RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 MLECQ14165 292 aa15.24■□□□□ 0.03
CPNE6-202ENST00000460657 CFAP44Q96MT7 982 aa15.24■□□□□ 0.03
CPNE6-202ENST00000460657 SCAPERQ9BY12 1400 aa15.23■□□□□ 0.03
CPNE6-202ENST00000460657 NCLP19338 710 aaKnown RBP15.23■□□□□ 0.03
CPNE6-202ENST00000460657 AAMPQ13685 434 aa15.22■□□□□ 0.03
CPNE6-202ENST00000460657 C14orf37Q86TY3 774 aa15.22■□□□□ 0.03
CPNE6-202ENST00000460657 DNMT1P26358 1616 aaKnown RBP15.22■□□□□ 0.03
CPNE6-202ENST00000460657 GSE1Q14687 1217 aa15.22■□□□□ 0.03
CPNE6-202ENST00000460657 MAGI3Q5TCQ9 1506 aa15.2■□□□□ 0.02
CPNE6-202ENST00000460657 ATP10BO94823 1461 aa15.2■□□□□ 0.02
CPNE6-202ENST00000460657 PZPP20742 1482 aa15.19■□□□□ 0.02
CPNE6-202ENST00000460657 TEX14Q8IWB6 1497 aa15.19■□□□□ 0.02
CPNE6-202ENST00000460657 PANK1Q8TE04 598 aa15.19■□□□□ 0.02
CPNE6-202ENST00000460657 PDE3AQ14432 1141 aa15.18■□□□□ 0.02
CPNE6-202ENST00000460657 DZIP1LQ8IYY4 767 aaKnown RBP15.18■□□□□ 0.02
CPNE6-202ENST00000460657 GLIPR1L2Q4G1C9 344 aa15.18■□□□□ 0.02
CPNE6-202ENST00000460657 TMEM132EQ6IEE7 984 aa15.18■□□□□ 0.02
CPNE6-202ENST00000460657 TCP11L2Q8N4U5 519 aa15.18■□□□□ 0.02
CPNE6-202ENST00000460657 GCC2Q8IWJ2 1684 aa15.17■□□□□ 0.02
CPNE6-202ENST00000460657 MTHFSP49914 203 aa15.17■□□□□ 0.02
CPNE6-202ENST00000460657 LMOD3Q0VAK6 560 aa15.17■□□□□ 0.02
CPNE6-202ENST00000460657 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.17■□□□□ 0.02
CPNE6-202ENST00000460657 DHX29Q7Z478 1369 aaKnown RBP15.17■□□□□ 0.02
CPNE6-202ENST00000460657 DDX19BQ9UMR2 479 aa15.17■□□□□ 0.02
CPNE6-202ENST00000460657 MINK1Q8N4C8 1332 aaPredicted RBP15.17■□□□□ 0.02
CPNE6-202ENST00000460657 GBP4Q96PP9 640 aa15.16■□□□□ 0.02
CPNE6-202ENST00000460657 DISP1Q96F81 1524 aa15.16■□□□□ 0.02
CPNE6-202ENST00000460657 ZBTB7CA1YPR0 619 aa15.16■□□□□ 0.02
CPNE6-202ENST00000460657 SOX12O15370 315 aa15.15■□□□□ 0.02
CPNE6-202ENST00000460657 DIAPH1O60610 1272 aaKnown RBP15.15■□□□□ 0.02
CPNE6-202ENST00000460657 BCAR3O75815 825 aa15.15■□□□□ 0.02
CPNE6-202ENST00000460657 SLFN5Q08AF3 891 aa15.15■□□□□ 0.02
CPNE6-202ENST00000460657 DISP3Q9P2K9 1392 aa15.15■□□□□ 0.02
CPNE6-202ENST00000460657 ARHGEF12Q9NZN5 1544 aa15.15■□□□□ 0.02
CPNE6-202ENST00000460657 RTF1Q92541 710 aaKnown RBP15.15■□□□□ 0.02
CPNE6-202ENST00000460657 SHANK2Q9UPX8 1470 aa15.14■□□□□ 0.01
CPNE6-202ENST00000460657 NFKBIBQ15653 356 aa15.14■□□□□ 0.01
CPNE6-202ENST00000460657 GZF1Q9H116 711 aaPredicted RBP15.14■□□□□ 0.01
CPNE6-202ENST00000460657 SLC12A5Q9H2X9 1139 aa15.14■□□□□ 0.01
CPNE6-202ENST00000460657 PTMSP20962 102 aa15.13■□□□□ 0.01
CPNE6-202ENST00000460657 PBRM1Q86U86 1689 aa15.13■□□□□ 0.01
CPNE6-202ENST00000460657 PRAG1Q86YV5 1406 aa15.13■□□□□ 0.01
CPNE6-202ENST00000460657 RIPK4P57078 832 aa15.13■□□□□ 0.01
CPNE6-202ENST00000460657 ADGRL2O95490 1459 aa15.13■□□□□ 0.01
CPNE6-202ENST00000460657 NINLQ9Y2I6 1382 aa15.13■□□□□ 0.01
CPNE6-202ENST00000460657 PARD3Q8TEW0 1356 aa15.12■□□□□ 0.01
CPNE6-202ENST00000460657 CABP2Q9NPB3 220 aa15.12■□□□□ 0.01
CPNE6-202ENST00000460657 UHRF1BP1Q6BDS2 1440 aa15.12■□□□□ 0.01
CPNE6-202ENST00000460657 GOLGA6L3A6NEY3 463 aa15.11■□□□□ 0.01
CPNE6-202ENST00000460657 APBB1O00213 710 aa15.11■□□□□ 0.01
CPNE6-202ENST00000460657 NAP1L5Q96NT1 182 aaPredicted RBP15.11■□□□□ 0.01
CPNE6-202ENST00000460657 GGNBP2Q9H3C7 697 aa15.11■□□□□ 0.01
CPNE6-202ENST00000460657 FAM135AQ9P2D6 1515 aa15.11■□□□□ 0.01
CPNE6-202ENST00000460657 KIF16BQ96L93 1317 aa15.1■□□□□ 0.01
CPNE6-202ENST00000460657 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
CPNE6-202ENST00000460657 C20orf194Q5TEA3 1177 aa15.09■□□□□ 0.01
CPNE6-202ENST00000460657 SCAF11Q99590 1463 aaKnown RBP15.09■□□□□ 0.01
CPNE6-202ENST00000460657 MCCP23508 829 aa15.09■□□□□ 0.01
CPNE6-202ENST00000460657 SPATA31E1Q6ZUB1 1445 aa15.09■□□□□ 0.01
CPNE6-202ENST00000460657 WDR63Q8IWG1 891 aa15.09■□□□□ 0.01
CPNE6-202ENST00000460657 NUP160Q12769 1436 aa15.08■□□□□ 0.01
CPNE6-202ENST00000460657 ELL2O00472 640 aaPredicted RBP15.08■□□□□ 0.01
CPNE6-202ENST00000460657 ANKRD45Q5TZF3 282 aa15.08■□□□□ 0.01
CPNE6-202ENST00000460657 PLEKHG5O94827 1062 aa15.08■□□□□ 0
CPNE6-202ENST00000460657 DUSP27Q5VZP5 1158 aa15.08■□□□□ 0
CPNE6-202ENST00000460657 TARBP1Q13395 1621 aaKnown RBP15.08■□□□□ 0
CPNE6-202ENST00000460657 COG3Q96JB2 828 aa15.07■□□□□ 0
CPNE6-202ENST00000460657 RPGRIP1LQ68CZ1 1315 aa15.07■□□□□ 0
CPNE6-202ENST00000460657 WWC1Q8IX03 1113 aa15.07■□□□□ 0
CPNE6-202ENST00000460657 HMMRO75330 724 aa15.06■□□□□ 0
CPNE6-202ENST00000460657 DDX11L8A8MPP1 907 aa15.06■□□□□ 0
CPNE6-202ENST00000460657 TESK2Q96S53 571 aa15.06■□□□□ 0
CPNE6-202ENST00000460657 PTMAP06454 111 aaKnown RBP15.05■□□□□ 0
CPNE6-202ENST00000460657 SYCP2Q9BX26 1530 aa15.05■□□□□ 0
CPNE6-202ENST00000460657 EIF4G3O43432 1585 aaKnown RBP15.05■□□□□ 0
CPNE6-202ENST00000460657 PDZRN3Q9UPQ7 1066 aa15.05■□□□□ 0
CPNE6-202ENST00000460657 KDM6BO15054 1643 aa15.05■□□□□ -0
CPNE6-202ENST00000460657 STK31Q9BXU1 1019 aa15.05■□□□□ -0
CPNE6-202ENST00000460657 DUOX2Q9NRD8 1548 aa15.05■□□□□ -0
CPNE6-202ENST00000460657 NSD3Q9BZ95 1437 aa15.05■□□□□ -0
CPNE6-202ENST00000460657 LRPPRCP42704 1394 aaKnown RBP15.04■□□□□ -0
CPNE6-202ENST00000460657 OS9Q13438 667 aaPredicted RBP15.04■□□□□ -0
CPNE6-202ENST00000460657 NKTRP30414 1462 aaKnown RBP15.04■□□□□ -0
CPNE6-202ENST00000460657 EXOSC9Q06265 439 aaKnown RBP15.04■□□□□ -0
CPNE6-202ENST00000460657 CHMP5Q9NZZ3 219 aa15.04■□□□□ -0
CPNE6-202ENST00000460657 CT47B1P0C2W7 299 aaPredicted RBP15.03■□□□□ -0
CPNE6-202ENST00000460657 C22orf23Q9BZE7 217 aa15.03■□□□□ -0
CPNE6-202ENST00000460657 PER1O15534 1290 aaPredicted RBP15.03■□□□□ -0
CPNE6-202ENST00000460657 API5Q9BZZ5 524 aaKnown RBP15.03■□□□□ -0
CPNE6-202ENST00000460657 SKAP1Q86WV1 359 aa15.02■□□□□ -0
CPNE6-202ENST00000460657 ADGRF5Q8IZF2 1346 aa15.02■□□□□ -0
CPNE6-202ENST00000460657 GNAI1P63096 354 aa15.02■□□□□ -0
CPNE6-202ENST00000460657 PLCH2O75038 1416 aa15.02□□□□□ -0.01
CPNE6-202ENST00000460657 RNF123Q5XPI4 1314 aa15.02□□□□□ -0.01
CPNE6-202ENST00000460657 AMER1Q5JTC6 1135 aaPredicted RBP15.02□□□□□ -0.01
CPNE6-202ENST00000460657 FOXD4L1Q9NU39 408 aa15.01□□□□□ -0.01
CPNE6-202ENST00000460657 LNPKQ9C0E8 428 aa15.01□□□□□ -0.01
CPNE6-202ENST00000460657 SLC4A10Q6U841 1118 aa15□□□□□ -0.01
CPNE6-202ENST00000460657 TSR2Q969E8 191 aaKnown RBP15□□□□□ -0.01
CPNE6-202ENST00000460657 EIF2AK4Q9P2K8 1649 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms