RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 NRXN1Q9ULB1 1477 aa24.21■■□□□ 1.47
CDK11A-209ENST00000460465 ADGRF5Q8IZF2 1346 aa24.2■■□□□ 1.46
CDK11A-209ENST00000460465 FBXO31Q5XUX0 539 aaPredicted RBP24.19■■□□□ 1.46
CDK11A-209ENST00000460465 SLC52A1Q9NWF4 448 aa24.19■■□□□ 1.46
CDK11A-209ENST00000460465 ARID4BQ4LE39 1312 aaPredicted RBP24.18■■□□□ 1.46
CDK11A-209ENST00000460465 IDI1Q13907 227 aa24.18■■□□□ 1.46
CDK11A-209ENST00000460465 TMEM131LA2VDJ0 1609 aa24.18■■□□□ 1.46
CDK11A-209ENST00000460465 SPATA31D1Q6ZQQ2 1576 aa24.18■■□□□ 1.46
CDK11A-209ENST00000460465 RPGRIP1LQ68CZ1 1315 aa24.16■■□□□ 1.46
CDK11A-209ENST00000460465 NEXMIFQ5QGS0 1516 aa24.16■■□□□ 1.46
CDK11A-209ENST00000460465 ANP32CO43423 234 aa24.13■■□□□ 1.45
CDK11A-209ENST00000460465 ESF1Q9H501 851 aaKnown RBP24.13■■□□□ 1.45
CDK11A-209ENST00000460465 PIK3C2GO75747 1445 aa24.12■■□□□ 1.45
CDK11A-209ENST00000460465 SCAF11Q99590 1463 aaKnown RBP24.11■■□□□ 1.45
CDK11A-209ENST00000460465 CFAP70Q5T0N1 1121 aa24.11■■□□□ 1.45
CDK11A-209ENST00000460465 ZMYM3Q14202 1370 aa24.1■■□□□ 1.45
CDK11A-209ENST00000460465 POLR3GLQ9BT43 218 aa24.1■■□□□ 1.45
CDK11A-209ENST00000460465 SETBP1Q9Y6X0 1596 aa24.08■■□□□ 1.45
CDK11A-209ENST00000460465 YTHDC1Q96MU7 727 aaKnown RBP24.06■■□□□ 1.44
CDK11A-209ENST00000460465 TESK2Q96S53 571 aa24.06■■□□□ 1.44
CDK11A-209ENST00000460465 VGFO15240 615 aaPredicted RBP24.04■■□□□ 1.44
CDK11A-209ENST00000460465 NUTM2DQ5VT03 806 aaPredicted RBP24.04■■□□□ 1.44
CDK11A-209ENST00000460465 FER1L4A9Z1Z3 1794 aa24.03■■□□□ 1.44
CDK11A-209ENST00000460465 ZFYVE9O95405 1425 aa24.03■■□□□ 1.44
CDK11A-209ENST00000460465 C14orf93Q9H972 538 aaKnown RBP24.02■■□□□ 1.44
CDK11A-209ENST00000460465 EIF3AQ14152 1382 aaKnown RBP24.02■■□□□ 1.44
CDK11A-209ENST00000460465 DISP3Q9P2K9 1392 aa24.02■■□□□ 1.44
CDK11A-209ENST00000460465 ADGRB1O14514 1584 aa24.01■■□□□ 1.43
CDK11A-209ENST00000460465 STAG3Q9UJ98 1225 aa24■■□□□ 1.43
CDK11A-209ENST00000460465 A2ML1A8K2U0 1454 aa24■■□□□ 1.43
CDK11A-209ENST00000460465 MYO3AQ8NEV4 1616 aa23.99■■□□□ 1.43
CDK11A-209ENST00000460465 CCER2I3L3R5 266 aa23.99■■□□□ 1.43
CDK11A-209ENST00000460465 TMF1P82094 1093 aa23.98■■□□□ 1.43
CDK11A-209ENST00000460465 C3P01024 1663 aa23.98■■□□□ 1.43
CDK11A-209ENST00000460465 TNRQ92752 1358 aa23.97■■□□□ 1.43
CDK11A-209ENST00000460465 KDM5AP29375 1690 aaKnown RBP23.94■■□□□ 1.42
CDK11A-209ENST00000460465 CENPBP07199 599 aaPredicted RBP23.92■■□□□ 1.42
CDK11A-209ENST00000460465 TMEM132EQ6IEE7 984 aa23.92■■□□□ 1.42
CDK11A-209ENST00000460465 UBR1Q8IWV7 1749 aa23.92■■□□□ 1.42
CDK11A-209ENST00000460465 RIMS2Q9UQ26 1411 aa23.91■■□□□ 1.42
CDK11A-209ENST00000460465 PRKRIP1Q9H875 184 aaPredicted RBP23.91■■□□□ 1.42
CDK11A-209ENST00000460465 ARHGEF28Q8N1W1 1705 aaKnown RBP23.91■■□□□ 1.42
CDK11A-209ENST00000460465 QRICH2Q9H0J4 1663 aa23.91■■□□□ 1.42
CDK11A-209ENST00000460465 ASXL1Q8IXJ9 1541 aa23.91■■□□□ 1.42
CDK11A-209ENST00000460465 TRAK1Q9UPV9 953 aa23.89■■□□□ 1.41
CDK11A-209ENST00000460465 CEBPAP49715 358 aaPredicted RBP23.88■■□□□ 1.41
CDK11A-209ENST00000460465 SENP3Q9H4L4 574 aaPredicted RBP23.88■■□□□ 1.41
CDK11A-209ENST00000460465 ALKQ9UM73 1620 aa23.88■■□□□ 1.41
CDK11A-209ENST00000460465 CENPJQ9HC77 1338 aaPredicted RBP23.86■■□□□ 1.41
CDK11A-209ENST00000460465 MYOM1P52179 1685 aa23.85■■□□□ 1.41
CDK11A-209ENST00000460465 SBNO2Q9Y2G9 1366 aa23.85■■□□□ 1.41
CDK11A-209ENST00000460465 NLRP1Q9C000 1473 aa23.85■■□□□ 1.41
CDK11A-209ENST00000460465 CDCA8Q53HL2 280 aa23.84■■□□□ 1.41
CDK11A-209ENST00000460465 SETD1AO15047 1707 aaKnown RBP23.84■■□□□ 1.41
CDK11A-209ENST00000460465 RIMS1Q86UR5 1692 aaKnown RBP23.83■■□□□ 1.41
CDK11A-209ENST00000460465 SLC24A1O60721 1099 aa23.83■■□□□ 1.4
CDK11A-209ENST00000460465 NRXN3Q9Y4C0 1643 aa23.81■■□□□ 1.4
CDK11A-209ENST00000460465 PLPPR3Q6T4P5 718 aa23.81■■□□□ 1.4
CDK11A-209ENST00000460465 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.79■■□□□ 1.4
CDK11A-209ENST00000460465 CNGB1Q14028 1251 aaPredicted RBP23.79■■□□□ 1.4
CDK11A-209ENST00000460465 PTPRMP28827 1452 aa23.78■■□□□ 1.4
CDK11A-209ENST00000460465 PANK3Q9H999 370 aa23.78■■□□□ 1.4
CDK11A-209ENST00000460465 TMEM2Q9UHN6 1383 aa23.78■■□□□ 1.4
CDK11A-209ENST00000460465 ADAMTSL3P82987 1691 aa23.78■■□□□ 1.4
CDK11A-209ENST00000460465 YTHDC2Q9H6S0 1430 aaKnown RBP23.77■■□□□ 1.4
CDK11A-209ENST00000460465 PER1O15534 1290 aaPredicted RBP23.76■■□□□ 1.39
CDK11A-209ENST00000460465 CCDC184Q52MB2 194 aa23.76■■□□□ 1.39
CDK11A-209ENST00000460465 STK26Q9P289 416 aa23.76■■□□□ 1.39
CDK11A-209ENST00000460465 HDGFP51858 240 aaKnown RBP23.75■■□□□ 1.39
CDK11A-209ENST00000460465 KTN1Q86UP2 1357 aaKnown RBP23.71■■□□□ 1.39
CDK11A-209ENST00000460465 TULP4Q9NRJ4 1543 aa23.71■■□□□ 1.39
CDK11A-209ENST00000460465 MRS2Q9HD23 443 aa23.7■■□□□ 1.38
CDK11A-209ENST00000460465 SLIT1O75093 1534 aa23.69■■□□□ 1.38
CDK11A-209ENST00000460465 DLC1Q96QB1 1528 aa23.68■■□□□ 1.38
CDK11A-209ENST00000460465 RALBP1Q15311 655 aa23.68■■□□□ 1.38
CDK11A-209ENST00000460465 LRPPRCP42704 1394 aaKnown RBP23.67■■□□□ 1.38
CDK11A-209ENST00000460465 SAFB2Q14151 953 aaKnown RBP eCLIP23.67■■□□□ 1.382e-7■■■□□ 15.1
CDK11A-209ENST00000460465 ARHGAP23Q9P227 1491 aa23.67■■□□□ 1.38
CDK11A-209ENST00000460465 PARD3Q8TEW0 1356 aa23.67■■□□□ 1.38
CDK11A-209ENST00000460465 PRAM1Q96QH2 718 aa23.66■■□□□ 1.38
CDK11A-209ENST00000460465 KNDC1Q76NI1 1749 aa23.66■■□□□ 1.38
CDK11A-209ENST00000460465 CEP170BQ9Y4F5 1589 aaPredicted RBP23.65■■□□□ 1.38
CDK11A-209ENST00000460465 EVC2Q86UK5 1308 aa23.65■■□□□ 1.38
CDK11A-209ENST00000460465 METP08581 1390 aa23.65■■□□□ 1.38
CDK11A-209ENST00000460465 LTKP29376 864 aa23.65■■□□□ 1.38
CDK11A-209ENST00000460465 MYBBP1AQ9BQG0 1328 aaKnown RBP23.64■■□□□ 1.38
CDK11A-209ENST00000460465 PLEKHG1Q9ULL1 1385 aa23.64■■□□□ 1.37
CDK11A-209ENST00000460465 BCANQ96GW7 911 aa23.64■■□□□ 1.37
CDK11A-209ENST00000460465 POGKQ9P215 609 aa23.64■■□□□ 1.37
CDK11A-209ENST00000460465 CC2D1BQ5T0F9 858 aaKnown RBP23.63■■□□□ 1.37
CDK11A-209ENST00000460465 TXNDC2Q86VQ3 553 aa23.62■■□□□ 1.37
CDK11A-209ENST00000460465 KNSTRNQ9Y448 316 aa23.62■■□□□ 1.37
CDK11A-209ENST00000460465 ADAMTS13Q76LX8 1427 aa23.62■■□□□ 1.37
CDK11A-209ENST00000460465 ABCC11Q96J66 1382 aa23.61■■□□□ 1.37
CDK11A-209ENST00000460465 ZNF142P52746 1687 aaPredicted RBP23.61■■□□□ 1.37
CDK11A-209ENST00000460465 THEMISQ8N1K5 641 aaPredicted RBP23.61■■□□□ 1.37
CDK11A-209ENST00000460465 EID1Q9Y6B2 187 aa23.61■■□□□ 1.37
CDK11A-209ENST00000460465 PUS7Q96PZ0 661 aaKnown RBP23.6■■□□□ 1.37
CDK11A-209ENST00000460465 MINK1Q8N4C8 1332 aaPredicted RBP23.6■■□□□ 1.37
CDK11A-209ENST00000460465 FAM9BQ8IZU0 186 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms