RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 NEO1Q92859 1461 aa12.48□□□□□ -0.41
NUDCD3-203ENST00000460110 PRDM15P57071 1507 aaPredicted RBP12.48□□□□□ -0.41
NUDCD3-203ENST00000460110 ARAP3Q8WWN8 1544 aa12.48□□□□□ -0.41
NUDCD3-203ENST00000460110 WAPLQ7Z5K2 1190 aa12.48□□□□□ -0.41
NUDCD3-203ENST00000460110 MLH3Q9UHC1 1453 aa12.47□□□□□ -0.41
NUDCD3-203ENST00000460110 SOX12O15370 315 aa12.47□□□□□ -0.41
NUDCD3-203ENST00000460110 C14orf93Q9H972 538 aaKnown RBP12.47□□□□□ -0.41
NUDCD3-203ENST00000460110 IQGAP3Q86VI3 1631 aa12.47□□□□□ -0.41
NUDCD3-203ENST00000460110 UNC13BO14795 1591 aa12.47□□□□□ -0.41
NUDCD3-203ENST00000460110 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.47□□□□□ -0.413e-6■■□□□ 14.4
NUDCD3-203ENST00000460110 TXNDC2Q86VQ3 553 aa12.46□□□□□ -0.41
NUDCD3-203ENST00000460110 PER1O15534 1290 aaPredicted RBP12.46□□□□□ -0.42
NUDCD3-203ENST00000460110 SLC26A8Q96RN1 970 aa12.45□□□□□ -0.42
NUDCD3-203ENST00000460110 ADAMTS8Q9UP79 889 aa12.45□□□□□ -0.42
NUDCD3-203ENST00000460110 B4GALNT3Q6L9W6 998 aa12.45□□□□□ -0.42
NUDCD3-203ENST00000460110 BCORL1Q5H9F3 1711 aa12.45□□□□□ -0.42
NUDCD3-203ENST00000460110 PTPRTO14522 1441 aa12.44□□□□□ -0.42
NUDCD3-203ENST00000460110 SCAF11Q99590 1463 aaKnown RBP12.44□□□□□ -0.42
NUDCD3-203ENST00000460110 KIDINS220Q9ULH0 1771 aa12.44□□□□□ -0.42
NUDCD3-203ENST00000460110 PPP2R1AP30153 589 aa12.44□□□□□ -0.42
NUDCD3-203ENST00000460110 EVC2Q86UK5 1308 aa12.43□□□□□ -0.42
NUDCD3-203ENST00000460110 KDM5CP41229 1560 aa12.43□□□□□ -0.42
NUDCD3-203ENST00000460110 CDCA7LQ96GN5 454 aa12.43□□□□□ -0.42
NUDCD3-203ENST00000460110 ZBED9Q6R2W3 1325 aa12.43□□□□□ -0.42
NUDCD3-203ENST00000460110 E9PCH4 1651 aa12.43□□□□□ -0.42
NUDCD3-203ENST00000460110 U2SURPO15042 1029 aaKnown RBP12.43□□□□□ -0.42
NUDCD3-203ENST00000460110 GGNBP2Q9H3C7 697 aa12.43□□□□□ -0.42
NUDCD3-203ENST00000460110 HECW2Q9P2P5 1572 aa12.42□□□□□ -0.42
NUDCD3-203ENST00000460110 GPRASP1Q5JY77 1395 aa12.42□□□□□ -0.42
NUDCD3-203ENST00000460110 RRP7AQ9Y3A4 280 aaKnown RBP12.42□□□□□ -0.42
NUDCD3-203ENST00000460110 RPGRIP1LQ68CZ1 1315 aa12.42□□□□□ -0.42
NUDCD3-203ENST00000460110 INO80Q9ULG1 1556 aaPredicted RBP12.42□□□□□ -0.42
NUDCD3-203ENST00000460110 SLC24A1O60721 1099 aa12.41□□□□□ -0.42
NUDCD3-203ENST00000460110 CLTCL1P53675 1640 aa12.41□□□□□ -0.42
NUDCD3-203ENST00000460110 CARD14Q9BXL6 1004 aa12.41□□□□□ -0.42
NUDCD3-203ENST00000460110 TRPM2O94759 1503 aa12.4□□□□□ -0.42
NUDCD3-203ENST00000460110 MAGI2Q86UL8 1455 aa12.4□□□□□ -0.42
NUDCD3-203ENST00000460110 HDGFP51858 240 aaKnown RBP12.39□□□□□ -0.43
NUDCD3-203ENST00000460110 CABP1Q9NZU7 370 aa12.39□□□□□ -0.43
NUDCD3-203ENST00000460110 COL17A1Q9UMD9 1497 aaPredicted RBP12.39□□□□□ -0.43
NUDCD3-203ENST00000460110 APAF1O14727 1248 aa12.39□□□□□ -0.43
NUDCD3-203ENST00000460110 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
NUDCD3-203ENST00000460110 BRD4O60885 1362 aaPredicted RBP12.39□□□□□ -0.43
NUDCD3-203ENST00000460110 FBLN1P23142 703 aa12.38□□□□□ -0.43
NUDCD3-203ENST00000460110 AMER1Q5JTC6 1135 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-203ENST00000460110 CDK19Q9BWU1 502 aa12.38□□□□□ -0.43
NUDCD3-203ENST00000460110 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
NUDCD3-203ENST00000460110 NUDCQ9Y266 331 aa12.38□□□□□ -0.43
NUDCD3-203ENST00000460110 U2AF1L5P0DN76 240 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-203ENST00000460110 U2AF1Q01081 240 aaKnown RBP eCLIP12.38□□□□□ -0.43
NUDCD3-203ENST00000460110 ZMYM3Q14202 1370 aa12.38□□□□□ -0.43
NUDCD3-203ENST00000460110 C14orf37Q86TY3 774 aa12.38□□□□□ -0.43
NUDCD3-203ENST00000460110 EID1Q9Y6B2 187 aa12.38□□□□□ -0.43
NUDCD3-203ENST00000460110 PLIN1O60240 522 aa12.37□□□□□ -0.43
NUDCD3-203ENST00000460110 CCDC136Q96JN2 1154 aa12.37□□□□□ -0.43
NUDCD3-203ENST00000460110 ABCC3O15438 1527 aa12.37□□□□□ -0.43
NUDCD3-203ENST00000460110 EFCAB6Q5THR3 1501 aa12.37□□□□□ -0.43
NUDCD3-203ENST00000460110 MTHFSP49914 203 aa12.37□□□□□ -0.43
NUDCD3-203ENST00000460110 TET3O43151 1660 aa12.37□□□□□ -0.43
NUDCD3-203ENST00000460110 ABCA6Q8N139 1617 aa12.37□□□□□ -0.43
NUDCD3-203ENST00000460110 CEP152O94986 1710 aa12.36□□□□□ -0.43
NUDCD3-203ENST00000460110 HDGFL2Q7Z4V5 671 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-203ENST00000460110 CFAP53Q96M91 514 aa12.36□□□□□ -0.43
NUDCD3-203ENST00000460110 TERF2IPQ9NYB0 399 aa12.36□□□□□ -0.43
NUDCD3-203ENST00000460110 CGNL1Q0VF96 1302 aa12.35□□□□□ -0.43
NUDCD3-203ENST00000460110 NCKAP5LQ9HCH0 1330 aa12.35□□□□□ -0.43
NUDCD3-203ENST00000460110 CFAP74Q9C0B2 1584 aa12.35□□□□□ -0.43
NUDCD3-203ENST00000460110 PPRC1Q5VV67 1664 aaKnown RBP12.35□□□□□ -0.43
NUDCD3-203ENST00000460110 FRMPD1Q5SYB0 1578 aa12.34□□□□□ -0.43
NUDCD3-203ENST00000460110 NSD3Q9BZ95 1437 aa12.34□□□□□ -0.43
NUDCD3-203ENST00000460110 ZBTB7CA1YPR0 619 aa12.34□□□□□ -0.43
NUDCD3-203ENST00000460110 SPHKAPQ2M3C7 1700 aa12.34□□□□□ -0.43
NUDCD3-203ENST00000460110 CANXP27824 592 aaKnown RBP12.34□□□□□ -0.43
NUDCD3-203ENST00000460110 RCAN3Q9UKA8 241 aa12.34□□□□□ -0.43
NUDCD3-203ENST00000460110 TRPM1Q7Z4N2 1603 aa12.33□□□□□ -0.44
NUDCD3-203ENST00000460110 RNF17Q9BXT8 1623 aaKnown RBP12.33□□□□□ -0.44
NUDCD3-203ENST00000460110 DIP2CQ9Y2E4 1556 aa12.33□□□□□ -0.44
NUDCD3-203ENST00000460110 PARD3Q8TEW0 1356 aa12.32□□□□□ -0.44
NUDCD3-203ENST00000460110 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.32□□□□□ -0.44
NUDCD3-203ENST00000460110 EIF2AK4Q9P2K8 1649 aaKnown RBP12.32□□□□□ -0.44
NUDCD3-203ENST00000460110 PMFBP1Q8TBY8 1022 aa12.31□□□□□ -0.44
NUDCD3-203ENST00000460110 DIP2BQ9P265 1576 aa12.31□□□□□ -0.44
NUDCD3-203ENST00000460110 MROH1Q8NDA8 1641 aa12.31□□□□□ -0.44
NUDCD3-203ENST00000460110 TNRQ92752 1358 aa12.3□□□□□ -0.44
NUDCD3-203ENST00000460110 LMOD2Q6P5Q4 547 aa12.3□□□□□ -0.44
NUDCD3-203ENST00000460110 PPP4R2Q9NY27 417 aa12.3□□□□□ -0.44
NUDCD3-203ENST00000460110 PPP6R1Q9UPN7 881 aa12.3□□□□□ -0.44
NUDCD3-203ENST00000460110 LAS1LQ9Y4W2 734 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-203ENST00000460110 RIMS2Q9UQ26 1411 aa12.3□□□□□ -0.44
NUDCD3-203ENST00000460110 NEFMP07197 916 aa12.29□□□□□ -0.44
NUDCD3-203ENST00000460110 LTKP29376 864 aa12.29□□□□□ -0.44
NUDCD3-203ENST00000460110 PAK3O75914 559 aaPredicted RBP12.29□□□□□ -0.44
NUDCD3-203ENST00000460110 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
NUDCD3-203ENST00000460110 NUTM2GQ5VZR2 741 aa12.28□□□□□ -0.44
NUDCD3-203ENST00000460110 FRAT1Q92837 279 aaPredicted RBP12.28□□□□□ -0.44
NUDCD3-203ENST00000460110 PIK3C2GO75747 1445 aa12.27□□□□□ -0.44
NUDCD3-203ENST00000460110 PLEKHH1Q9ULM0 1364 aa12.27□□□□□ -0.44
NUDCD3-203ENST00000460110 MADDQ8WXG6 1647 aa12.27□□□□□ -0.44
NUDCD3-203ENST00000460110 ZRANB1Q9UGI0 708 aa12.27□□□□□ -0.44
NUDCD3-203ENST00000460110 KIF1BO60333 1816 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms