RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 KIF3BO15066 747 aa27.46■■□□□ 1.99
CRAT-207ENST00000458362 ADAMTS8Q9UP79 889 aa27.46■■□□□ 1.99
CRAT-207ENST00000458362 KIAA1210Q9ULL0 1709 aa27.44■■□□□ 1.98
CRAT-207ENST00000458362 ADGRL1O94910 1474 aa27.44■■□□□ 1.98
CRAT-207ENST00000458362 UGGT1Q9NYU2 1555 aa27.44■■□□□ 1.98
CRAT-207ENST00000458362 NEURL4Q96JN8 1562 aa27.43■■□□□ 1.98
CRAT-207ENST00000458362 MYT1LQ9UL68 1186 aa27.41■■□□□ 1.98
CRAT-207ENST00000458362 ASXL1Q8IXJ9 1541 aa27.41■■□□□ 1.98
CRAT-207ENST00000458362 PLIN1O60240 522 aa27.41■■□□□ 1.98
CRAT-207ENST00000458362 CDCA8Q53HL2 280 aa27.41■■□□□ 1.98
CRAT-207ENST00000458362 ABCA6Q8N139 1617 aa27.39■■□□□ 1.97
CRAT-207ENST00000458362 MAP3K4Q9Y6R4 1608 aa27.38■■□□□ 1.97
CRAT-207ENST00000458362 KDM5AP29375 1690 aaKnown RBP27.37■■□□□ 1.97
CRAT-207ENST00000458362 NOP58Q9Y2X3 529 aaKnown RBP27.37■■□□□ 1.97
CRAT-207ENST00000458362 EIF3AQ14152 1382 aaKnown RBP27.36■■□□□ 1.97
CRAT-207ENST00000458362 PLEKHH1Q9ULM0 1364 aa27.36■■□□□ 1.97
CRAT-207ENST00000458362 PAK3O75914 559 aaPredicted RBP27.36■■□□□ 1.97
CRAT-207ENST00000458362 CFAP70Q5T0N1 1121 aa27.36■■□□□ 1.97
CRAT-207ENST00000458362 KIF1BO60333 1816 aa27.35■■□□□ 1.97
CRAT-207ENST00000458362 MYOM2P54296 1465 aa27.35■■□□□ 1.97
CRAT-207ENST00000458362 KIDINS220Q9ULH0 1771 aa27.35■■□□□ 1.97
CRAT-207ENST00000458362 ADGRF5Q8IZF2 1346 aa27.34■■□□□ 1.97
CRAT-207ENST00000458362 MROH2AA6NES4 1674 aa27.34■■□□□ 1.97
CRAT-207ENST00000458362 EFCAB6Q5THR3 1501 aa27.34■■□□□ 1.97
CRAT-207ENST00000458362 IFT172Q9UG01 1749 aa27.34■■□□□ 1.97
CRAT-207ENST00000458362 ASXL2Q76L83 1435 aa27.34■■□□□ 1.97
CRAT-207ENST00000458362 WDR43Q15061 677 aaKnown RBP eCLIP27.34■■□□□ 1.97
CRAT-207ENST00000458362 PPRC1Q5VV67 1664 aaKnown RBP27.33■■□□□ 1.97
CRAT-207ENST00000458362 PIK3C2GO75747 1445 aa27.32■■□□□ 1.96
CRAT-207ENST00000458362 CRBNQ96SW2 442 aa27.32■■□□□ 1.96
CRAT-207ENST00000458362 ERVK-7P63135 1459 aa27.31■■□□□ 1.96
CRAT-207ENST00000458362 NPC1L1Q9UHC9 1359 aa27.3■■□□□ 1.96
CRAT-207ENST00000458362 ANP32AP39687 249 aaKnown RBP27.29■■□□□ 1.96
CRAT-207ENST00000458362 TCERG1O14776 1098 aaKnown RBP27.29■■□□□ 1.96
CRAT-207ENST00000458362 ZNF521Q96K83 1311 aa27.28■■□□□ 1.96
CRAT-207ENST00000458362 IPO9Q96P70 1041 aaKnown RBP27.28■■□□□ 1.96
CRAT-207ENST00000458362 C20orf194Q5TEA3 1177 aa27.26■■□□□ 1.95
CRAT-207ENST00000458362 DUSP27Q5VZP5 1158 aa27.26■■□□□ 1.95
CRAT-207ENST00000458362 NRXN1Q9ULB1 1477 aa27.24■■□□□ 1.95
CRAT-207ENST00000458362 LMTK2Q8IWU2 1503 aa27.23■■□□□ 1.95
CRAT-207ENST00000458362 CARD14Q9BXL6 1004 aa27.22■■□□□ 1.95
CRAT-207ENST00000458362 ZNF518AQ6AHZ1 1483 aa27.22■■□□□ 1.95
CRAT-207ENST00000458362 MYO3AQ8NEV4 1616 aa27.21■■□□□ 1.95
CRAT-207ENST00000458362 CCDC146Q8IYE0 955 aa27.21■■□□□ 1.95
CRAT-207ENST00000458362 PDE4AP27815 886 aa27.2■■□□□ 1.95
CRAT-207ENST00000458362 ADGRB3O60242 1522 aa27.2■■□□□ 1.94
CRAT-207ENST00000458362 SLC24A1O60721 1099 aa27.2■■□□□ 1.94
CRAT-207ENST00000458362 GOLGA2Q08379 1002 aa27.2■■□□□ 1.94
CRAT-207ENST00000458362 NOS1P29475 1434 aa27.19■■□□□ 1.94
CRAT-207ENST00000458362 SKAP1Q86WV1 359 aa27.18■■□□□ 1.94
CRAT-207ENST00000458362 MS4A1P11836 297 aa27.18■■□□□ 1.94
CRAT-207ENST00000458362 CFAP65Q6ZU64 1925 aaKnown RBP27.17■■□□□ 1.94
CRAT-207ENST00000458362 SLFN5Q08AF3 891 aa27.16■■□□□ 1.94
CRAT-207ENST00000458362 BACH2Q9BYV9 841 aa27.16■■□□□ 1.94
CRAT-207ENST00000458362 FRMPD1Q5SYB0 1578 aa27.15■■□□□ 1.94
CRAT-207ENST00000458362 ZBTB47Q9UFB7 747 aaPredicted RBP27.14■■□□□ 1.93
CRAT-207ENST00000458362 PPLO60437 1756 aa27.13■■□□□ 1.93
CRAT-207ENST00000458362 CHGAP10645 457 aaKnown RBP27.13■■□□□ 1.93
CRAT-207ENST00000458362 NPM2Q86SE8 214 aaKnown RBP27.13■■□□□ 1.93
CRAT-207ENST00000458362 SETBP1Q9Y6X0 1596 aa27.13■■□□□ 1.93
CRAT-207ENST00000458362 NPATQ14207 1427 aa27.12■■□□□ 1.93
CRAT-207ENST00000458362 SBNO2Q9Y2G9 1366 aa27.12■■□□□ 1.93
CRAT-207ENST00000458362 APAF1O14727 1248 aa27.12■■□□□ 1.93
CRAT-207ENST00000458362 TRMT2AQ8IZ69 625 aaKnown RBP27.12■■□□□ 1.93
CRAT-207ENST00000458362 SPINK5Q9NQ38 1064 aaPredicted RBP27.12■■□□□ 1.93
CRAT-207ENST00000458362 CFAP74Q9C0B2 1584 aa27.11■■□□□ 1.93
CRAT-207ENST00000458362 ZC3H13Q5T200 1668 aaKnown RBP27.11■■□□□ 1.93
CRAT-207ENST00000458362 MLH3Q9UHC1 1453 aa27.1■■□□□ 1.93
CRAT-207ENST00000458362 POGZQ7Z3K3 1410 aa27.1■■□□□ 1.93
CRAT-207ENST00000458362 CENPJQ9HC77 1338 aaPredicted RBP27.1■■□□□ 1.93
CRAT-207ENST00000458362 NBR1Q14596 966 aa27.1■■□□□ 1.93
CRAT-207ENST00000458362 KDM2BQ8NHM5 1336 aa27.09■■□□□ 1.93
CRAT-207ENST00000458362 NPM1P06748 294 aaKnown RBP eCLIP27.09■■□□□ 1.93
CRAT-207ENST00000458362 QRICH2Q9H0J4 1663 aa27.08■■□□□ 1.93
CRAT-207ENST00000458362 TRAK1Q9UPV9 953 aa27.07■■□□□ 1.92
CRAT-207ENST00000458362 CD109Q6YHK3 1445 aa27.07■■□□□ 1.92
CRAT-207ENST00000458362 GGT6Q6P531 493 aa27.06■■□□□ 1.92
CRAT-207ENST00000458362 ADGRB1O14514 1584 aa27.06■■□□□ 1.92
CRAT-207ENST00000458362 HECW2Q9P2P5 1572 aa27.05■■□□□ 1.92
CRAT-207ENST00000458362 OSCARQ8IYS5 282 aa27.05■■□□□ 1.92
CRAT-207ENST00000458362 C14orf93Q9H972 538 aaKnown RBP27.05■■□□□ 1.92
CRAT-207ENST00000458362 DMRT2Q9Y5R5 561 aa27.05■■□□□ 1.92
CRAT-207ENST00000458362 BCL11AQ9H165 835 aa27.04■■□□□ 1.92
CRAT-207ENST00000458362 NKTRP30414 1462 aaKnown RBP27.03■■□□□ 1.92
CRAT-207ENST00000458362 NSD3Q9BZ95 1437 aa27.03■■□□□ 1.92
CRAT-207ENST00000458362 ABCC3O15438 1527 aa27.02■■□□□ 1.92
CRAT-207ENST00000458362 TMEM132EQ6IEE7 984 aa27.02■■□□□ 1.92
CRAT-207ENST00000458362 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.01■■□□□ 1.91
CRAT-207ENST00000458362 POLR3AO14802 1390 aaPredicted RBP27.01■■□□□ 1.91
CRAT-207ENST00000458362 SHPRHQ149N8 1683 aa27.01■■□□□ 1.91
CRAT-207ENST00000458362 SIGLEC1Q9BZZ2 1709 aa27■■□□□ 1.91
CRAT-207ENST00000458362 CENPQQ7L2Z9 268 aaPredicted RBP27■■□□□ 1.91
CRAT-207ENST00000458362 SLC12A5Q9H2X9 1139 aa27■■□□□ 1.91
CRAT-207ENST00000458362 E9PSI1 815 aa26.98■■□□□ 1.91
CRAT-207ENST00000458362 CAMSAP1Q5T5Y3 1602 aa26.98■■□□□ 1.91
CRAT-207ENST00000458362 BCAR3O75815 825 aa26.97■■□□□ 1.91
CRAT-207ENST00000458362 DEKP35659 375 aaKnown RBP26.97■■□□□ 1.91
CRAT-207ENST00000458362 MORC1Q86VD1 984 aa26.95■■□□□ 1.91
CRAT-207ENST00000458362 TNNT2P45379 298 aaPredicted RBP26.95■■□□□ 1.9
CRAT-207ENST00000458362 RPGRIP1LQ68CZ1 1315 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms