RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 ABCC2Q92887 1545 aa20.9■□□□□ 0.94
LSS-205ENST00000457828 IL27Q8NEV9 243 aa20.9■□□□□ 0.94
LSS-205ENST00000457828 LTV1Q96GA3 475 aaPredicted RBP20.9■□□□□ 0.94
LSS-205ENST00000457828 NCOA1Q15788 1441 aa20.89■□□□□ 0.93
LSS-205ENST00000457828 PTPN23Q9H3S7 1636 aa20.89■□□□□ 0.93
LSS-205ENST00000457828 PROSER2Q86WR7 435 aaPredicted RBP20.88■□□□□ 0.93
LSS-205ENST00000457828 MS4A1P11836 297 aa20.88■□□□□ 0.93
LSS-205ENST00000457828 ATF3P18847 181 aa20.88■□□□□ 0.93
LSS-205ENST00000457828 NBPF1Q3BBV0 1214 aa20.88■□□□□ 0.93
LSS-205ENST00000457828 AMPHP49418 695 aa20.87■□□□□ 0.93
LSS-205ENST00000457828 PNNQ9H307 717 aaKnown RBP20.87■□□□□ 0.93
LSS-205ENST00000457828 SKAP1Q86WV1 359 aa20.86■□□□□ 0.93
LSS-205ENST00000457828 ANKRD30BQ9BXX2 1392 aa20.85■□□□□ 0.93
LSS-205ENST00000457828 PSME1Q06323 249 aa20.85■□□□□ 0.93
LSS-205ENST00000457828 GSE1Q14687 1217 aa20.85■□□□□ 0.93
LSS-205ENST00000457828 TEX14Q8IWB6 1497 aa20.84■□□□□ 0.93
LSS-205ENST00000457828 BRD4O60885 1362 aaPredicted RBP20.84■□□□□ 0.93
LSS-205ENST00000457828 FTSJ3Q8IY81 847 aaKnown RBP20.83■□□□□ 0.93
LSS-205ENST00000457828 DHX29Q7Z478 1369 aaKnown RBP20.82■□□□□ 0.92
LSS-205ENST00000457828 IDI1Q13907 227 aa20.82■□□□□ 0.92
LSS-205ENST00000457828 CABP2Q9NPB3 220 aa20.82■□□□□ 0.92
LSS-205ENST00000457828 FAM161AQ3B820 660 aa20.81■□□□□ 0.92
LSS-205ENST00000457828 CENPQQ7L2Z9 268 aaPredicted RBP20.81■□□□□ 0.92
LSS-205ENST00000457828 BACH2Q9BYV9 841 aa20.81■□□□□ 0.92
LSS-205ENST00000457828 PRAM1Q96QH2 718 aa20.81■□□□□ 0.92
LSS-205ENST00000457828 COG3Q96JB2 828 aa20.8■□□□□ 0.92
LSS-205ENST00000457828 RTF1Q92541 710 aaKnown RBP20.79■□□□□ 0.92
LSS-205ENST00000457828 ANO8Q9HCE9 1232 aaPredicted RBP20.79■□□□□ 0.92
LSS-205ENST00000457828 TRAPPC8Q9Y2L5 1435 aa20.79■□□□□ 0.92
LSS-205ENST00000457828 ERBINQ96RT1 1412 aa20.78■□□□□ 0.92
LSS-205ENST00000457828 NFKBIBQ15653 356 aa20.78■□□□□ 0.92
LSS-205ENST00000457828 ANP32BQ92688 251 aaKnown RBP20.77■□□□□ 0.92
LSS-205ENST00000457828 CLUAP1Q96AJ1 413 aa20.77■□□□□ 0.92
LSS-205ENST00000457828 GZF1Q9H116 711 aaPredicted RBP20.76■□□□□ 0.91
LSS-205ENST00000457828 ADAMTS8Q9UP79 889 aa20.76■□□□□ 0.91
LSS-205ENST00000457828 CGNL1Q0VF96 1302 aa20.76■□□□□ 0.91
LSS-205ENST00000457828 APAF1O14727 1248 aa20.75■□□□□ 0.91
LSS-205ENST00000457828 NUTM2GQ5VZR2 741 aa20.74■□□□□ 0.91
LSS-205ENST00000457828 BRPF3Q9ULD4 1205 aa20.74■□□□□ 0.91
LSS-205ENST00000457828 NAP1L5Q96NT1 182 aaPredicted RBP20.73■□□□□ 0.91
LSS-205ENST00000457828 ESCO1Q5FWF5 840 aa20.72■□□□□ 0.91
LSS-205ENST00000457828 SYCP2Q9BX26 1530 aa20.72■□□□□ 0.91
LSS-205ENST00000457828 PMFBP1Q8TBY8 1022 aa20.72■□□□□ 0.91
LSS-205ENST00000457828 RPRD2Q5VT52 1461 aaKnown RBP20.72■□□□□ 0.91
LSS-205ENST00000457828 RPGRIP1LQ68CZ1 1315 aa20.72■□□□□ 0.91
LSS-205ENST00000457828 RRP7AQ9Y3A4 280 aaKnown RBP20.71■□□□□ 0.91
LSS-205ENST00000457828 ZNF518AQ6AHZ1 1483 aa20.71■□□□□ 0.91
LSS-205ENST00000457828 BCL2L13Q9BXK5 485 aa20.71■□□□□ 0.91
LSS-205ENST00000457828 PPP6R1Q9UPN7 881 aa20.71■□□□□ 0.91
LSS-205ENST00000457828 COG6Q9Y2V7 657 aa20.71■□□□□ 0.91
LSS-205ENST00000457828 TRIM44Q96DX7 344 aaPredicted RBP20.7■□□□□ 0.9
LSS-205ENST00000457828 MYH16Q9H6N6 1097 aa20.7■□□□□ 0.9
LSS-205ENST00000457828 EVA1CP58658 441 aa20.68■□□□□ 0.9
LSS-205ENST00000457828 GLIPR1L2Q4G1C9 344 aa20.68■□□□□ 0.9
LSS-205ENST00000457828 GGNBP2Q9H3C7 697 aa20.68■□□□□ 0.9
LSS-205ENST00000457828 A2MP01023 1474 aa20.67■□□□□ 0.9
LSS-205ENST00000457828 NPHP1O15259 732 aa20.67■□□□□ 0.9
LSS-205ENST00000457828 NLRP6P59044 892 aa20.66■□□□□ 0.9
LSS-205ENST00000457828 RBM33Q96EV2 1170 aaKnown RBP20.66■□□□□ 0.9
LSS-205ENST00000457828 CFAP43Q8NDM7 1665 aa20.65■□□□□ 0.9
LSS-205ENST00000457828 C20orf194Q5TEA3 1177 aa20.65■□□□□ 0.9
LSS-205ENST00000457828 KDM5BQ9UGL1 1544 aa20.64■□□□□ 0.9
LSS-205ENST00000457828 FRAT2O75474 233 aaPredicted RBP20.64■□□□□ 0.89
LSS-205ENST00000457828 L1TD1Q5T7N2 865 aaKnown RBP20.64■□□□□ 0.89
LSS-205ENST00000457828 SLC12A5Q9H2X9 1139 aa20.63■□□□□ 0.89
LSS-205ENST00000457828 ABCC10Q5T3U5 1492 aa20.63■□□□□ 0.89
LSS-205ENST00000457828 ZNF330Q9Y3S2 320 aaPredicted RBP20.63■□□□□ 0.89
LSS-205ENST00000457828 MFAP1P55081 439 aaKnown RBP20.62■□□□□ 0.89
LSS-205ENST00000457828 CDK19Q9BWU1 502 aa20.62■□□□□ 0.89
LSS-205ENST00000457828 WAPLQ7Z5K2 1190 aa20.62■□□□□ 0.89
LSS-205ENST00000457828 CHD1O14646 1710 aa20.61■□□□□ 0.89
LSS-205ENST00000457828 ADGRF5Q8IZF2 1346 aa20.61■□□□□ 0.89
LSS-205ENST00000457828 NCLP19338 710 aaKnown RBP20.6■□□□□ 0.89
LSS-205ENST00000457828 HSCBQ8IWL3 235 aa20.6■□□□□ 0.89
LSS-205ENST00000457828 DNAJC5Q9H3Z4 198 aa20.6■□□□□ 0.89
LSS-205ENST00000457828 ABTB2Q8N961 1025 aa20.6■□□□□ 0.89
LSS-205ENST00000457828 RWDD1Q9H446 243 aaPredicted RBP20.6■□□□□ 0.89
LSS-205ENST00000457828 CABP1Q9NZU7 370 aa20.6■□□□□ 0.89
LSS-205ENST00000457828 HSP90AB1P08238 724 aaKnown RBP20.59■□□□□ 0.89
LSS-205ENST00000457828 E9PSI1 815 aa20.59■□□□□ 0.89
LSS-205ENST00000457828 TNRQ92752 1358 aa20.58■□□□□ 0.89
LSS-205ENST00000457828 PANK1Q8TE04 598 aa20.58■□□□□ 0.89
LSS-205ENST00000457828 GPRASP1Q5JY77 1395 aa20.58■□□□□ 0.88
LSS-205ENST00000457828 PPP2R1AP30153 589 aa20.57■□□□□ 0.88
LSS-205ENST00000457828 MEX3CQ5U5Q3 659 aaKnown RBP20.57■□□□□ 0.88
LSS-205ENST00000457828 PIP4K2BP78356 416 aa20.57■□□□□ 0.88
LSS-205ENST00000457828 SAMD9Q5K651 1589 aa20.57■□□□□ 0.88
LSS-205ENST00000457828 BCAR3O75815 825 aa20.56■□□□□ 0.88
LSS-205ENST00000457828 AMOTL2Q9Y2J4 779 aa20.56■□□□□ 0.88
LSS-205ENST00000457828 ITPRIPQ8IWB1 547 aa20.56■□□□□ 0.88
LSS-205ENST00000457828 GOLGA6L22H0YM25 854 aa20.55■□□□□ 0.88
LSS-205ENST00000457828 HSPA2P54652 639 aa20.55■□□□□ 0.88
LSS-205ENST00000457828 XPCQ01831 940 aaPredicted RBP20.54■□□□□ 0.88
LSS-205ENST00000457828 CALD1Q05682 793 aaKnown RBP20.54■□□□□ 0.88
LSS-205ENST00000457828 ITSN2Q9NZM3 1697 aa20.54■□□□□ 0.88
LSS-205ENST00000457828 GOLGA6L3A6NEY3 463 aa20.53■□□□□ 0.88
LSS-205ENST00000457828 SMC4Q9NTJ3 1288 aa20.53■□□□□ 0.88
LSS-205ENST00000457828 ERCC6L2Q5T890 1561 aa20.52■□□□□ 0.88
LSS-205ENST00000457828 RTEL1-TNFRSF6BF6WH68 1400 aa20.52■□□□□ 0.88
LSS-205ENST00000457828 DIAPH1O60610 1272 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms