RNA–Protein interactions for RNA: ENST00000460177.1

LCNL1-203, Transcript of lipocalin like 1, humanhuman

TSL 1 (best)

Gene LCNL1, Length 1,704 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-203ENST00000460177 FBXO31Q5XUX0 539 aaPredicted RBP31.35■■■□□ 2.61
LCNL1-203ENST00000460177 IQGAP1P46940 1657 aa31.35■■■□□ 2.61
LCNL1-203ENST00000460177 NEXMIFQ5QGS0 1516 aa31.35■■■□□ 2.61
LCNL1-203ENST00000460177 CCDC7Q96M83 1385 aa31.33■■■□□ 2.61
LCNL1-203ENST00000460177 IDI1Q13907 227 aa31.32■■■□□ 2.61
LCNL1-203ENST00000460177 C11orf95C9JLR9 678 aaPredicted RBP31.31■■■□□ 2.6
LCNL1-203ENST00000460177 RPGRIP1LQ68CZ1 1315 aa31.3■■■□□ 2.6
LCNL1-203ENST00000460177 ADGRF5Q8IZF2 1346 aa31.3■■■□□ 2.6
LCNL1-203ENST00000460177 ZMYM3Q14202 1370 aa31.29■■■□□ 2.6
LCNL1-203ENST00000460177 ESF1Q9H501 851 aaKnown RBP31.29■■■□□ 2.6
LCNL1-203ENST00000460177 FER1L4A9Z1Z3 1794 aa31.28■■■□□ 2.6
LCNL1-203ENST00000460177 PIK3C2GO75747 1445 aa31.25■■■□□ 2.59
LCNL1-203ENST00000460177 KIF7Q2M1P5 1343 aa31.25■■■□□ 2.59
LCNL1-203ENST00000460177 ST20-MTHFSA0A0A6YYL1 179 aa31.24■■■□□ 2.59
LCNL1-203ENST00000460177 SETBP1Q9Y6X0 1596 aa31.22■■■□□ 2.59
LCNL1-203ENST00000460177 SCAF11Q99590 1463 aaKnown RBP31.2■■■□□ 2.59
LCNL1-203ENST00000460177 C3P01024 1663 aa31.19■■■□□ 2.58
LCNL1-203ENST00000460177 ZFYVE9O95405 1425 aa31.18■■■□□ 2.58
LCNL1-203ENST00000460177 CFAP70Q5T0N1 1121 aa31.16■■■□□ 2.58
LCNL1-203ENST00000460177 A2ML1A8K2U0 1454 aa31.16■■■□□ 2.58
LCNL1-203ENST00000460177 TNRQ92752 1358 aa31.14■■■□□ 2.58
LCNL1-203ENST00000460177 ADGRB1O14514 1584 aa31.13■■■□□ 2.57
LCNL1-203ENST00000460177 KDM5AP29375 1690 aaKnown RBP31.13■■■□□ 2.57
LCNL1-203ENST00000460177 VGFO15240 615 aaPredicted RBP31.1■■■□□ 2.57
LCNL1-203ENST00000460177 MYO3AQ8NEV4 1616 aa31.09■■■□□ 2.57
LCNL1-203ENST00000460177 TESK2Q96S53 571 aa31.09■■■□□ 2.57
LCNL1-203ENST00000460177 C14orf93Q9H972 538 aaKnown RBP31.09■■■□□ 2.57
LCNL1-203ENST00000460177 UBR1Q8IWV7 1749 aa31.07■■■□□ 2.57
LCNL1-203ENST00000460177 ADAMTSL3P82987 1691 aa31.07■■■□□ 2.56
LCNL1-203ENST00000460177 NUTM2DQ5VT03 806 aaPredicted RBP31.07■■■□□ 2.56
LCNL1-203ENST00000460177 EIF3AQ14152 1382 aaKnown RBP31.07■■■□□ 2.56
LCNL1-203ENST00000460177 STAG3Q9UJ98 1225 aa31.07■■■□□ 2.56
LCNL1-203ENST00000460177 RIMS1Q86UR5 1692 aaKnown RBP31.04■■■□□ 2.56
LCNL1-203ENST00000460177 DISP3Q9P2K9 1392 aa31.03■■■□□ 2.56
LCNL1-203ENST00000460177 RIMS2Q9UQ26 1411 aa31.02■■■□□ 2.56
LCNL1-203ENST00000460177 ASXL1Q8IXJ9 1541 aa31.02■■■□□ 2.56
LCNL1-203ENST00000460177 NLRP1Q9C000 1473 aa31.02■■■□□ 2.56
LCNL1-203ENST00000460177 ANP32CO43423 234 aa31■■■□□ 2.55
LCNL1-203ENST00000460177 POLR3GLQ9BT43 218 aa30.99■■■□□ 2.55
LCNL1-203ENST00000460177 CEBPAP49715 358 aaPredicted RBP30.98■■■□□ 2.55
LCNL1-203ENST00000460177 ARHGEF28Q8N1W1 1705 aaKnown RBP30.97■■■□□ 2.55
LCNL1-203ENST00000460177 PLPPR3Q6T4P5 718 aa30.95■■■□□ 2.55
LCNL1-203ENST00000460177 SETD1AO15047 1707 aaKnown RBP30.95■■■□□ 2.55
LCNL1-203ENST00000460177 ALKQ9UM73 1620 aa30.95■■■□□ 2.55
LCNL1-203ENST00000460177 TMF1P82094 1093 aa30.95■■■□□ 2.54
LCNL1-203ENST00000460177 QRICH2Q9H0J4 1663 aa30.94■■■□□ 2.54
LCNL1-203ENST00000460177 NRXN3Q9Y4C0 1643 aa30.93■■■□□ 2.54
LCNL1-203ENST00000460177 TMEM132EQ6IEE7 984 aa30.92■■■□□ 2.54
LCNL1-203ENST00000460177 SBNO2Q9Y2G9 1366 aa30.89■■■□□ 2.54
LCNL1-203ENST00000460177 TMEM2Q9UHN6 1383 aa30.87■■■□□ 2.53
LCNL1-203ENST00000460177 PTPRMP28827 1452 aa30.87■■■□□ 2.53
LCNL1-203ENST00000460177 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.86■■■□□ 2.53
LCNL1-203ENST00000460177 TRAK1Q9UPV9 953 aa30.86■■■□□ 2.53
LCNL1-203ENST00000460177 MYOM1P52179 1685 aa30.85■■■□□ 2.53
LCNL1-203ENST00000460177 CENPJQ9HC77 1338 aaPredicted RBP30.85■■■□□ 2.53
LCNL1-203ENST00000460177 CCER2I3L3R5 266 aa30.84■■■□□ 2.53
LCNL1-203ENST00000460177 SENP3Q9H4L4 574 aaPredicted RBP30.82■■■□□ 2.52
LCNL1-203ENST00000460177 SLIT1O75093 1534 aa30.81■■■□□ 2.52
LCNL1-203ENST00000460177 YTHDC2Q9H6S0 1430 aaKnown RBP30.8■■■□□ 2.52
LCNL1-203ENST00000460177 SLC24A1O60721 1099 aa30.79■■■□□ 2.52
LCNL1-203ENST00000460177 ARHGAP23Q9P227 1491 aa30.79■■■□□ 2.52
LCNL1-203ENST00000460177 CDCA8Q53HL2 280 aa30.78■■■□□ 2.52
LCNL1-203ENST00000460177 CEP170BQ9Y4F5 1589 aaPredicted RBP30.78■■■□□ 2.52
LCNL1-203ENST00000460177 HDGFP51858 240 aaKnown RBP30.77■■■□□ 2.52
LCNL1-203ENST00000460177 PRKRIP1Q9H875 184 aaPredicted RBP30.77■■■□□ 2.52
LCNL1-203ENST00000460177 ZNF142P52746 1687 aaPredicted RBP30.77■■■□□ 2.52
LCNL1-203ENST00000460177 KDM4FA0A1W2PPD8 638 aa30.76■■■□□ 2.52
LCNL1-203ENST00000460177 YTHDC1Q96MU7 727 aaKnown RBP30.76■■■□□ 2.51
LCNL1-203ENST00000460177 DLC1Q96QB1 1528 aa30.73■■■□□ 2.51
LCNL1-203ENST00000460177 KNDC1Q76NI1 1749 aa30.72■■■□□ 2.51
LCNL1-203ENST00000460177 TULP4Q9NRJ4 1543 aa30.71■■■□□ 2.51
LCNL1-203ENST00000460177 PLEKHG1Q9ULL1 1385 aa30.7■■■□□ 2.51
LCNL1-203ENST00000460177 STK26Q9P289 416 aa30.7■■■□□ 2.5
LCNL1-203ENST00000460177 LRPPRCP42704 1394 aaKnown RBP30.69■■■□□ 2.5
LCNL1-203ENST00000460177 ADAMTS13Q76LX8 1427 aa30.67■■■□□ 2.5
LCNL1-203ENST00000460177 LTKP29376 864 aa30.67■■■□□ 2.5
LCNL1-203ENST00000460177 METP08581 1390 aa30.66■■■□□ 2.5
LCNL1-203ENST00000460177 PER1O15534 1290 aaPredicted RBP30.64■■■□□ 2.5
LCNL1-203ENST00000460177 PANK3Q9H999 370 aa30.64■■■□□ 2.5
LCNL1-203ENST00000460177 SETD1BQ9UPS6 1966 aaKnown RBP30.64■■■□□ 2.5
LCNL1-203ENST00000460177 THEMISQ8N1K5 641 aaPredicted RBP30.64■■■□□ 2.5
LCNL1-203ENST00000460177 ABCC11Q96J66 1382 aa30.62■■■□□ 2.49
LCNL1-203ENST00000460177 TXNDC2Q86VQ3 553 aa30.62■■■□□ 2.49
LCNL1-203ENST00000460177 CPS1P31327 1500 aa30.62■■■□□ 2.49
LCNL1-203ENST00000460177 MED14O60244 1454 aa30.62■■■□□ 2.49
LCNL1-203ENST00000460177 EID1Q9Y6B2 187 aa30.61■■■□□ 2.49
LCNL1-203ENST00000460177 PRAM1Q96QH2 718 aa30.6■■■□□ 2.49
LCNL1-203ENST00000460177 TECPR2O15040 1411 aa30.6■■■□□ 2.49
LCNL1-203ENST00000460177 KTN1Q86UP2 1357 aaKnown RBP30.59■■■□□ 2.49
LCNL1-203ENST00000460177 DIP2AQ14689 1571 aa30.58■■■□□ 2.49
LCNL1-203ENST00000460177 EVC2Q86UK5 1308 aa30.58■■■□□ 2.49
LCNL1-203ENST00000460177 SAFB2Q14151 953 aaKnown RBP eCLIP30.57■■■□□ 2.48
LCNL1-203ENST00000460177 CENPBP07199 599 aaPredicted RBP30.56■■■□□ 2.48
LCNL1-203ENST00000460177 BCANQ96GW7 911 aa30.56■■■□□ 2.48
LCNL1-203ENST00000460177 POGKQ9P215 609 aa30.56■■■□□ 2.48
LCNL1-203ENST00000460177 PUS7Q96PZ0 661 aaKnown RBP30.55■■■□□ 2.48
LCNL1-203ENST00000460177 CNGB1Q14028 1251 aaPredicted RBP30.54■■■□□ 2.48
LCNL1-203ENST00000460177 PARD3Q8TEW0 1356 aa30.54■■■□□ 2.48
LCNL1-203ENST00000460177 CCDC184Q52MB2 194 aa30.53■■■□□ 2.48
LCNL1-203ENST00000460177 PLEKHH1Q9ULM0 1364 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms