RNA–Protein interactions for RNA: ENST00000457183.6

THBS3-203, Transcript of thrombospondin 3, humanhuman

TSL 2 BASIC

Gene THBS3, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-203ENST00000457183 WASHC2CQ9Y4E1 1318 aa13.3□□□□□ -0.28
THBS3-203ENST00000457183 L3MBTL2Q969R5 705 aa13.29□□□□□ -0.28
THBS3-203ENST00000457183 NEURL4Q96JN8 1562 aa13.29□□□□□ -0.28
THBS3-203ENST00000457183 CCDC7Q96M83 1385 aa13.29□□□□□ -0.28
THBS3-203ENST00000457183 LMTK3Q96Q04 1460 aa13.28□□□□□ -0.28
THBS3-203ENST00000457183 MROH2AA6NES4 1674 aa13.27□□□□□ -0.29
THBS3-203ENST00000457183 ZMYM3Q14202 1370 aa13.27□□□□□ -0.29
THBS3-203ENST00000457183 NPATQ14207 1427 aa13.27□□□□□ -0.29
THBS3-203ENST00000457183 HSPA2P54652 639 aa13.26□□□□□ -0.29
THBS3-203ENST00000457183 PREX1Q8TCU6 1659 aa13.26□□□□□ -0.29
THBS3-203ENST00000457183 CLTCL1P53675 1640 aa13.26□□□□□ -0.29
THBS3-203ENST00000457183 UHRF1BP1Q6BDS2 1440 aa13.25□□□□□ -0.29
THBS3-203ENST00000457183 KIF1BO60333 1816 aa13.24□□□□□ -0.29
THBS3-203ENST00000457183 NOS1P29475 1434 aa13.24□□□□□ -0.29
THBS3-203ENST00000457183 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
THBS3-203ENST00000457183 NBR1Q14596 966 aa13.23□□□□□ -0.29
THBS3-203ENST00000457183 NBPF8Q3BBV2 869 aa13.23□□□□□ -0.29
THBS3-203ENST00000457183 KIF7Q2M1P5 1343 aa13.22□□□□□ -0.29
THBS3-203ENST00000457183 NOP58Q9Y2X3 529 aaKnown RBP13.22□□□□□ -0.29
THBS3-203ENST00000457183 SPATA31E1Q6ZUB1 1445 aa13.22□□□□□ -0.29
THBS3-203ENST00000457183 PIK3C2BO00750 1634 aa13.22□□□□□ -0.29
THBS3-203ENST00000457183 STAC3Q96MF2 364 aa13.21□□□□□ -0.29
THBS3-203ENST00000457183 SETD1BQ9UPS6 1966 aaKnown RBP13.2□□□□□ -0.3
THBS3-203ENST00000457183 CFAP65Q6ZU64 1925 aaKnown RBP13.2□□□□□ -0.3
THBS3-203ENST00000457183 SYNMO15061 1565 aa13.2□□□□□ -0.3
THBS3-203ENST00000457183 SPATA31D1Q6ZQQ2 1576 aa13.18□□□□□ -0.3
THBS3-203ENST00000457183 SMG6Q86US8 1419 aaKnown RBP13.18□□□□□ -0.3
THBS3-203ENST00000457183 ERVK-7P63135 1459 aa13.17□□□□□ -0.3
THBS3-203ENST00000457183 ADGRB3O60242 1522 aa13.17□□□□□ -0.3
THBS3-203ENST00000457183 FBXO31Q5XUX0 539 aaPredicted RBP13.17□□□□□ -0.3
THBS3-203ENST00000457183 SLC52A1Q9NWF4 448 aa13.17□□□□□ -0.3
THBS3-203ENST00000457183 DAXXQ9UER7 740 aaPredicted RBP13.17□□□□□ -0.3
THBS3-203ENST00000457183 UGGT1Q9NYU2 1555 aa13.17□□□□□ -0.3
THBS3-203ENST00000457183 MYO3AQ8NEV4 1616 aa13.16□□□□□ -0.3
THBS3-203ENST00000457183 IFT172Q9UG01 1749 aa13.16□□□□□ -0.3
THBS3-203ENST00000457183 DCAF11Q8TEB1 546 aa13.15□□□□□ -0.3
THBS3-203ENST00000457183 CCDC136Q96JN2 1154 aa13.15□□□□□ -0.3
THBS3-203ENST00000457183 NUDCQ9Y266 331 aa13.15□□□□□ -0.3
THBS3-203ENST00000457183 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
THBS3-203ENST00000457183 TNRQ92752 1358 aa13.14□□□□□ -0.31
THBS3-203ENST00000457183 RALGAPBQ86X10 1494 aa13.14□□□□□ -0.31
THBS3-203ENST00000457183 CNGB1Q14028 1251 aaPredicted RBP13.14□□□□□ -0.31
THBS3-203ENST00000457183 PRAG1Q86YV5 1406 aa13.14□□□□□ -0.31
THBS3-203ENST00000457183 MYOM2P54296 1465 aa13.13□□□□□ -0.31
THBS3-203ENST00000457183 CEP170BQ9Y4F5 1589 aaPredicted RBP13.13□□□□□ -0.31
THBS3-203ENST00000457183 SENP3-EIF4A1A0A087X0R7 540 aa13.13□□□□□ -0.31
THBS3-203ENST00000457183 RGL3Q3MIN7 710 aa13.13□□□□□ -0.31
THBS3-203ENST00000457183 TRPM1Q7Z4N2 1603 aa13.13□□□□□ -0.31
THBS3-203ENST00000457183 RPGRIP1LQ68CZ1 1315 aa13.12□□□□□ -0.31
THBS3-203ENST00000457183 PPLO60437 1756 aa13.12□□□□□ -0.31
THBS3-203ENST00000457183 ANP32AP39687 249 aaKnown RBP13.12□□□□□ -0.31
THBS3-203ENST00000457183 IPO9Q96P70 1041 aaKnown RBP13.12□□□□□ -0.31
THBS3-203ENST00000457183 POLR1AO95602 1720 aaPredicted RBP13.12□□□□□ -0.31
THBS3-203ENST00000457183 ZNF142P52746 1687 aaPredicted RBP13.12□□□□□ -0.31
THBS3-203ENST00000457183 KIAA1210Q9ULL0 1709 aa13.11□□□□□ -0.31
THBS3-203ENST00000457183 KDM5AP29375 1690 aaKnown RBP13.11□□□□□ -0.31
THBS3-203ENST00000457183 TMEM131LA2VDJ0 1609 aa13.11□□□□□ -0.31
THBS3-203ENST00000457183 LAMC1P11047 1609 aa13.11□□□□□ -0.31
THBS3-203ENST00000457183 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
THBS3-203ENST00000457183 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
THBS3-203ENST00000457183 A2ML1A8K2U0 1454 aa13.1□□□□□ -0.31
THBS3-203ENST00000457183 STRCQ7RTU9 1775 aa13.09□□□□□ -0.31
THBS3-203ENST00000457183 IDI1Q13907 227 aa13.09□□□□□ -0.31
THBS3-203ENST00000457183 NRXN1Q9ULB1 1477 aa13.09□□□□□ -0.31
THBS3-203ENST00000457183 POLR3GLQ9BT43 218 aa13.09□□□□□ -0.31
THBS3-203ENST00000457183 MYO5BQ9ULV0 1848 aa13.08□□□□□ -0.32
THBS3-203ENST00000457183 DMRT2Q9Y5R5 561 aa13.08□□□□□ -0.32
THBS3-203ENST00000457183 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
THBS3-203ENST00000457183 GPRASP1Q5JY77 1395 aa13.07□□□□□ -0.32
THBS3-203ENST00000457183 EIF5BO60841 1220 aaKnown RBP13.07□□□□□ -0.32
THBS3-203ENST00000457183 PNISRQ8TF01 805 aaKnown RBP13.07□□□□□ -0.32
THBS3-203ENST00000457183 NLRP1Q9C000 1473 aa13.07□□□□□ -0.32
THBS3-203ENST00000457183 ZFYVE9O95405 1425 aa13.07□□□□□ -0.32
THBS3-203ENST00000457183 NEXMIFQ5QGS0 1516 aa13.07□□□□□ -0.32
THBS3-203ENST00000457183 USP47Q96K76 1375 aa13.06□□□□□ -0.32
THBS3-203ENST00000457183 ZNF326Q5BKZ1 582 aaKnown RBP13.06□□□□□ -0.32
THBS3-203ENST00000457183 NCKAP5LQ9HCH0 1330 aa13.06□□□□□ -0.32
THBS3-203ENST00000457183 CHGAP10645 457 aaKnown RBP13.05□□□□□ -0.32
THBS3-203ENST00000457183 ROCK2O75116 1388 aaKnown RBP13.04□□□□□ -0.32
THBS3-203ENST00000457183 RTL5Q5HYW3 569 aaPredicted RBP13.04□□□□□ -0.32
THBS3-203ENST00000457183 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
THBS3-203ENST00000457183 THEMISQ8N1K5 641 aaPredicted RBP13.04□□□□□ -0.32
THBS3-203ENST00000457183 VGFO15240 615 aaPredicted RBP13.03□□□□□ -0.32
THBS3-203ENST00000457183 UBR1Q8IWV7 1749 aa13.02□□□□□ -0.32
THBS3-203ENST00000457183 PIK3C2GO75747 1445 aa13.02□□□□□ -0.32
THBS3-203ENST00000457183 SETBP1Q9Y6X0 1596 aa13.02□□□□□ -0.32
THBS3-203ENST00000457183 CARD11Q9BXL7 1154 aa13.02□□□□□ -0.32
THBS3-203ENST00000457183 STAG3Q9UJ98 1225 aa13.02□□□□□ -0.33
THBS3-203ENST00000457183 SALL2Q9Y467 1007 aaPredicted RBP13.01□□□□□ -0.33
THBS3-203ENST00000457183 IQGAP1P46940 1657 aa13.01□□□□□ -0.33
THBS3-203ENST00000457183 ADGRF5Q8IZF2 1346 aa13□□□□□ -0.33
THBS3-203ENST00000457183 ANKLE2Q86XL3 938 aa13□□□□□ -0.33
THBS3-203ENST00000457183 IL27Q8NEV9 243 aa12.99□□□□□ -0.33
THBS3-203ENST00000457183 LRPPRCP42704 1394 aaKnown RBP12.98□□□□□ -0.33
THBS3-203ENST00000457183 HDGFP51858 240 aaKnown RBP12.98□□□□□ -0.33
THBS3-203ENST00000457183 RRP1P56182 461 aaKnown RBP12.98□□□□□ -0.33
THBS3-203ENST00000457183 NBPF1Q3BBV0 1214 aa12.98□□□□□ -0.33
THBS3-203ENST00000457183 RTN4Q9NQC3 1192 aaKnown RBP12.98□□□□□ -0.33
THBS3-203ENST00000457183 NPM2Q86SE8 214 aaKnown RBP12.97□□□□□ -0.33
THBS3-203ENST00000457183 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms