RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 PDE3BQ13370 1112 aa24.05■■□□□ 1.44
HPS3-202ENST00000460120 NUTM2DQ5VT03 806 aaPredicted RBP24.05■■□□□ 1.44
HPS3-202ENST00000460120 CDCA8Q53HL2 280 aa24.04■■□□□ 1.44
HPS3-202ENST00000460120 SKAP1Q86WV1 359 aa24.04■■□□□ 1.44
HPS3-202ENST00000460120 INO80Q9ULG1 1556 aaPredicted RBP24.02■■□□□ 1.44
HPS3-202ENST00000460120 ABCA9Q8IUA7 1624 aa24.02■■□□□ 1.44
HPS3-202ENST00000460120 BLMP54132 1417 aaPredicted RBP24.01■■□□□ 1.43
HPS3-202ENST00000460120 TET3O43151 1660 aa24.01■■□□□ 1.43
HPS3-202ENST00000460120 CEP152O94986 1710 aa24.01■■□□□ 1.43
HPS3-202ENST00000460120 TRAK1Q9UPV9 953 aa24.01■■□□□ 1.43
HPS3-202ENST00000460120 ARAP3Q8WWN8 1544 aa24■■□□□ 1.43
HPS3-202ENST00000460120 EIF3AQ14152 1382 aaKnown RBP24■■□□□ 1.43
HPS3-202ENST00000460120 TNNT2P45379 298 aaPredicted RBP24■■□□□ 1.43
HPS3-202ENST00000460120 CRBNQ96SW2 442 aa24■■□□□ 1.43
HPS3-202ENST00000460120 IQGAP1P46940 1657 aa24■■□□□ 1.43
HPS3-202ENST00000460120 PRKCSHP14314 528 aaPredicted RBP23.99■■□□□ 1.43
HPS3-202ENST00000460120 C20orf194Q5TEA3 1177 aa23.99■■□□□ 1.43
HPS3-202ENST00000460120 NPM2Q86SE8 214 aaKnown RBP23.99■■□□□ 1.43
HPS3-202ENST00000460120 TMEM132EQ6IEE7 984 aa23.98■■□□□ 1.43
HPS3-202ENST00000460120 DEPDC5O75140 1603 aa23.98■■□□□ 1.43
HPS3-202ENST00000460120 PLEKHH1Q9ULM0 1364 aa23.98■■□□□ 1.43
HPS3-202ENST00000460120 RAPGEF3O95398 923 aa23.95■■□□□ 1.42
HPS3-202ENST00000460120 CARD14Q9BXL6 1004 aa23.95■■□□□ 1.42
HPS3-202ENST00000460120 PAK3O75914 559 aaPredicted RBP23.94■■□□□ 1.42
HPS3-202ENST00000460120 NOS1P29475 1434 aa23.94■■□□□ 1.42
HPS3-202ENST00000460120 MROH1Q8NDA8 1641 aa23.94■■□□□ 1.42
HPS3-202ENST00000460120 CFAP65Q6ZU64 1925 aaKnown RBP23.93■■□□□ 1.42
HPS3-202ENST00000460120 STAC3Q96MF2 364 aa23.92■■□□□ 1.42
HPS3-202ENST00000460120 ASXL1Q8IXJ9 1541 aa23.92■■□□□ 1.42
HPS3-202ENST00000460120 VWDEQ8N2E2 1590 aa23.92■■□□□ 1.42
HPS3-202ENST00000460120 OSCARQ8IYS5 282 aa23.92■■□□□ 1.42
HPS3-202ENST00000460120 APAF1O14727 1248 aa23.91■■□□□ 1.42
HPS3-202ENST00000460120 CD109Q6YHK3 1445 aa23.91■■□□□ 1.42
HPS3-202ENST00000460120 ZMYM4Q5VZL5 1548 aa23.9■■□□□ 1.42
HPS3-202ENST00000460120 ABCA6Q8N139 1617 aa23.9■■□□□ 1.42
HPS3-202ENST00000460120 ANP32AP39687 249 aaKnown RBP23.9■■□□□ 1.42
HPS3-202ENST00000460120 SYNMO15061 1565 aa23.89■■□□□ 1.42
HPS3-202ENST00000460120 NOP58Q9Y2X3 529 aaKnown RBP23.89■■□□□ 1.42
HPS3-202ENST00000460120 KIDINS220Q9ULH0 1771 aa23.89■■□□□ 1.41
HPS3-202ENST00000460120 ERVK-7P63135 1459 aa23.89■■□□□ 1.41
HPS3-202ENST00000460120 SAFB2Q14151 953 aaKnown RBP eCLIP23.89■■□□□ 1.41
HPS3-202ENST00000460120 PPRC1Q5VV67 1664 aaKnown RBP23.88■■□□□ 1.41
HPS3-202ENST00000460120 ZNF518AQ6AHZ1 1483 aa23.88■■□□□ 1.41
HPS3-202ENST00000460120 GOLGA2Q08379 1002 aa23.88■■□□□ 1.41
HPS3-202ENST00000460120 NBR1Q14596 966 aa23.88■■□□□ 1.41
HPS3-202ENST00000460120 EFCAB6Q5THR3 1501 aa23.88■■□□□ 1.41
HPS3-202ENST00000460120 DUSP27Q5VZP5 1158 aa23.88■■□□□ 1.41
HPS3-202ENST00000460120 SLC12A5Q9H2X9 1139 aa23.87■■□□□ 1.41
HPS3-202ENST00000460120 SPINK5Q9NQ38 1064 aaPredicted RBP23.87■■□□□ 1.41
HPS3-202ENST00000460120 CENPJQ9HC77 1338 aaPredicted RBP23.87■■□□□ 1.41
HPS3-202ENST00000460120 MAP3K4Q9Y6R4 1608 aa23.87■■□□□ 1.41
HPS3-202ENST00000460120 MROH2AA6NES4 1674 aa23.86■■□□□ 1.41
HPS3-202ENST00000460120 NEUROD2Q15784 382 aa23.85■■□□□ 1.41
HPS3-202ENST00000460120 MYOM1P52179 1685 aa23.85■■□□□ 1.41
HPS3-202ENST00000460120 NPATQ14207 1427 aa23.84■■□□□ 1.41
HPS3-202ENST00000460120 KDM5AP29375 1690 aaKnown RBP23.83■■□□□ 1.4
HPS3-202ENST00000460120 DMRT2Q9Y5R5 561 aa23.82■■□□□ 1.4
HPS3-202ENST00000460120 KIF1BO60333 1816 aa23.81■■□□□ 1.4
HPS3-202ENST00000460120 MYOM2P54296 1465 aa23.81■■□□□ 1.4
HPS3-202ENST00000460120 PDE4AP27815 886 aa23.8■■□□□ 1.4
HPS3-202ENST00000460120 MORC1Q86VD1 984 aa23.8■■□□□ 1.4
HPS3-202ENST00000460120 RRP7AQ9Y3A4 280 aaKnown RBP23.8■■□□□ 1.4
HPS3-202ENST00000460120 POGZQ7Z3K3 1410 aa23.8■■□□□ 1.4
HPS3-202ENST00000460120 PIK3C2GO75747 1445 aa23.79■■□□□ 1.4
HPS3-202ENST00000460120 IPO9Q96P70 1041 aaKnown RBP23.78■■□□□ 1.4
HPS3-202ENST00000460120 STK26Q9P289 416 aa23.78■■□□□ 1.4
HPS3-202ENST00000460120 INSRP06213 1382 aa23.78■■□□□ 1.4
HPS3-202ENST00000460120 TCERG1O14776 1098 aaKnown RBP23.78■■□□□ 1.4
HPS3-202ENST00000460120 NSD3Q9BZ95 1437 aa23.77■■□□□ 1.4
HPS3-202ENST00000460120 SLFN5Q08AF3 891 aa23.77■■□□□ 1.4
HPS3-202ENST00000460120 ZNF521Q96K83 1311 aa23.77■■□□□ 1.4
HPS3-202ENST00000460120 BCAR3O75815 825 aa23.76■■□□□ 1.39
HPS3-202ENST00000460120 ZBTB47Q9UFB7 747 aaPredicted RBP23.76■■□□□ 1.39
HPS3-202ENST00000460120 C14orf93Q9H972 538 aaKnown RBP23.75■■□□□ 1.39
HPS3-202ENST00000460120 FRMPD1Q5SYB0 1578 aa23.75■■□□□ 1.39
HPS3-202ENST00000460120 KIAA1210Q9ULL0 1709 aa23.72■■□□□ 1.39
HPS3-202ENST00000460120 CABP2Q9NPB3 220 aa23.72■■□□□ 1.39
HPS3-202ENST00000460120 ADGRB3O60242 1522 aa23.72■■□□□ 1.39
HPS3-202ENST00000460120 NPC1L1Q9UHC9 1359 aa23.72■■□□□ 1.39
HPS3-202ENST00000460120 SLC24A1O60721 1099 aa23.7■■□□□ 1.39
HPS3-202ENST00000460120 BACH2Q9BYV9 841 aa23.69■■□□□ 1.38
HPS3-202ENST00000460120 NRXN1Q9ULB1 1477 aa23.68■■□□□ 1.38
HPS3-202ENST00000460120 LMTK2Q8IWU2 1503 aa23.68■■□□□ 1.38
HPS3-202ENST00000460120 IDI1Q13907 227 aa23.68■■□□□ 1.38
HPS3-202ENST00000460120 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.68■■□□□ 1.38
HPS3-202ENST00000460120 HECW2Q9P2P5 1572 aa23.68■■□□□ 1.38
HPS3-202ENST00000460120 IFT172Q9UG01 1749 aa23.68■■□□□ 1.38
HPS3-202ENST00000460120 MLH3Q9UHC1 1453 aa23.67■■□□□ 1.38
HPS3-202ENST00000460120 MTHFSP49914 203 aa23.67■■□□□ 1.38
HPS3-202ENST00000460120 RGS3P49796 1198 aa23.66■■□□□ 1.38
HPS3-202ENST00000460120 ABCC3O15438 1527 aa23.66■■□□□ 1.38
HPS3-202ENST00000460120 CANXP27824 592 aaKnown RBP23.66■■□□□ 1.38
HPS3-202ENST00000460120 CYB5RLQ6IPT4 315 aa23.65■■□□□ 1.38
HPS3-202ENST00000460120 E9PSI1 815 aa23.64■■□□□ 1.38
HPS3-202ENST00000460120 FRAT1Q92837 279 aaPredicted RBP23.64■■□□□ 1.37
HPS3-202ENST00000460120 NEURL4Q96JN8 1562 aa23.64■■□□□ 1.37
HPS3-202ENST00000460120 VGFO15240 615 aaPredicted RBP23.63■■□□□ 1.37
HPS3-202ENST00000460120 WWC1Q8IX03 1113 aa23.63■■□□□ 1.37
HPS3-202ENST00000460120 SRPK2P78362 688 aaKnown RBP23.63■■□□□ 1.37
HPS3-202ENST00000460120 LAS1LQ9Y4W2 734 aaKnown RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms