RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 TRAPPC8Q9Y2L5 1435 aa15.85■□□□□ 0.13
GCOM1-203ENST00000460962 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.84■□□□□ 0.13
GCOM1-203ENST00000460962 ABCC1P33527 1531 aa15.84■□□□□ 0.13
GCOM1-203ENST00000460962 ERCC6L2Q5T890 1561 aa15.83■□□□□ 0.13
GCOM1-203ENST00000460962 CENPQQ7L2Z9 268 aaPredicted RBP15.83■□□□□ 0.13
GCOM1-203ENST00000460962 STAC3Q96MF2 364 aa15.83■□□□□ 0.13
GCOM1-203ENST00000460962 ASXL1Q8IXJ9 1541 aa15.83■□□□□ 0.13
GCOM1-203ENST00000460962 SPAG9O60271 1321 aaKnown RBP15.83■□□□□ 0.12
GCOM1-203ENST00000460962 KDM2BQ8NHM5 1336 aa15.83■□□□□ 0.12
GCOM1-203ENST00000460962 TRPM2O94759 1503 aa15.83■□□□□ 0.12
GCOM1-203ENST00000460962 PPM1GO15355 546 aaPredicted RBP15.83■□□□□ 0.12
GCOM1-203ENST00000460962 USP35Q9P2H5 1018 aa15.83■□□□□ 0.12
GCOM1-203ENST00000460962 ZNF521Q96K83 1311 aa15.83■□□□□ 0.12
GCOM1-203ENST00000460962 SPHKAPQ2M3C7 1700 aa15.82■□□□□ 0.12
GCOM1-203ENST00000460962 SCAPERQ9BY12 1400 aa15.82■□□□□ 0.12
GCOM1-203ENST00000460962 PIK3C2GO75747 1445 aa15.82■□□□□ 0.12
GCOM1-203ENST00000460962 EIF3AQ14152 1382 aaKnown RBP15.81■□□□□ 0.12
GCOM1-203ENST00000460962 CEP152O94986 1710 aa15.8■□□□□ 0.12
GCOM1-203ENST00000460962 CLASP1Q7Z460 1538 aa15.79■□□□□ 0.12
GCOM1-203ENST00000460962 SLFN5Q08AF3 891 aa15.79■□□□□ 0.12
GCOM1-203ENST00000460962 NPC1L1Q9UHC9 1359 aa15.79■□□□□ 0.12
GCOM1-203ENST00000460962 PTPRTO14522 1441 aa15.79■□□□□ 0.12
GCOM1-203ENST00000460962 CCDC146Q8IYE0 955 aa15.79■□□□□ 0.12
GCOM1-203ENST00000460962 AFAP1Q8N556 730 aa15.79■□□□□ 0.12
GCOM1-203ENST00000460962 ZCCHC11Q5TAX3 1644 aaKnown RBP15.79■□□□□ 0.12
GCOM1-203ENST00000460962 CLTCL1P53675 1640 aa15.78■□□□□ 0.12
GCOM1-203ENST00000460962 RTEL1-TNFRSF6BF6WH68 1400 aa15.77■□□□□ 0.12
GCOM1-203ENST00000460962 MYOM1P52179 1685 aa15.76■□□□□ 0.11
GCOM1-203ENST00000460962 ZFYVE16Q7Z3T8 1539 aa15.76■□□□□ 0.11
GCOM1-203ENST00000460962 KANK1Q14678 1352 aa15.76■□□□□ 0.11
GCOM1-203ENST00000460962 FAM161AQ3B820 660 aa15.76■□□□□ 0.11
GCOM1-203ENST00000460962 DAXXQ9UER7 740 aaPredicted RBP15.76■□□□□ 0.11
GCOM1-203ENST00000460962 APAF1O14727 1248 aa15.75■□□□□ 0.11
GCOM1-203ENST00000460962 KDM5AP29375 1690 aaKnown RBP15.75■□□□□ 0.11
GCOM1-203ENST00000460962 TET3O43151 1660 aa15.74■□□□□ 0.11
GCOM1-203ENST00000460962 NKTRP30414 1462 aaKnown RBP15.74■□□□□ 0.11
GCOM1-203ENST00000460962 SLC24A1O60721 1099 aa15.74■□□□□ 0.11
GCOM1-203ENST00000460962 TRMT2AQ8IZ69 625 aaKnown RBP15.74■□□□□ 0.11
GCOM1-203ENST00000460962 DEPDC5O75140 1603 aa15.73■□□□□ 0.11
GCOM1-203ENST00000460962 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
GCOM1-203ENST00000460962 UHRF1BP1LA0JNW5 1464 aa15.72■□□□□ 0.11
GCOM1-203ENST00000460962 RGS3P49796 1198 aa15.72■□□□□ 0.11
GCOM1-203ENST00000460962 KIAA1210Q9ULL0 1709 aa15.72■□□□□ 0.11
GCOM1-203ENST00000460962 E9PSI1 815 aa15.72■□□□□ 0.11
GCOM1-203ENST00000460962 C8orf34Q49A92 452 aa15.72■□□□□ 0.11
GCOM1-203ENST00000460962 CFAP70Q5T0N1 1121 aa15.71■□□□□ 0.11
GCOM1-203ENST00000460962 KIF3BO15066 747 aa15.71■□□□□ 0.1
GCOM1-203ENST00000460962 SLC4A3P48751 1232 aa15.71■□□□□ 0.1
GCOM1-203ENST00000460962 BCAR3O75815 825 aa15.7■□□□□ 0.1
GCOM1-203ENST00000460962 ARAP3Q8WWN8 1544 aa15.7■□□□□ 0.1
GCOM1-203ENST00000460962 ERVK-7P63135 1459 aa15.69■□□□□ 0.1
GCOM1-203ENST00000460962 NGEFQ8N5V2 710 aa15.69■□□□□ 0.1
GCOM1-203ENST00000460962 ATP7AQ04656 1500 aa15.69■□□□□ 0.1
GCOM1-203ENST00000460962 CARD14Q9BXL6 1004 aa15.68■□□□□ 0.1
GCOM1-203ENST00000460962 MAP3K4Q9Y6R4 1608 aa15.68■□□□□ 0.1
GCOM1-203ENST00000460962 ADGRF5Q8IZF2 1346 aa15.67■□□□□ 0.1
GCOM1-203ENST00000460962 VWDEQ8N2E2 1590 aa15.67■□□□□ 0.1
GCOM1-203ENST00000460962 MYOM2P54296 1465 aa15.67■□□□□ 0.1
GCOM1-203ENST00000460962 NEURL4Q96JN8 1562 aa15.67■□□□□ 0.1
GCOM1-203ENST00000460962 NFKBIBQ15653 356 aa15.67■□□□□ 0.1
GCOM1-203ENST00000460962 ABCA6Q8N139 1617 aa15.66■□□□□ 0.1
GCOM1-203ENST00000460962 UGGT1Q9NYU2 1555 aa15.66■□□□□ 0.1
GCOM1-203ENST00000460962 DMRT2Q9Y5R5 561 aa15.65■□□□□ 0.1
GCOM1-203ENST00000460962 INO80Q9ULG1 1556 aaPredicted RBP15.65■□□□□ 0.1
GCOM1-203ENST00000460962 FANCAO15360 1455 aa15.65■□□□□ 0.1
GCOM1-203ENST00000460962 CANXP27824 592 aaKnown RBP15.65■□□□□ 0.1
GCOM1-203ENST00000460962 CGNL1Q0VF96 1302 aa15.65■□□□□ 0.1
GCOM1-203ENST00000460962 CENPJQ9HC77 1338 aaPredicted RBP15.64■□□□□ 0.09
GCOM1-203ENST00000460962 PDE3AQ14432 1141 aa15.64■□□□□ 0.09
GCOM1-203ENST00000460962 KIF1BO60333 1816 aa15.63■□□□□ 0.09
GCOM1-203ENST00000460962 IL27Q8NEV9 243 aa15.63■□□□□ 0.09
GCOM1-203ENST00000460962 POLR3AO14802 1390 aaPredicted RBP15.63■□□□□ 0.09
GCOM1-203ENST00000460962 WWC1Q8IX03 1113 aa15.63■□□□□ 0.09
GCOM1-203ENST00000460962 NINLQ9Y2I6 1382 aa15.62■□□□□ 0.09
GCOM1-203ENST00000460962 GSE1Q14687 1217 aa15.62■□□□□ 0.09
GCOM1-203ENST00000460962 SBNO2Q9Y2G9 1366 aa15.61■□□□□ 0.09
GCOM1-203ENST00000460962 IGHDP01880 384 aa15.61■□□□□ 0.09
GCOM1-203ENST00000460962 ADGRL1O94910 1474 aa15.61■□□□□ 0.09
GCOM1-203ENST00000460962 MORC1Q86VD1 984 aa15.61■□□□□ 0.09
GCOM1-203ENST00000460962 CLUAP1Q96AJ1 413 aa15.61■□□□□ 0.09
GCOM1-203ENST00000460962 ABCA9Q8IUA7 1624 aa15.6■□□□□ 0.09
GCOM1-203ENST00000460962 COG6Q9Y2V7 657 aa15.6■□□□□ 0.09
GCOM1-203ENST00000460962 MROH1Q8NDA8 1641 aa15.6■□□□□ 0.09
GCOM1-203ENST00000460962 PANK1Q8TE04 598 aa15.6■□□□□ 0.09
GCOM1-203ENST00000460962 EFCAB6Q5THR3 1501 aa15.6■□□□□ 0.09
GCOM1-203ENST00000460962 NSD3Q9BZ95 1437 aa15.59■□□□□ 0.09
GCOM1-203ENST00000460962 NEUROD2Q15784 382 aa15.59■□□□□ 0.09
GCOM1-203ENST00000460962 CHGAP10645 457 aaKnown RBP15.59■□□□□ 0.09
GCOM1-203ENST00000460962 TNNT2P45379 298 aaPredicted RBP15.59■□□□□ 0.09
GCOM1-203ENST00000460962 FRAT1Q92837 279 aaPredicted RBP15.59■□□□□ 0.09
GCOM1-203ENST00000460962 MAPK8IP3Q9UPT6 1336 aa15.58■□□□□ 0.09
GCOM1-203ENST00000460962 MYO3AQ8NEV4 1616 aa15.58■□□□□ 0.09
GCOM1-203ENST00000460962 IFT172Q9UG01 1749 aa15.58■□□□□ 0.08
GCOM1-203ENST00000460962 RUNDC1Q96C34 613 aa15.57■□□□□ 0.08
GCOM1-203ENST00000460962 TRAK1Q9UPV9 953 aa15.57■□□□□ 0.08
GCOM1-203ENST00000460962 NOS1P29475 1434 aa15.57■□□□□ 0.08
GCOM1-203ENST00000460962 NRXN1Q9ULB1 1477 aa15.57■□□□□ 0.08
GCOM1-203ENST00000460962 MROH2AA6NES4 1674 aa15.57■□□□□ 0.08
GCOM1-203ENST00000460962 RRP7AQ9Y3A4 280 aaKnown RBP15.57■□□□□ 0.08
GCOM1-203ENST00000460962 RTN4Q9NQC3 1192 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms