RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 SETD5Q9C0A6 1442 aa14.01□□□□□ -0.17
PTCHD1-202ENST00000456522 MAGI2Q86UL8 1455 aa14□□□□□ -0.17
PTCHD1-202ENST00000456522 DIP2CQ9Y2E4 1556 aa14□□□□□ -0.17
PTCHD1-202ENST00000456522 DUOX2Q9NRD8 1548 aa13.99□□□□□ -0.17
PTCHD1-202ENST00000456522 ANKRD50Q9ULJ7 1429 aa13.98□□□□□ -0.17
PTCHD1-202ENST00000456522 ARHGEF40Q8TER5 1519 aa13.97□□□□□ -0.17
PTCHD1-202ENST00000456522 PCDHB8Q9UN66 801 aa13.97□□□□□ -0.17
PTCHD1-202ENST00000456522 PCDHB13Q9Y5F0 798 aa13.97□□□□□ -0.17
PTCHD1-202ENST00000456522 ATP10AO60312 1499 aa13.97□□□□□ -0.17
PTCHD1-202ENST00000456522 A2MP01023 1474 aa13.97□□□□□ -0.17
PTCHD1-202ENST00000456522 RAB3GAP2Q9H2M9 1393 aa13.96□□□□□ -0.17
PTCHD1-202ENST00000456522 PAK3O75914 559 aaPredicted RBP13.96□□□□□ -0.17
PTCHD1-202ENST00000456522 DHX29Q7Z478 1369 aaKnown RBP13.96□□□□□ -0.18
PTCHD1-202ENST00000456522 KIF3BO15066 747 aa13.94□□□□□ -0.18
PTCHD1-202ENST00000456522 ERBINQ96RT1 1412 aa13.93□□□□□ -0.18
PTCHD1-202ENST00000456522 PSEN1P49768 467 aa13.93□□□□□ -0.18
PTCHD1-202ENST00000456522 TRIM52Q96A61 297 aa13.93□□□□□ -0.18
PTCHD1-202ENST00000456522 KIF12Q96FN5 646 aa13.93□□□□□ -0.18
PTCHD1-202ENST00000456522 ARID4BQ4LE39 1312 aaPredicted RBP13.91□□□□□ -0.18
PTCHD1-202ENST00000456522 EIF2AK4Q9P2K8 1649 aaKnown RBP13.9□□□□□ -0.18
PTCHD1-202ENST00000456522 SIGLEC1Q9BZZ2 1709 aa13.9□□□□□ -0.18
PTCHD1-202ENST00000456522 IFNL1Q8IU54 200 aa13.9□□□□□ -0.18
PTCHD1-202ENST00000456522 REREQ9P2R6 1566 aa13.9□□□□□ -0.18
PTCHD1-202ENST00000456522 HRCP23327 699 aa13.89□□□□□ -0.19
PTCHD1-202ENST00000456522 GGT6Q6P531 493 aa13.89□□□□□ -0.19
PTCHD1-202ENST00000456522 MLECQ14165 292 aa13.88□□□□□ -0.19
PTCHD1-202ENST00000456522 NUP155O75694 1391 aa13.87□□□□□ -0.19
PTCHD1-202ENST00000456522 MAP3K13O43283 966 aa13.87□□□□□ -0.19
PTCHD1-202ENST00000456522 UNC13BO14795 1591 aa13.87□□□□□ -0.19
PTCHD1-202ENST00000456522 AGLP35573 1532 aa13.86□□□□□ -0.19
PTCHD1-202ENST00000456522 MFRPQ9BY79 579 aa13.86□□□□□ -0.19
PTCHD1-202ENST00000456522 BCORL1Q5H9F3 1711 aa13.86□□□□□ -0.19
PTCHD1-202ENST00000456522 RNF17Q9BXT8 1623 aaKnown RBP13.86□□□□□ -0.19
PTCHD1-202ENST00000456522 DEPDC5O75140 1603 aa13.85□□□□□ -0.19
PTCHD1-202ENST00000456522 KANK1Q14678 1352 aa13.84□□□□□ -0.19
PTCHD1-202ENST00000456522 MROH1Q8NDA8 1641 aa13.84□□□□□ -0.19
PTCHD1-202ENST00000456522 ACIN1Q9UKV3 1341 aaKnown RBP13.84□□□□□ -0.19
PTCHD1-202ENST00000456522 CEP152O94986 1710 aa13.82□□□□□ -0.2
PTCHD1-202ENST00000456522 PRDM15P57071 1507 aaPredicted RBP13.82□□□□□ -0.2
PTCHD1-202ENST00000456522 MPHOSPH9Q99550 1183 aa13.82□□□□□ -0.2
PTCHD1-202ENST00000456522 PZPP20742 1482 aa13.81□□□□□ -0.2
PTCHD1-202ENST00000456522 PRKCSHP14314 528 aaPredicted RBP13.81□□□□□ -0.2
PTCHD1-202ENST00000456522 NBR1Q14596 966 aa13.81□□□□□ -0.2
PTCHD1-202ENST00000456522 IQGAP3Q86VI3 1631 aa13.81□□□□□ -0.2
PTCHD1-202ENST00000456522 WASHC2CQ9Y4E1 1318 aa13.81□□□□□ -0.2
PTCHD1-202ENST00000456522 KDM5DQ9BY66 1539 aa13.8□□□□□ -0.2
PTCHD1-202ENST00000456522 FAM135AQ9P2D6 1515 aa13.8□□□□□ -0.2
PTCHD1-202ENST00000456522 CD44P16070 742 aaKnown RBP13.8□□□□□ -0.2
PTCHD1-202ENST00000456522 CCER1Q8TC90 406 aaPredicted RBP13.79□□□□□ -0.2
PTCHD1-202ENST00000456522 ESF1Q9H501 851 aaKnown RBP13.79□□□□□ -0.2
PTCHD1-202ENST00000456522 DHX57Q6P158 1386 aaKnown RBP13.79□□□□□ -0.2
PTCHD1-202ENST00000456522 VWDEQ8N2E2 1590 aa13.79□□□□□ -0.2
PTCHD1-202ENST00000456522 FBXO22Q8NEZ5 403 aa13.78□□□□□ -0.2
PTCHD1-202ENST00000456522 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
PTCHD1-202ENST00000456522 ABCC3O15438 1527 aa13.78□□□□□ -0.2
PTCHD1-202ENST00000456522 CLTCQ00610 1675 aaKnown RBP13.78□□□□□ -0.2
PTCHD1-202ENST00000456522 SOX12O15370 315 aa13.77□□□□□ -0.21
PTCHD1-202ENST00000456522 CFAP65Q6ZU64 1925 aaKnown RBP13.77□□□□□ -0.21
PTCHD1-202ENST00000456522 TET3O43151 1660 aa13.76□□□□□ -0.21
PTCHD1-202ENST00000456522 ZC3H13Q5T200 1668 aaKnown RBP13.75□□□□□ -0.21
PTCHD1-202ENST00000456522 CADPS2Q86UW7 1296 aa13.75□□□□□ -0.21
PTCHD1-202ENST00000456522 FER1L4A9Z1Z3 1794 aa13.75□□□□□ -0.21
PTCHD1-202ENST00000456522 CAMSAP1Q5T5Y3 1602 aa13.75□□□□□ -0.21
PTCHD1-202ENST00000456522 TPRNQ4KMQ1 711 aa13.74□□□□□ -0.21
PTCHD1-202ENST00000456522 EFCAB3Q8N7B9 438 aa13.74□□□□□ -0.21
PTCHD1-202ENST00000456522 E9PCH4 1651 aa13.74□□□□□ -0.21
PTCHD1-202ENST00000456522 LMTK2Q8IWU2 1503 aa13.74□□□□□ -0.21
PTCHD1-202ENST00000456522 NLRP6P59044 892 aa13.73□□□□□ -0.21
PTCHD1-202ENST00000456522 EFCAB6Q5THR3 1501 aa13.73□□□□□ -0.21
PTCHD1-202ENST00000456522 MADDQ8WXG6 1647 aa13.72□□□□□ -0.21
PTCHD1-202ENST00000456522 PHF12Q96QT6 1004 aa13.72□□□□□ -0.21
PTCHD1-202ENST00000456522 CABP2Q9NPB3 220 aa13.72□□□□□ -0.21
PTCHD1-202ENST00000456522 ADAMTSL3P82987 1691 aa13.72□□□□□ -0.21
PTCHD1-202ENST00000456522 C19orf67A6NJJ6 358 aa13.71□□□□□ -0.21
PTCHD1-202ENST00000456522 RIMS1Q86UR5 1692 aaKnown RBP13.71□□□□□ -0.21
PTCHD1-202ENST00000456522 CNTLNQ9NXG0 1405 aa13.71□□□□□ -0.22
PTCHD1-202ENST00000456522 ZMYM3Q14202 1370 aa13.7□□□□□ -0.22
PTCHD1-202ENST00000456522 NPATQ14207 1427 aa13.69□□□□□ -0.22
PTCHD1-202ENST00000456522 MROH2AA6NES4 1674 aa13.69□□□□□ -0.22
PTCHD1-202ENST00000456522 CEBPAP49715 358 aaPredicted RBP13.68□□□□□ -0.22
PTCHD1-202ENST00000456522 SPHKAPQ2M3C7 1700 aa13.67□□□□□ -0.22
PTCHD1-202ENST00000456522 ARHGAP31Q2M1Z3 1444 aa13.67□□□□□ -0.22
PTCHD1-202ENST00000456522 FBXO31Q5XUX0 539 aaPredicted RBP13.67□□□□□ -0.22
PTCHD1-202ENST00000456522 SIN3AQ96ST3 1273 aa13.67□□□□□ -0.22
PTCHD1-202ENST00000456522 PHF8Q9UPP1 1060 aa13.67□□□□□ -0.22
PTCHD1-202ENST00000456522 ANKRD30BQ9BXX2 1392 aa13.67□□□□□ -0.22
PTCHD1-202ENST00000456522 RPRD2Q5VT52 1461 aaKnown RBP13.67□□□□□ -0.22
PTCHD1-202ENST00000456522 C3P01024 1663 aa13.66□□□□□ -0.22
PTCHD1-202ENST00000456522 PREX1Q8TCU6 1659 aa13.66□□□□□ -0.22
PTCHD1-202ENST00000456522 PPP1R37O75864 691 aa13.66□□□□□ -0.22
PTCHD1-202ENST00000456522 NEUROD1Q13562 356 aa13.66□□□□□ -0.22
PTCHD1-202ENST00000456522 PLA2R1Q13018 1463 aa13.65□□□□□ -0.22
PTCHD1-202ENST00000456522 PTPRTO14522 1441 aa13.64□□□□□ -0.23
PTCHD1-202ENST00000456522 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
PTCHD1-202ENST00000456522 ERVK-7P63135 1459 aa13.63□□□□□ -0.23
PTCHD1-202ENST00000456522 TRPM2O94759 1503 aa13.63□□□□□ -0.23
PTCHD1-202ENST00000456522 KDM4FA0A1W2PPD8 638 aa13.62□□□□□ -0.23
PTCHD1-202ENST00000456522 CCDC144AA2RUR9 1427 aa13.62□□□□□ -0.23
PTCHD1-202ENST00000456522 NOS1P29475 1434 aa13.62□□□□□ -0.23
PTCHD1-202ENST00000456522 SYNMO15061 1565 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms