RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 CSMD2Q7Z408 3487 aa-0.46□□□□□ -2.48
SNORD54-201ENST00000459159 FBLP22087 321 aaKnown RBP-0.46□□□□□ -2.48
SNORD54-201ENST00000459159 SPG7Q9UQ90 795 aa-0.46□□□□□ -2.48
SNORD54-201ENST00000459159 ALMS1Q8TCU4 4167 aa-0.46□□□□□ -2.48
SNORD54-201ENST00000459159 LOC400499M0QZD8 3231 aa-0.47□□□□□ -2.48
SNORD54-201ENST00000459159 PCNTO95613 3336 aa-0.47□□□□□ -2.48
SNORD54-201ENST00000459159 KRTAP19-1Q8IUB9 90 aa-0.47□□□□□ -2.48
SNORD54-201ENST00000459159 SSUH2Q9Y2M2 353 aa-0.47□□□□□ -2.48
SNORD54-201ENST00000459159 ZC3H4Q9UPT8 1303 aaKnown RBP-0.47□□□□□ -2.48
SNORD54-201ENST00000459159 TPRP12270 2363 aaKnown RBP-0.47□□□□□ -2.49
SNORD54-201ENST00000459159 VPS13BQ7Z7G8 4022 aa-0.48□□□□□ -2.49
SNORD54-201ENST00000459159 SDK1Q7Z5N4 2213 aa-0.48□□□□□ -2.49
SNORD54-201ENST00000459159 SHISA5Q8N114 240 aa-0.48□□□□□ -2.49
SNORD54-201ENST00000459159 ERBB3P21860 1342 aa-0.48□□□□□ -2.49
SNORD54-201ENST00000459159 SVEP1Q4LDE5 3571 aa-0.48□□□□□ -2.49
SNORD54-201ENST00000459159 MUC17Q685J3 4493 aa-0.48□□□□□ -2.49
SNORD54-201ENST00000459159 LRBAP50851 2863 aa-0.48□□□□□ -2.49
SNORD54-201ENST00000459159 KRTAP1-4P0C5Y4 121 aa-0.49□□□□□ -2.49
SNORD54-201ENST00000459159 KRTAP19-4Q3LI73 84 aa-0.49□□□□□ -2.49
SNORD54-201ENST00000459159 ANKS1AQ92625 1134 aa-0.49□□□□□ -2.49
SNORD54-201ENST00000459159 PRRC2AP48634 2157 aaKnown RBP-0.49□□□□□ -2.49
SNORD54-201ENST00000459159 CELSR2Q9HCU4 2923 aa-0.49□□□□□ -2.49
SNORD54-201ENST00000459159 TRIOO75962 3097 aa-0.49□□□□□ -2.49
SNORD54-201ENST00000459159 SZT2Q5T011 3432 aa-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 CENPEQ02224 2701 aa-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 CRYBG3Q68DQ2 2970 aa-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 PRB3Q04118 309 aaPredicted RBP-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 KCTD2Q14681 263 aa-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 COL13A1Q5TAT6 717 aaPredicted RBP-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 POTEDQ86YR6 584 aa-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 SERBP1Q8NC51 408 aaKnown RBP eCLIP-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 FZD8Q9H461 694 aa-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 PLSCR2Q9NRY7 297 aa-0.5□□□□□ -2.49
SNORD54-201ENST00000459159 CEP290O15078 2479 aa-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 SPRR2DP22532 72 aa-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 SLC51AQ86UW1 340 aa-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 TMEM151BQ8IW70 566 aa-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 PELP1Q8IZL8 1130 aaKnown RBP-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 BMPERQ8N8U9 685 aa-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 C5orf42Q9H799 3197 aa-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 CHD7Q9P2D1 2997 aa-0.51□□□□□ -2.49
SNORD54-201ENST00000459159 LCE2BO14633 110 aa-0.52□□□□□ -2.49
SNORD54-201ENST00000459159 ERBB2P04626 1255 aa-0.52□□□□□ -2.49
SNORD54-201ENST00000459159 KRTAP10-1P60331 282 aa-0.52□□□□□ -2.49
SNORD54-201ENST00000459159 WNK2Q9Y3S1 2297 aa-0.52□□□□□ -2.49
SNORD54-201ENST00000459159 CFAP47Q6ZTR5 3102 aa-0.52□□□□□ -2.49
SNORD54-201ENST00000459159 APOBP04114 4563 aaKnown RBP-0.52□□□□□ -2.49
SNORD54-201ENST00000459159 POTECB2RU33 542 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 PPP1R11O60927 126 aaPredicted RBP-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 ADAMTS4O75173 837 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 SPRR2EP22531 72 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 SPRR2BP35325 72 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 SPRR2AP35326 72 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 SNX27Q96L92 541 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 NTN4Q9HB63 628 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 WNK1Q9H4A3 2382 aa-0.53□□□□□ -2.49
SNORD54-201ENST00000459159 SOCS7O14512 581 aa-0.54□□□□□ -2.5
SNORD54-201ENST00000459159 CPSF6Q16630 551 aaKnown RBP eCLIP-0.54□□□□□ -2.5
SNORD54-201ENST00000459159 SPAG8Q99932 426 aaPredicted RBP-0.54□□□□□ -2.5
SNORD54-201ENST00000459159 COL25A1Q9BXS0 654 aaPredicted RBP-0.54□□□□□ -2.5
SNORD54-201ENST00000459159 ZNF282Q9UDV7 671 aaPredicted RBP-0.54□□□□□ -2.5
SNORD54-201ENST00000459159 RELNP78509 3460 aa-0.54□□□□□ -2.5
SNORD54-201ENST00000459159 PLECQ15149 4684 aaKnown RBP-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 CEP350Q5VT06 3117 aa-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 KRTAP19-7Q3SYF9 63 aa-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 KRT35Q92764 455 aa-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 RAPGEFL1Q9UHV5 662 aa-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 TNFRSF18Q9Y5U5 241 aa-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 DNAH5Q8TE73 4624 aa-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 WDFY3Q8IZQ1 3526 aa-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 PTPRZ1P23471 2315 aaPredicted RBP-0.55□□□□□ -2.5
SNORD54-201ENST00000459159 ADGRG4Q8IZF6 3080 aa-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 DCHS2Q6V1P9 2916 aa-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 CYSRT1A8MQ03 144 aa-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 SNRPNP63162 240 aaKnown RBP-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 TPRNQ4KMQ1 711 aa-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 SCRT2Q9NQ03 307 aa-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 COL3A1P02461 1466 aaPredicted RBP-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 DNAH3Q8TD57 4116 aa-0.56□□□□□ -2.5
SNORD54-201ENST00000459159 F8P00451 2351 aa-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 PRB2P02812 416 aaPredicted RBP-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 SMCPP49901 116 aaPredicted RBP-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 DDX50Q9BQ39 737 aaKnown RBP-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 TMEM79Q9BSE2 394 aa-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 STRN4Q9NRL3 753 aa-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 CEP250Q9BV73 2442 aa-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 VCANP13611 3396 aa-0.57□□□□□ -2.5
SNORD54-201ENST00000459159 PKHD1L1Q86WI1 4243 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 ABCA4P78363 2273 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 PTGS2P35354 604 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 TCTN1Q2MV58 587 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 ZNF746Q6NUN9 644 aaPredicted RBP-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 AEBP2Q6ZN18 517 aaPredicted RBP-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 GRINAQ7Z429 371 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 GDF7Q7Z4P5 450 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 MDFIQ99750 246 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 EGFL7Q9UHF1 273 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 PPP6R1Q9UPN7 881 aa-0.58□□□□□ -2.5
SNORD54-201ENST00000459159 PKHD1P08F94 4074 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms