RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 SCAF11Q99590 1463 aaKnown RBP11.2□□□□□ -0.62
SFPQ-202ENST00000460428 TESK2Q96S53 571 aa11.2□□□□□ -0.62
SFPQ-202ENST00000460428 SPATA31D1Q6ZQQ2 1576 aa11.2□□□□□ -0.62
SFPQ-202ENST00000460428 ERVK-7P63135 1459 aa11.19□□□□□ -0.62
SFPQ-202ENST00000460428 SLC24A1O60721 1099 aa11.19□□□□□ -0.62
SFPQ-202ENST00000460428 CENPBP07199 599 aaPredicted RBP11.19□□□□□ -0.62
SFPQ-202ENST00000460428 PIK3C2GO75747 1445 aa11.18□□□□□ -0.62
SFPQ-202ENST00000460428 NEXMIFQ5QGS0 1516 aa11.18□□□□□ -0.62
SFPQ-202ENST00000460428 TMEM131LA2VDJ0 1609 aa11.17□□□□□ -0.62
SFPQ-202ENST00000460428 ADGRF5Q8IZF2 1346 aa11.17□□□□□ -0.62
SFPQ-202ENST00000460428 IDI1Q13907 227 aa11.17□□□□□ -0.62
SFPQ-202ENST00000460428 C14orf93Q9H972 538 aaKnown RBP11.17□□□□□ -0.62
SFPQ-202ENST00000460428 PRKRIP1Q9H875 184 aaPredicted RBP11.16□□□□□ -0.62
SFPQ-202ENST00000460428 CLTCQ00610 1675 aaKnown RBP11.16□□□□□ -0.62
SFPQ-202ENST00000460428 VGFO15240 615 aaPredicted RBP11.15□□□□□ -0.62
SFPQ-202ENST00000460428 DNAJC5Q9H3Z4 198 aa11.15□□□□□ -0.62
SFPQ-202ENST00000460428 MYO3AQ8NEV4 1616 aa11.15□□□□□ -0.62
SFPQ-202ENST00000460428 ADGRB1O14514 1584 aa11.15□□□□□ -0.62
SFPQ-202ENST00000460428 CFAP65Q6ZU64 1925 aaKnown RBP11.15□□□□□ -0.62
SFPQ-202ENST00000460428 EIF3AQ14152 1382 aaKnown RBP11.15□□□□□ -0.63
SFPQ-202ENST00000460428 SBNO2Q9Y2G9 1366 aa11.15□□□□□ -0.63
SFPQ-202ENST00000460428 CFAP70Q5T0N1 1121 aa11.14□□□□□ -0.63
SFPQ-202ENST00000460428 KTN1Q86UP2 1357 aaKnown RBP11.14□□□□□ -0.63
SFPQ-202ENST00000460428 TMF1P82094 1093 aa11.13□□□□□ -0.63
SFPQ-202ENST00000460428 ZMYM3Q14202 1370 aa11.13□□□□□ -0.63
SFPQ-202ENST00000460428 KDM5AP29375 1690 aaKnown RBP11.12□□□□□ -0.63
SFPQ-202ENST00000460428 PER1O15534 1290 aaPredicted RBP11.11□□□□□ -0.63
SFPQ-202ENST00000460428 CDCA8Q53HL2 280 aa11.11□□□□□ -0.63
SFPQ-202ENST00000460428 FBXO31Q5XUX0 539 aaPredicted RBP11.11□□□□□ -0.63
SFPQ-202ENST00000460428 DISP3Q9P2K9 1392 aa11.11□□□□□ -0.63
SFPQ-202ENST00000460428 A2ML1A8K2U0 1454 aa11.1□□□□□ -0.63
SFPQ-202ENST00000460428 CHGAP10645 457 aaKnown RBP11.09□□□□□ -0.63
SFPQ-202ENST00000460428 PUS7Q96PZ0 661 aaKnown RBP11.09□□□□□ -0.63
SFPQ-202ENST00000460428 MYO5BQ9ULV0 1848 aa11.09□□□□□ -0.63
SFPQ-202ENST00000460428 RALBP1Q15311 655 aa11.07□□□□□ -0.64
SFPQ-202ENST00000460428 YTHDC1Q96MU7 727 aaKnown RBP11.06□□□□□ -0.64
SFPQ-202ENST00000460428 ESF1Q9H501 851 aaKnown RBP11.06□□□□□ -0.64
SFPQ-202ENST00000460428 MLECQ14165 292 aa11.05□□□□□ -0.64
SFPQ-202ENST00000460428 CENPJQ9HC77 1338 aaPredicted RBP11.05□□□□□ -0.64
SFPQ-202ENST00000460428 ASXL1Q8IXJ9 1541 aa11.04□□□□□ -0.64
SFPQ-202ENST00000460428 PARD3Q8TEW0 1356 aa11.04□□□□□ -0.64
SFPQ-202ENST00000460428 TNRQ92752 1358 aa11.04□□□□□ -0.64
SFPQ-202ENST00000460428 NPC1L1Q9UHC9 1359 aa11.04□□□□□ -0.64
SFPQ-202ENST00000460428 TRHP20396 242 aaPredicted RBP11.04□□□□□ -0.64
SFPQ-202ENST00000460428 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.04□□□□□ -0.64
SFPQ-202ENST00000460428 NLRP1Q9C000 1473 aa11.04□□□□□ -0.64
SFPQ-202ENST00000460428 RIMS2Q9UQ26 1411 aa11.03□□□□□ -0.64
SFPQ-202ENST00000460428 ALKQ9UM73 1620 aa11.03□□□□□ -0.64
SFPQ-202ENST00000460428 AEBP2Q6ZN18 517 aaPredicted RBP11.03□□□□□ -0.64
SFPQ-202ENST00000460428 ARHGEF28Q8N1W1 1705 aaKnown RBP11.03□□□□□ -0.64
SFPQ-202ENST00000460428 MYOM1P52179 1685 aa11.02□□□□□ -0.64
SFPQ-202ENST00000460428 SETD1AO15047 1707 aaKnown RBP11.02□□□□□ -0.65
SFPQ-202ENST00000460428 HDGFP51858 240 aaKnown RBP11.02□□□□□ -0.65
SFPQ-202ENST00000460428 POLR3GLQ9BT43 218 aa11.02□□□□□ -0.65
SFPQ-202ENST00000460428 PANK3Q9H999 370 aa11.02□□□□□ -0.65
SFPQ-202ENST00000460428 DLC1Q96QB1 1528 aa11.02□□□□□ -0.65
SFPQ-202ENST00000460428 BRD4O60885 1362 aaPredicted RBP11.02□□□□□ -0.65
SFPQ-202ENST00000460428 UBR1Q8IWV7 1749 aa11.01□□□□□ -0.65
SFPQ-202ENST00000460428 CCDC184Q52MB2 194 aa11.01□□□□□ -0.65
SFPQ-202ENST00000460428 MYBBP1AQ9BQG0 1328 aaKnown RBP11.01□□□□□ -0.65
SFPQ-202ENST00000460428 QRICH2Q9H0J4 1663 aa11.01□□□□□ -0.65
SFPQ-202ENST00000460428 YTHDC2Q9H6S0 1430 aaKnown RBP11.01□□□□□ -0.65
SFPQ-202ENST00000460428 TMEM132EQ6IEE7 984 aa11□□□□□ -0.65
SFPQ-202ENST00000460428 SIRT1Q96EB6 747 aa11□□□□□ -0.65
SFPQ-202ENST00000460428 STAG3Q9UJ98 1225 aa11□□□□□ -0.65
SFPQ-202ENST00000460428 C3P01024 1663 aa11□□□□□ -0.65
SFPQ-202ENST00000460428 TMEM2Q9UHN6 1383 aa11□□□□□ -0.65
SFPQ-202ENST00000460428 PTPRMP28827 1452 aa11□□□□□ -0.65
SFPQ-202ENST00000460428 NRXN3Q9Y4C0 1643 aa10.99□□□□□ -0.65
SFPQ-202ENST00000460428 FER1L4A9Z1Z3 1794 aa10.99□□□□□ -0.65
SFPQ-202ENST00000460428 TRAK1Q9UPV9 953 aa10.99□□□□□ -0.65
SFPQ-202ENST00000460428 INSRP06213 1382 aa10.99□□□□□ -0.65
SFPQ-202ENST00000460428 ABCC11Q96J66 1382 aa10.99□□□□□ -0.65
SFPQ-202ENST00000460428 AMER1Q5JTC6 1135 aaPredicted RBP10.98□□□□□ -0.65
SFPQ-202ENST00000460428 MRS2Q9HD23 443 aa10.98□□□□□ -0.65
SFPQ-202ENST00000460428 LRPPRCP42704 1394 aaKnown RBP10.98□□□□□ -0.65
SFPQ-202ENST00000460428 ARHGAP23Q9P227 1491 aa10.98□□□□□ -0.65
SFPQ-202ENST00000460428 SLIT1O75093 1534 aa10.98□□□□□ -0.65
SFPQ-202ENST00000460428 NUTM2DQ5VT03 806 aaPredicted RBP10.97□□□□□ -0.65
SFPQ-202ENST00000460428 PNISRQ8TF01 805 aaKnown RBP10.97□□□□□ -0.65
SFPQ-202ENST00000460428 TULP4Q9NRJ4 1543 aa10.96□□□□□ -0.65
SFPQ-202ENST00000460428 TECPR2O15040 1411 aa10.96□□□□□ -0.65
SFPQ-202ENST00000460428 EVC2Q86UK5 1308 aa10.96□□□□□ -0.65
SFPQ-202ENST00000460428 SCAF1Q9H7N4 1312 aaKnown RBP10.96□□□□□ -0.65
SFPQ-202ENST00000460428 NLRP13Q86W25 1043 aa10.96□□□□□ -0.65
SFPQ-202ENST00000460428 KNDC1Q76NI1 1749 aa10.95□□□□□ -0.66
SFPQ-202ENST00000460428 ADAMTSL3P82987 1691 aa10.95□□□□□ -0.66
SFPQ-202ENST00000460428 MED14O60244 1454 aa10.95□□□□□ -0.66
SFPQ-202ENST00000460428 NINLQ9Y2I6 1382 aa10.95□□□□□ -0.66
SFPQ-202ENST00000460428 KNSTRNQ9Y448 316 aa10.95□□□□□ -0.66
SFPQ-202ENST00000460428 FAM135BQ49AJ0 1406 aa10.94□□□□□ -0.66
SFPQ-202ENST00000460428 PLEKHG1Q9ULL1 1385 aa10.94□□□□□ -0.66
SFPQ-202ENST00000460428 USP32Q8NFA0 1604 aa10.94□□□□□ -0.66
SFPQ-202ENST00000460428 ADAMTS13Q76LX8 1427 aa10.93□□□□□ -0.66
SFPQ-202ENST00000460428 TMC1Q8TDI8 760 aa10.93□□□□□ -0.66
SFPQ-202ENST00000460428 CARD14Q9BXL6 1004 aa10.92□□□□□ -0.66
SFPQ-202ENST00000460428 ATAD2Q6PL18 1390 aa10.91□□□□□ -0.66
SFPQ-202ENST00000460428 ZBED9Q6R2W3 1325 aa10.91□□□□□ -0.66
SFPQ-202ENST00000460428 CPS1P31327 1500 aa10.91□□□□□ -0.66
SFPQ-202ENST00000460428 CEBPAP49715 358 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms