RNA–Protein interactions for RNA: ENST00000460314.1

TRAF3IP3-206, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 2

Gene TRAF3IP3, Length 2,601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-206ENST00000460314 PTPRTO14522 1441 aa9.6□□□□□ -0.87
TRAF3IP3-206ENST00000460314 NLRP1Q9C000 1473 aa9.59□□□□□ -0.87
TRAF3IP3-206ENST00000460314 TRPM2O94759 1503 aa9.58□□□□□ -0.88
TRAF3IP3-206ENST00000460314 TNRQ92752 1358 aa9.58□□□□□ -0.88
TRAF3IP3-206ENST00000460314 CEBPAP49715 358 aaPredicted RBP9.57□□□□□ -0.88
TRAF3IP3-206ENST00000460314 MPHOSPH9Q99550 1183 aa9.57□□□□□ -0.88
TRAF3IP3-206ENST00000460314 SLC4A1APQ9BWU0 796 aaKnown RBP9.57□□□□□ -0.88
TRAF3IP3-206ENST00000460314 FGD1P98174 961 aa9.57□□□□□ -0.88
TRAF3IP3-206ENST00000460314 CEP170BQ9Y4F5 1589 aaPredicted RBP9.57□□□□□ -0.88
TRAF3IP3-206ENST00000460314 A2ML1A8K2U0 1454 aa9.56□□□□□ -0.88
TRAF3IP3-206ENST00000460314 UBR1Q8IWV7 1749 aa9.56□□□□□ -0.88
TRAF3IP3-206ENST00000460314 PAK3O75914 559 aaPredicted RBP9.56□□□□□ -0.88
TRAF3IP3-206ENST00000460314 KIF1BO60333 1816 aa9.56□□□□□ -0.88
TRAF3IP3-206ENST00000460314 PKD2Q13563 968 aa9.56□□□□□ -0.88
TRAF3IP3-206ENST00000460314 GLIPR1L2Q4G1C9 344 aa9.56□□□□□ -0.88
TRAF3IP3-206ENST00000460314 FBXO31Q5XUX0 539 aaPredicted RBP9.55□□□□□ -0.88
TRAF3IP3-206ENST00000460314 UHRF1BP1Q6BDS2 1440 aa9.55□□□□□ -0.88
TRAF3IP3-206ENST00000460314 CLTCL1P53675 1640 aa9.55□□□□□ -0.88
TRAF3IP3-206ENST00000460314 PDIA4P13667 645 aaKnown RBP9.55□□□□□ -0.88
TRAF3IP3-206ENST00000460314 RBM10P98175 930 aaKnown RBP9.55□□□□□ -0.88
TRAF3IP3-206ENST00000460314 PLA2R1Q13018 1463 aa9.55□□□□□ -0.88
TRAF3IP3-206ENST00000460314 NEURL4Q96JN8 1562 aa9.55□□□□□ -0.88
TRAF3IP3-206ENST00000460314 ADGRB3O60242 1522 aa9.54□□□□□ -0.88
TRAF3IP3-206ENST00000460314 MYO5BQ9ULV0 1848 aa9.54□□□□□ -0.88
TRAF3IP3-206ENST00000460314 BCL11BQ9C0K0 894 aaPredicted RBP9.54□□□□□ -0.88
TRAF3IP3-206ENST00000460314 SLC52A1Q9NWF4 448 aa9.54□□□□□ -0.88
TRAF3IP3-206ENST00000460314 LMTK3Q96Q04 1460 aa9.54□□□□□ -0.88
TRAF3IP3-206ENST00000460314 TMEM131LA2VDJ0 1609 aa9.54□□□□□ -0.88
TRAF3IP3-206ENST00000460314 NOP58Q9Y2X3 529 aaKnown RBP9.53□□□□□ -0.88
TRAF3IP3-206ENST00000460314 AAMPQ13685 434 aa9.53□□□□□ -0.88
TRAF3IP3-206ENST00000460314 RTL5Q5HYW3 569 aaPredicted RBP9.52□□□□□ -0.88
TRAF3IP3-206ENST00000460314 UGGT1Q9NYU2 1555 aa9.52□□□□□ -0.89
TRAF3IP3-206ENST00000460314 DHX57Q6P158 1386 aaKnown RBP9.52□□□□□ -0.89
TRAF3IP3-206ENST00000460314 ANKRD30BQ9BXX2 1392 aa9.52□□□□□ -0.89
TRAF3IP3-206ENST00000460314 POLR1AO95602 1720 aaPredicted RBP9.51□□□□□ -0.89
TRAF3IP3-206ENST00000460314 SLIT1O75093 1534 aa9.5□□□□□ -0.89
TRAF3IP3-206ENST00000460314 PLPPR3Q6T4P5 718 aa9.5□□□□□ -0.89
TRAF3IP3-206ENST00000460314 ARHGAP23Q9P227 1491 aa9.5□□□□□ -0.89
TRAF3IP3-206ENST00000460314 IDI1Q13907 227 aa9.5□□□□□ -0.89
TRAF3IP3-206ENST00000460314 BRPF3Q9ULD4 1205 aa9.5□□□□□ -0.89
TRAF3IP3-206ENST00000460314 IFT172Q9UG01 1749 aa9.49□□□□□ -0.89
TRAF3IP3-206ENST00000460314 CCDC144AA2RUR9 1427 aa9.49□□□□□ -0.89
TRAF3IP3-206ENST00000460314 PPLO60437 1756 aa9.48□□□□□ -0.89
TRAF3IP3-206ENST00000460314 STRCQ7RTU9 1775 aa9.48□□□□□ -0.89
TRAF3IP3-206ENST00000460314 FOXD1Q16676 465 aa9.48□□□□□ -0.89
TRAF3IP3-206ENST00000460314 THEMISQ8N1K5 641 aaPredicted RBP9.48□□□□□ -0.89
TRAF3IP3-206ENST00000460314 RSPH6AQ9H0K4 717 aa9.47□□□□□ -0.89
TRAF3IP3-206ENST00000460314 SPATA31E1Q6ZUB1 1445 aa9.47□□□□□ -0.89
TRAF3IP3-206ENST00000460314 NEXMIFQ5QGS0 1516 aa9.46□□□□□ -0.9
TRAF3IP3-206ENST00000460314 KLHL34Q8N239 644 aa9.46□□□□□ -0.9
TRAF3IP3-206ENST00000460314 ZFYVE9O95405 1425 aa9.46□□□□□ -0.9
TRAF3IP3-206ENST00000460314 TMEM2Q9UHN6 1383 aa9.45□□□□□ -0.9
TRAF3IP3-206ENST00000460314 C11orf95C9JLR9 678 aaPredicted RBP9.45□□□□□ -0.9
TRAF3IP3-206ENST00000460314 MED14O60244 1454 aa9.45□□□□□ -0.9
TRAF3IP3-206ENST00000460314 RPGRIP1LQ68CZ1 1315 aa9.45□□□□□ -0.9
TRAF3IP3-206ENST00000460314 STAG3Q9UJ98 1225 aa9.44□□□□□ -0.9
TRAF3IP3-206ENST00000460314 IQGAP1P46940 1657 aa9.44□□□□□ -0.9
TRAF3IP3-206ENST00000460314 RIMS2Q9UQ26 1411 aa9.43□□□□□ -0.9
TRAF3IP3-206ENST00000460314 SCAF11Q99590 1463 aaKnown RBP9.43□□□□□ -0.9
TRAF3IP3-206ENST00000460314 HDGFP51858 240 aaKnown RBP9.42□□□□□ -0.9
TRAF3IP3-206ENST00000460314 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRAF3IP3-206ENST00000460314 MYOM2P54296 1465 aa9.42□□□□□ -0.9
TRAF3IP3-206ENST00000460314 DIP2AQ14689 1571 aa9.41□□□□□ -0.9
TRAF3IP3-206ENST00000460314 ANKLE2Q86XL3 938 aa9.41□□□□□ -0.9
TRAF3IP3-206ENST00000460314 STAC3Q96MF2 364 aa9.41□□□□□ -0.9
TRAF3IP3-206ENST00000460314 SETBP1Q9Y6X0 1596 aa9.41□□□□□ -0.9
TRAF3IP3-206ENST00000460314 WASHC2AQ641Q2 1341 aa9.41□□□□□ -0.9
TRAF3IP3-206ENST00000460314 CHGAP10645 457 aaKnown RBP9.41□□□□□ -0.9
TRAF3IP3-206ENST00000460314 EID1Q9Y6B2 187 aa9.41□□□□□ -0.9
TRAF3IP3-206ENST00000460314 PLEKHG1Q9ULL1 1385 aa9.4□□□□□ -0.9
TRAF3IP3-206ENST00000460314 HSPA2P54652 639 aa9.4□□□□□ -0.9
TRAF3IP3-206ENST00000460314 NRXN3Q9Y4C0 1643 aa9.4□□□□□ -0.9
TRAF3IP3-206ENST00000460314 NRXN1Q9ULB1 1477 aa9.4□□□□□ -0.91
TRAF3IP3-206ENST00000460314 NPHP4O75161 1426 aaPredicted RBP9.4□□□□□ -0.91
TRAF3IP3-206ENST00000460314 SETD1AO15047 1707 aaKnown RBP9.4□□□□□ -0.91
TRAF3IP3-206ENST00000460314 LAMC1P11047 1609 aa9.39□□□□□ -0.91
TRAF3IP3-206ENST00000460314 LTKP29376 864 aa9.39□□□□□ -0.91
TRAF3IP3-206ENST00000460314 TXNDC2Q86VQ3 553 aa9.39□□□□□ -0.91
TRAF3IP3-206ENST00000460314 DMRT2Q9Y5R5 561 aa9.39□□□□□ -0.91
TRAF3IP3-206ENST00000460314 KIAA1210Q9ULL0 1709 aa9.39□□□□□ -0.91
TRAF3IP3-206ENST00000460314 IRX6P78412 446 aaPredicted RBP9.38□□□□□ -0.91
TRAF3IP3-206ENST00000460314 ZNF326Q5BKZ1 582 aaKnown RBP9.38□□□□□ -0.91
TRAF3IP3-206ENST00000460314 NCKAP5LQ9HCH0 1330 aa9.38□□□□□ -0.91
TRAF3IP3-206ENST00000460314 VGFO15240 615 aaPredicted RBP9.37□□□□□ -0.91
TRAF3IP3-206ENST00000460314 CHD2O14647 1828 aaKnown RBP9.37□□□□□ -0.91
TRAF3IP3-206ENST00000460314 SIN3AQ96ST3 1273 aa9.36□□□□□ -0.91
TRAF3IP3-206ENST00000460314 PIK3C2GO75747 1445 aa9.36□□□□□ -0.91
TRAF3IP3-206ENST00000460314 ADAMTS13Q76LX8 1427 aa9.36□□□□□ -0.91
TRAF3IP3-206ENST00000460314 ALKQ9UM73 1620 aa9.36□□□□□ -0.91
TRAF3IP3-206ENST00000460314 PPP1R15AO75807 674 aaPredicted RBP9.35□□□□□ -0.91
TRAF3IP3-206ENST00000460314 NWD1Q149M9 1564 aa9.35□□□□□ -0.91
TRAF3IP3-206ENST00000460314 RGL3Q3MIN7 710 aa9.35□□□□□ -0.91
TRAF3IP3-206ENST00000460314 PIK3R4Q99570 1358 aa9.35□□□□□ -0.91
TRAF3IP3-206ENST00000460314 NEFMP07197 916 aa9.34□□□□□ -0.91
TRAF3IP3-206ENST00000460314 ZBTB47Q9UFB7 747 aaPredicted RBP9.34□□□□□ -0.91
TRAF3IP3-206ENST00000460314 TBX22Q9Y458 520 aa9.34□□□□□ -0.91
TRAF3IP3-206ENST00000460314 KNDC1Q76NI1 1749 aa9.33□□□□□ -0.92
TRAF3IP3-206ENST00000460314 TONSLQ96HA7 1378 aa9.33□□□□□ -0.92
TRAF3IP3-206ENST00000460314 HSP90AA2PQ14568 343 aaPredicted RBP9.33□□□□□ -0.92
TRAF3IP3-206ENST00000460314 XRN1Q8IZH2 1706 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms