RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 SLC4A3P48751 1232 aa7.02□□□□□ -1.29
SCARNA18-201ENST00000459004 DAXXQ9UER7 740 aaPredicted RBP7.02□□□□□ -1.29
SCARNA18-201ENST00000459004 PRKCSHP14314 528 aaPredicted RBP7.01□□□□□ -1.29
SCARNA18-201ENST00000459004 THSD4Q6ZMP0 1018 aa7.01□□□□□ -1.29
SCARNA18-201ENST00000459004 SLF2Q8IX21 1173 aa7.01□□□□□ -1.29
SCARNA18-201ENST00000459004 CLCN1P35523 988 aa7□□□□□ -1.29
SCARNA18-201ENST00000459004 BCAMP50895 628 aa7□□□□□ -1.29
SCARNA18-201ENST00000459004 AMHR2Q16671 573 aa7□□□□□ -1.29
SCARNA18-201ENST00000459004 NLRP7Q8WX94 980 aa7□□□□□ -1.29
SCARNA18-201ENST00000459004 MDM2Q00987 491 aaPredicted RBP6.99□□□□□ -1.29
SCARNA18-201ENST00000459004 NECTIN2Q92692 538 aa6.99□□□□□ -1.29
SCARNA18-201ENST00000459004 GPCPD1Q9NPB8 672 aa6.99□□□□□ -1.29
SCARNA18-201ENST00000459004 TSR3Q9UJK0 312 aaKnown RBP6.99□□□□□ -1.29
SCARNA18-201ENST00000459004 RNF40O75150 1001 aa6.98□□□□□ -1.29
SCARNA18-201ENST00000459004 PTPN5P54829 565 aa6.98□□□□□ -1.29
SCARNA18-201ENST00000459004 PPP4CP60510 307 aa6.98□□□□□ -1.29
SCARNA18-201ENST00000459004 PDE4DQ08499 809 aa6.98□□□□□ -1.29
SCARNA18-201ENST00000459004 TMUB1Q9BVT8 246 aa6.98□□□□□ -1.29
SCARNA18-201ENST00000459004 HPS5Q9UPZ3 1129 aa6.98□□□□□ -1.29
SCARNA18-201ENST00000459004 RSPH4AQ5TD94 716 aa6.97□□□□□ -1.29
SCARNA18-201ENST00000459004 SULF1Q8IWU6 871 aa6.97□□□□□ -1.29
SCARNA18-201ENST00000459004 HCSTQ9UBK5 93 aa6.97□□□□□ -1.29
SCARNA18-201ENST00000459004 TTLL12Q14166 644 aaPredicted RBP6.96□□□□□ -1.3
SCARNA18-201ENST00000459004 REPIN1Q9BWE0 567 aaKnown RBP6.96□□□□□ -1.3
SCARNA18-201ENST00000459004 DDX11L8A8MPP1 907 aa6.95□□□□□ -1.3
SCARNA18-201ENST00000459004 NYAP1Q6ZVC0 841 aa6.95□□□□□ -1.3
SCARNA18-201ENST00000459004 PLSCR2Q9NRY7 297 aa6.95□□□□□ -1.3
SCARNA18-201ENST00000459004 WBP1LQ9NX94 342 aa6.95□□□□□ -1.3
SCARNA18-201ENST00000459004 SLC10A3P09131 477 aa6.94□□□□□ -1.3
SCARNA18-201ENST00000459004 GIGYF2Q6Y7W6 1299 aaKnown RBP6.94□□□□□ -1.3
SCARNA18-201ENST00000459004 PARP9Q8IXQ6 854 aa6.94□□□□□ -1.3
SCARNA18-201ENST00000459004 FAM217BQ9NTX9 383 aaPredicted RBP6.94□□□□□ -1.3
SCARNA18-201ENST00000459004 SSTR3P32745 418 aaPredicted RBP6.93□□□□□ -1.3
SCARNA18-201ENST00000459004 RDH13Q8NBN7 331 aa6.93□□□□□ -1.3
SCARNA18-201ENST00000459004 PRR14Q9BWN1 585 aa6.93□□□□□ -1.3
SCARNA18-201ENST00000459004 CD46P15529 392 aa6.92□□□□□ -1.3
SCARNA18-201ENST00000459004 KMT5BQ4FZB7 885 aa6.92□□□□□ -1.3
SCARNA18-201ENST00000459004 GCGRP47871 477 aa6.91□□□□□ -1.3
SCARNA18-201ENST00000459004 CFHP08603 1231 aa6.9□□□□□ -1.3
SCARNA18-201ENST00000459004 APLP1P51693 650 aa6.9□□□□□ -1.3
SCARNA18-201ENST00000459004 ACTN4O43707 911 aaKnown RBP6.89□□□□□ -1.31
SCARNA18-201ENST00000459004 MS4A1P11836 297 aa6.89□□□□□ -1.31
SCARNA18-201ENST00000459004 NEUROD2Q15784 382 aa6.89□□□□□ -1.31
SCARNA18-201ENST00000459004 KDM4CQ9H3R0 1056 aa6.88□□□□□ -1.31
SCARNA18-201ENST00000459004 GPBP1L1Q9HC44 474 aaPredicted RBP6.88□□□□□ -1.31
SCARNA18-201ENST00000459004 BRPF1P55201 1214 aaPredicted RBP6.87□□□□□ -1.31
SCARNA18-201ENST00000459004 BEGAINQ9BUH8 593 aa6.87□□□□□ -1.31
SCARNA18-201ENST00000459004 KDM4AO75164 1064 aa6.86□□□□□ -1.31
SCARNA18-201ENST00000459004 PCDHB3Q9Y5E6 796 aa6.86□□□□□ -1.31
SCARNA18-201ENST00000459004 ATP6V1AP38606 617 aa6.85□□□□□ -1.31
SCARNA18-201ENST00000459004 USP46P62068 366 aa6.85□□□□□ -1.31
SCARNA18-201ENST00000459004 DIXDC1Q155Q3 683 aa6.85□□□□□ -1.31
SCARNA18-201ENST00000459004 GRIPAP1Q4V328 841 aa6.85□□□□□ -1.31
SCARNA18-201ENST00000459004 NUTM1Q86Y26 1132 aa6.85□□□□□ -1.31
SCARNA18-201ENST00000459004 FUT2Q10981 343 aa6.84□□□□□ -1.31
SCARNA18-201ENST00000459004 SPIRE2Q8WWL2 714 aa6.84□□□□□ -1.31
SCARNA18-201ENST00000459004 DDRGK1Q96HY6 314 aa6.84□□□□□ -1.31
SCARNA18-201ENST00000459004 TJAP1Q5JTD0 557 aa6.83□□□□□ -1.32
SCARNA18-201ENST00000459004 MTRQ99707 1265 aa6.83□□□□□ -1.32
SCARNA18-201ENST00000459004 IL21Q9HBE4 155 aa6.83□□□□□ -1.32
SCARNA18-201ENST00000459004 NR1I2O75469 434 aa6.82□□□□□ -1.32
SCARNA18-201ENST00000459004 ITGBL1O95965 494 aaPredicted RBP6.82□□□□□ -1.32
SCARNA18-201ENST00000459004 COPS2P61201 443 aa6.82□□□□□ -1.32
SCARNA18-201ENST00000459004 PUS10Q3MIT2 529 aaKnown RBP6.82□□□□□ -1.32
SCARNA18-201ENST00000459004 MORN1Q5T089 497 aa6.82□□□□□ -1.32
SCARNA18-201ENST00000459004 BLOC1S3Q6QNY0 202 aa6.82□□□□□ -1.32
SCARNA18-201ENST00000459004 TBC1D2Q9BYX2 928 aa6.82□□□□□ -1.32
SCARNA18-201ENST00000459004 FAM117AQ9C073 453 aa6.82□□□□□ -1.32
SCARNA18-201ENST00000459004 HOXA2O43364 376 aa6.81□□□□□ -1.32
SCARNA18-201ENST00000459004 KCNC4Q03721 635 aa6.81□□□□□ -1.32
SCARNA18-201ENST00000459004 RSPH6AQ9H0K4 717 aa6.81□□□□□ -1.32
SCARNA18-201ENST00000459004 ZPR1O75312 459 aa6.8□□□□□ -1.32
SCARNA18-201ENST00000459004 SCUBE3Q8IX30 993 aa6.8□□□□□ -1.32
SCARNA18-201ENST00000459004 PLEKHG3A1L390 1219 aa6.79□□□□□ -1.32
SCARNA18-201ENST00000459004 IFFO2Q5TF58 517 aa6.79□□□□□ -1.32
SCARNA18-201ENST00000459004 IL27Q8NEV9 243 aa6.79□□□□□ -1.32
SCARNA18-201ENST00000459004 ZNF516Q92618 1163 aa6.79□□□□□ -1.32
SCARNA18-201ENST00000459004 PLA2G2EQ9NZK7 142 aa6.79□□□□□ -1.32
SCARNA18-201ENST00000459004 SLC27A5Q9Y2P5 690 aa6.79□□□□□ -1.32
SCARNA18-201ENST00000459004 MOXD2PA6NHM9 499 aa6.78□□□□□ -1.32
SCARNA18-201ENST00000459004 GJA5P36382 358 aa6.78□□□□□ -1.32
SCARNA18-201ENST00000459004 SALL2Q9Y467 1007 aaPredicted RBP6.78□□□□□ -1.32
SCARNA18-201ENST00000459004 SPTLC1O15269 473 aa6.77□□□□□ -1.33
SCARNA18-201ENST00000459004 FDX1P10109 184 aa6.77□□□□□ -1.33
SCARNA18-201ENST00000459004 NDUFV2P19404 249 aa6.77□□□□□ -1.33
SCARNA18-201ENST00000459004 Q3C1V9 767 aa6.77□□□□□ -1.33
SCARNA18-201ENST00000459004 MYSM1Q5VVJ2 828 aa6.77□□□□□ -1.33
SCARNA18-201ENST00000459004 RIC3Q7Z5B4 369 aa6.77□□□□□ -1.33
SCARNA18-201ENST00000459004 HLA-CQ95604 372 aa6.77□□□□□ -1.33
SCARNA18-201ENST00000459004 FMNL1O95466 1100 aaPredicted RBP6.76□□□□□ -1.33
SCARNA18-201ENST00000459004 SKIV2LQ15477 1246 aaKnown RBP6.76□□□□□ -1.33
SCARNA18-201ENST00000459004 SH3D19Q5HYK7 790 aa6.76□□□□□ -1.33
SCARNA18-201ENST00000459004 RSBN1LQ6PCB5 846 aaPredicted RBP6.76□□□□□ -1.33
SCARNA18-201ENST00000459004 BRICD5Q6PL45 260 aa6.76□□□□□ -1.33
SCARNA18-201ENST00000459004 THAP11Q96EK4 314 aa6.76□□□□□ -1.33
SCARNA18-201ENST00000459004 GUCA2AQ02747 115 aa6.75□□□□□ -1.33
SCARNA18-201ENST00000459004 TUSC1Q2TAM9 212 aa6.75□□□□□ -1.33
SCARNA18-201ENST00000459004 ADH1BP00325 375 aa6.74□□□□□ -1.33
SCARNA18-201ENST00000459004 CLK2P49760 499 aaKnown RBP6.74□□□□□ -1.33
SCARNA18-201ENST00000459004 RNF19BQ6ZMZ0 732 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms