RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 TMEM134Q9H6X4 195 aa7.39□□□□□ -1.23
SYPL1-203ENST00000460770 TESPA1A2RU30 521 aaPredicted RBP7.38□□□□□ -1.23
SYPL1-203ENST00000460770 RCCD1A6NED2 376 aa7.37□□□□□ -1.23
SYPL1-203ENST00000460770 PCDHB3Q9Y5E6 796 aa7.37□□□□□ -1.23
SYPL1-203ENST00000460770 COPS2P61201 443 aa7.35□□□□□ -1.23
SYPL1-203ENST00000460770 TMUB1Q9BVT8 246 aa7.35□□□□□ -1.23
SYPL1-203ENST00000460770 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.35□□□□□ -1.23
SYPL1-203ENST00000460770 GNPATO15228 680 aa7.34□□□□□ -1.23
SYPL1-203ENST00000460770 ZPR1O75312 459 aa7.34□□□□□ -1.23
SYPL1-203ENST00000460770 PPP1R18Q6NYC8 613 aa7.34□□□□□ -1.23
SYPL1-203ENST00000460770 V9GY48 417 aaPredicted RBP7.34□□□□□ -1.23
SYPL1-203ENST00000460770 RBM26Q5T8P6 1007 aaKnown RBP7.33□□□□□ -1.24
SYPL1-203ENST00000460770 ZNF516Q92618 1163 aa7.33□□□□□ -1.24
SYPL1-203ENST00000460770 CFHP08603 1231 aa7.32□□□□□ -1.24
SYPL1-203ENST00000460770 PXYLP1Q8TE99 480 aa7.32□□□□□ -1.24
SYPL1-203ENST00000460770 PRKD2Q9BZL6 878 aa7.32□□□□□ -1.24
SYPL1-203ENST00000460770 ACTN4O43707 911 aaKnown RBP7.31□□□□□ -1.24
SYPL1-203ENST00000460770 NR1I2O75469 434 aa7.31□□□□□ -1.24
SYPL1-203ENST00000460770 FAM161AQ3B820 660 aa7.31□□□□□ -1.24
SYPL1-203ENST00000460770 METTL3Q86U44 580 aaKnown RBP7.31□□□□□ -1.24
SYPL1-203ENST00000460770 VSIG10Q8N0Z9 540 aa7.31□□□□□ -1.24
SYPL1-203ENST00000460770 Q6ZNB5 142 aa7.3□□□□□ -1.24
SYPL1-203ENST00000460770 GPIHBP1Q8IV16 184 aa7.3□□□□□ -1.24
SYPL1-203ENST00000460770 BLOC1S3Q6QNY0 202 aa7.29□□□□□ -1.24
SYPL1-203ENST00000460770 SULF1Q8IWU6 871 aa7.29□□□□□ -1.24
SYPL1-203ENST00000460770 DAXXQ9UER7 740 aaPredicted RBP7.28□□□□□ -1.24
SYPL1-203ENST00000460770 GFRA3O60609 400 aa7.27□□□□□ -1.25
SYPL1-203ENST00000460770 NKX2-3Q8TAU0 364 aa7.27□□□□□ -1.25
SYPL1-203ENST00000460770 RDH13Q8NBN7 331 aa7.26□□□□□ -1.25
SYPL1-203ENST00000460770 NRG2O14511 850 aaPredicted RBP7.25□□□□□ -1.25
SYPL1-203ENST00000460770 ADH1BP00325 375 aa7.25□□□□□ -1.25
SYPL1-203ENST00000460770 SLC10A3P09131 477 aa7.25□□□□□ -1.25
SYPL1-203ENST00000460770 KDM2AQ9Y2K7 1162 aa7.25□□□□□ -1.25
SYPL1-203ENST00000460770 ANKLE1Q8NAG6 615 aa7.24□□□□□ -1.25
SYPL1-203ENST00000460770 GPR37O15354 613 aa7.23□□□□□ -1.25
SYPL1-203ENST00000460770 GRIPAP1Q4V328 841 aa7.23□□□□□ -1.25
SYPL1-203ENST00000460770 DDX11L8A8MPP1 907 aa7.22□□□□□ -1.25
SYPL1-203ENST00000460770 RNF223E7ERA6 249 aa7.22□□□□□ -1.25
SYPL1-203ENST00000460770 SLC19A1P41440 591 aa7.22□□□□□ -1.25
SYPL1-203ENST00000460770 PDZRN3Q9UPQ7 1066 aa7.22□□□□□ -1.25
SYPL1-203ENST00000460770 TLL1O43897 1013 aa7.21□□□□□ -1.26
SYPL1-203ENST00000460770 FECHP22830 423 aa7.21□□□□□ -1.26
SYPL1-203ENST00000460770 ATP6V1AP38606 617 aa7.21□□□□□ -1.26
SYPL1-203ENST00000460770 SCUBE3Q8IX30 993 aa7.21□□□□□ -1.26
SYPL1-203ENST00000460770 SLC6A16Q9GZN6 736 aa7.21□□□□□ -1.26
SYPL1-203ENST00000460770 MAP2K5Q13163 448 aa7.2□□□□□ -1.26
SYPL1-203ENST00000460770 SPSB2Q99619 263 aa7.2□□□□□ -1.26
SYPL1-203ENST00000460770 S1PR4O95977 384 aa7.19□□□□□ -1.26
SYPL1-203ENST00000460770 GCGRP47871 477 aa7.18□□□□□ -1.26
SYPL1-203ENST00000460770 TRAF7Q6Q0C0 670 aa7.18□□□□□ -1.26
SYPL1-203ENST00000460770 MINK1Q8N4C8 1332 aaPredicted RBP7.18□□□□□ -1.26
SYPL1-203ENST00000460770 FMNL1O95466 1100 aaPredicted RBP7.17□□□□□ -1.26
SYPL1-203ENST00000460770 FUT2Q10981 343 aa7.17□□□□□ -1.26
SYPL1-203ENST00000460770 PUS10Q3MIT2 529 aaKnown RBP7.17□□□□□ -1.26
SYPL1-203ENST00000460770 SALL2Q9Y467 1007 aaPredicted RBP7.17□□□□□ -1.26
SYPL1-203ENST00000460770 Q3C1V9 767 aa7.16□□□□□ -1.26
SYPL1-203ENST00000460770 MORN1Q5T089 497 aa7.16□□□□□ -1.26
SYPL1-203ENST00000460770 SPRYD7Q5W111 196 aa7.16□□□□□ -1.26
SYPL1-203ENST00000460770 ZNF598Q86UK7 904 aaKnown RBP7.16□□□□□ -1.26
SYPL1-203ENST00000460770 IRF6O14896 467 aa7.15□□□□□ -1.26
SYPL1-203ENST00000460770 KRI1Q8N9T8 703 aaKnown RBP7.15□□□□□ -1.26
SYPL1-203ENST00000460770 USP46P62068 366 aa7.14□□□□□ -1.27
SYPL1-203ENST00000460770 ZNF697Q5TEC3 545 aa7.14□□□□□ -1.27
SYPL1-203ENST00000460770 LMOD2Q6P5Q4 547 aa7.14□□□□□ -1.27
SYPL1-203ENST00000460770 PPEF1O14829 653 aaPredicted RBP7.13□□□□□ -1.27
SYPL1-203ENST00000460770 CD2BP2O95400 341 aaKnown RBP7.13□□□□□ -1.27
SYPL1-203ENST00000460770 RPIAP49247 311 aa7.13□□□□□ -1.27
SYPL1-203ENST00000460770 PRR20EP86478 221 aa7.13□□□□□ -1.27
SYPL1-203ENST00000460770 PRR20CP86479 221 aa7.13□□□□□ -1.27
SYPL1-203ENST00000460770 PRR20DP86480 221 aa7.13□□□□□ -1.27
SYPL1-203ENST00000460770 PRR20BP86481 221 aa7.13□□□□□ -1.27
SYPL1-203ENST00000460770 PRR20AP86496 221 aa7.13□□□□□ -1.27
SYPL1-203ENST00000460770 PKDCCQ504Y2 493 aa7.13□□□□□ -1.27
SYPL1-203ENST00000460770 NLRP7Q8WX94 980 aa7.13□□□□□ -1.27
SYPL1-203ENST00000460770 PHOX2BQ99453 314 aa7.13□□□□□ -1.27
SYPL1-203ENST00000460770 SLC27A5Q9Y2P5 690 aa7.13□□□□□ -1.27
SYPL1-203ENST00000460770 CLCN1P35523 988 aa7.12□□□□□ -1.27
SYPL1-203ENST00000460770 ZBTB24O43167 697 aaPredicted RBP7.11□□□□□ -1.27
SYPL1-203ENST00000460770 KDM4AO75164 1064 aa7.11□□□□□ -1.27
SYPL1-203ENST00000460770 DGAT1O75907 488 aa7.11□□□□□ -1.27
SYPL1-203ENST00000460770 MDM2Q00987 491 aaPredicted RBP7.11□□□□□ -1.27
SYPL1-203ENST00000460770 CD46P15529 392 aa7.1□□□□□ -1.27
SYPL1-203ENST00000460770 MSS51Q4VC12 460 aa7.1□□□□□ -1.27
SYPL1-203ENST00000460770 BRICD5Q6PL45 260 aa7.1□□□□□ -1.27
SYPL1-203ENST00000460770 LIAT1Q6ZQX7 453 aa7.1□□□□□ -1.27
SYPL1-203ENST00000460770 THAP11Q96EK4 314 aa7.1□□□□□ -1.27
SYPL1-203ENST00000460770 GPCPD1Q9NPB8 672 aa7.1□□□□□ -1.27
SYPL1-203ENST00000460770 CCDC102AQ96A19 550 aa7.09□□□□□ -1.27
SYPL1-203ENST00000460770 FCF1Q9Y324 198 aaKnown RBP7.09□□□□□ -1.27
SYPL1-203ENST00000460770 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.07□□□□□ -1.28
SYPL1-203ENST00000460770 NUTM1Q86Y26 1132 aa7.07□□□□□ -1.28
SYPL1-203ENST00000460770 EMID1Q96A84 441 aaPredicted RBP7.07□□□□□ -1.28
SYPL1-203ENST00000460770 TRIM67Q6ZTA4 783 aa7.06□□□□□ -1.28
SYPL1-203ENST00000460770 FAM160A2Q8N612 972 aaPredicted RBP7.06□□□□□ -1.28
SYPL1-203ENST00000460770 USB1Q9BQ65 265 aaKnown RBP7.06□□□□□ -1.28
SYPL1-203ENST00000460770 FAM187AA6NFU0 413 aa7.05□□□□□ -1.28
SYPL1-203ENST00000460770 TNFRSF10AO00220 468 aa7.05□□□□□ -1.28
SYPL1-203ENST00000460770 GDF9O60383 454 aa7.05□□□□□ -1.28
SYPL1-203ENST00000460770 PLA2G2CQ5R387 149 aa7.05□□□□□ -1.28
SYPL1-203ENST00000460770 ZNF787Q6DD87 383 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms