -0.33
DHFR2-203ENST00000461173 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
DHFR2-203ENST00000461173 AGLP35573 1532 aa12.98□□□□□ -0.33
DHFR2-203ENST00000461173 EVC2Q86UK5 1308 aa12.98□□□□□ -0.33
DHFR2-203ENST00000461173 SALL2Q9Y467 1007 aaPredicted RBP12.98□□□□□ -0.33
DHFR2-203ENST00000461173 CFAP65Q6ZU64 1925 aaKnown RBP12.98□□□□□ -0.33
DHFR2-203ENST00000461173 NSD3Q9BZ95 1437 aa12.98□□□□□ -0.33
DHFR2-203ENST00000461173 MSH5O43196 834 aa12.97□□□□□ -0.33
DHFR2-203ENST00000461173 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.97□□□□□ -0.33
DHFR2-203ENST00000461173 YEATS2Q9ULM3 1422 aa12.97□□□□□ -0.33
DHFR2-203ENST00000461173 ANKRD36BQ8N2N9 1353 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms