RNA–Protein interactions for RNA: ENST00000458646.1

RARB-204, Transcript of retinoic acid receptor beta, humanhuman

TSL 1 (best) BASIC

Gene RARB, Length 2,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-204ENST00000458646 ADAMTS8Q9UP79 889 aa8.68□□□□□ -1.02
RARB-204ENST00000458646 TRPM2O94759 1503 aa8.68□□□□□ -1.02
RARB-204ENST00000458646 ASXL1Q8IXJ9 1541 aa8.68□□□□□ -1.02
RARB-204ENST00000458646 TMF1P82094 1093 aa8.67□□□□□ -1.02
RARB-204ENST00000458646 C8orf34Q49A92 452 aa8.67□□□□□ -1.02
RARB-204ENST00000458646 DDRGK1Q96HY6 314 aa8.67□□□□□ -1.02
RARB-204ENST00000458646 PIK3C2GO75747 1445 aa8.67□□□□□ -1.02
RARB-204ENST00000458646 AMER1Q5JTC6 1135 aaPredicted RBP8.67□□□□□ -1.02
RARB-204ENST00000458646 RSPH4AQ5TD94 716 aa8.67□□□□□ -1.02
RARB-204ENST00000458646 CLTCL1P53675 1640 aa8.67□□□□□ -1.02
RARB-204ENST00000458646 SHROOM2Q13796 1616 aa8.67□□□□□ -1.02
RARB-204ENST00000458646 PPP2R1AP30153 589 aa8.67□□□□□ -1.02
RARB-204ENST00000458646 CENPQQ7L2Z9 268 aaPredicted RBP8.67□□□□□ -1.02
RARB-204ENST00000458646 ABCC1P33527 1531 aa8.66□□□□□ -1.02
RARB-204ENST00000458646 KDM5AP29375 1690 aaKnown RBP8.65□□□□□ -1.02
RARB-204ENST00000458646 DEPDC5O75140 1603 aa8.65□□□□□ -1.02
RARB-204ENST00000458646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.65□□□□□ -1.02
RARB-204ENST00000458646 SCAF11Q99590 1463 aaKnown RBP8.65□□□□□ -1.02
RARB-204ENST00000458646 EIF3AQ14152 1382 aaKnown RBP8.65□□□□□ -1.03
RARB-204ENST00000458646 NFKBIBQ15653 356 aa8.65□□□□□ -1.03
RARB-204ENST00000458646 ANO8Q9HCE9 1232 aaPredicted RBP8.65□□□□□ -1.03
RARB-204ENST00000458646 CHD1O14646 1710 aa8.64□□□□□ -1.03
RARB-204ENST00000458646 KIAA1210Q9ULL0 1709 aa8.64□□□□□ -1.03
RARB-204ENST00000458646 SCAPERQ9BY12 1400 aa8.64□□□□□ -1.03
RARB-204ENST00000458646 NPC1L1Q9UHC9 1359 aa8.64□□□□□ -1.03
RARB-204ENST00000458646 SLC4A3P48751 1232 aa8.64□□□□□ -1.03
RARB-204ENST00000458646 FAM161AQ3B820 660 aa8.64□□□□□ -1.03
RARB-204ENST00000458646 TRMT2AQ8IZ69 625 aaKnown RBP8.64□□□□□ -1.03
RARB-204ENST00000458646 RTN4Q9NQC3 1192 aaKnown RBP8.64□□□□□ -1.03
RARB-204ENST00000458646 NKTRP30414 1462 aaKnown RBP8.63□□□□□ -1.03
RARB-204ENST00000458646 ZFYVE16Q7Z3T8 1539 aa8.63□□□□□ -1.03
RARB-204ENST00000458646 ERCC6L2Q5T890 1561 aa8.63□□□□□ -1.03
RARB-204ENST00000458646 GOLGA2Q08379 1002 aa8.63□□□□□ -1.03
RARB-204ENST00000458646 SLFN5Q08AF3 891 aa8.63□□□□□ -1.03
RARB-204ENST00000458646 PTPRTO14522 1441 aa8.62□□□□□ -1.03
RARB-204ENST00000458646 ABCA6Q8N139 1617 aa8.62□□□□□ -1.03
RARB-204ENST00000458646 SPINK5Q9NQ38 1064 aaPredicted RBP8.62□□□□□ -1.03
RARB-204ENST00000458646 NLRP1Q9C000 1473 aa8.62□□□□□ -1.03
RARB-204ENST00000458646 TET3O43151 1660 aa8.62□□□□□ -1.03
RARB-204ENST00000458646 SHPRHQ149N8 1683 aa8.62□□□□□ -1.03
RARB-204ENST00000458646 GSE1Q14687 1217 aa8.62□□□□□ -1.03
RARB-204ENST00000458646 WDR43Q15061 677 aaKnown RBP eCLIP8.62□□□□□ -1.03
RARB-204ENST00000458646 BRPF3Q9ULD4 1205 aa8.62□□□□□ -1.03
RARB-204ENST00000458646 KNSTRNQ9Y448 316 aa8.61□□□□□ -1.03
RARB-204ENST00000458646 VWDEQ8N2E2 1590 aa8.61□□□□□ -1.03
RARB-204ENST00000458646 NEURL4Q96JN8 1562 aa8.61□□□□□ -1.03
RARB-204ENST00000458646 IFT172Q9UG01 1749 aa8.61□□□□□ -1.03
RARB-204ENST00000458646 TRAPPC8Q9Y2L5 1435 aa8.6□□□□□ -1.03
RARB-204ENST00000458646 ERVK-7P63135 1459 aa8.6□□□□□ -1.03
RARB-204ENST00000458646 ZCCHC11Q5TAX3 1644 aaKnown RBP8.6□□□□□ -1.03
RARB-204ENST00000458646 MYO3AQ8NEV4 1616 aa8.6□□□□□ -1.03
RARB-204ENST00000458646 USP19O94966 1318 aa8.6□□□□□ -1.03
RARB-204ENST00000458646 FRAT1Q92837 279 aaPredicted RBP8.6□□□□□ -1.03
RARB-204ENST00000458646 PLCH2O75038 1416 aa8.59□□□□□ -1.03
RARB-204ENST00000458646 MAP3K4Q9Y6R4 1608 aa8.59□□□□□ -1.03
RARB-204ENST00000458646 PRKCSHP14314 528 aaPredicted RBP8.59□□□□□ -1.03
RARB-204ENST00000458646 DMRT2Q9Y5R5 561 aa8.59□□□□□ -1.03
RARB-204ENST00000458646 CCDC146Q8IYE0 955 aa8.59□□□□□ -1.03
RARB-204ENST00000458646 PIAS4Q8N2W9 510 aaPredicted RBP8.59□□□□□ -1.03
RARB-204ENST00000458646 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.59□□□□□ -1.03
RARB-204ENST00000458646 MROH1Q8NDA8 1641 aa8.59□□□□□ -1.03
RARB-204ENST00000458646 INO80Q9ULG1 1556 aaPredicted RBP8.59□□□□□ -1.03
RARB-204ENST00000458646 MROH2AA6NES4 1674 aa8.58□□□□□ -1.04
RARB-204ENST00000458646 MYOM2P54296 1465 aa8.58□□□□□ -1.04
RARB-204ENST00000458646 IQSEC2Q5JU85 1478 aa8.58□□□□□ -1.04
RARB-204ENST00000458646 RGS3P49796 1198 aa8.58□□□□□ -1.04
RARB-204ENST00000458646 BCAR3O75815 825 aa8.58□□□□□ -1.04
RARB-204ENST00000458646 ZC3H13Q5T200 1668 aaKnown RBP8.57□□□□□ -1.04
RARB-204ENST00000458646 UGGT1Q9NYU2 1555 aa8.57□□□□□ -1.04
RARB-204ENST00000458646 APAF1O14727 1248 aa8.57□□□□□ -1.04
RARB-204ENST00000458646 FRAT2O75474 233 aaPredicted RBP8.57□□□□□ -1.04
RARB-204ENST00000458646 IGHDP01880 384 aa8.57□□□□□ -1.04
RARB-204ENST00000458646 NINLQ9Y2I6 1382 aa8.56□□□□□ -1.04
RARB-204ENST00000458646 CDCA8Q53HL2 280 aa8.56□□□□□ -1.04
RARB-204ENST00000458646 ARAP3Q8WWN8 1544 aa8.56□□□□□ -1.04
RARB-204ENST00000458646 E9PSI1 815 aa8.56□□□□□ -1.04
RARB-204ENST00000458646 RTEL1-TNFRSF6BF6WH68 1400 aa8.55□□□□□ -1.04
RARB-204ENST00000458646 NRXN1Q9ULB1 1477 aa8.55□□□□□ -1.04
RARB-204ENST00000458646 ATP7AQ04656 1500 aa8.54□□□□□ -1.04
RARB-204ENST00000458646 USP32Q8NFA0 1604 aa8.54□□□□□ -1.04
RARB-204ENST00000458646 CARD14Q9BXL6 1004 aa8.54□□□□□ -1.04
RARB-204ENST00000458646 DAXXQ9UER7 740 aaPredicted RBP8.54□□□□□ -1.04
RARB-204ENST00000458646 CGNL1Q0VF96 1302 aa8.54□□□□□ -1.04
RARB-204ENST00000458646 KIF1BO60333 1816 aa8.54□□□□□ -1.04
RARB-204ENST00000458646 SEC24BO95487 1268 aa8.54□□□□□ -1.04
RARB-204ENST00000458646 EFCAB6Q5THR3 1501 aa8.54□□□□□ -1.04
RARB-204ENST00000458646 POLR3AO14802 1390 aaPredicted RBP8.54□□□□□ -1.04
RARB-204ENST00000458646 ABCA9Q8IUA7 1624 aa8.54□□□□□ -1.04
RARB-204ENST00000458646 PDE3AQ14432 1141 aa8.53□□□□□ -1.04
RARB-204ENST00000458646 STAC3Q96MF2 364 aa8.53□□□□□ -1.04
RARB-204ENST00000458646 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.53□□□□□ -1.04
RARB-204ENST00000458646 SBNO2Q9Y2G9 1366 aa8.53□□□□□ -1.04
RARB-204ENST00000458646 UHRF1BP1LA0JNW5 1464 aa8.53□□□□□ -1.04
RARB-204ENST00000458646 PPRC1Q5VV67 1664 aaKnown RBP8.53□□□□□ -1.04
RARB-204ENST00000458646 CLUAP1Q96AJ1 413 aa8.53□□□□□ -1.04
RARB-204ENST00000458646 QRICH2Q9H0J4 1663 aa8.53□□□□□ -1.04
RARB-204ENST00000458646 CENPJQ9HC77 1338 aaPredicted RBP8.52□□□□□ -1.04
RARB-204ENST00000458646 MAPK8IP3Q9UPT6 1336 aa8.52□□□□□ -1.04
RARB-204ENST00000458646 SETBP1Q9Y6X0 1596 aa8.52□□□□□ -1.05
RARB-204ENST00000458646 ZMYM3Q14202 1370 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms