RNA–Protein interactions for RNA: ENST00000456459.1

PCDH9-AS4-201, PCDH9 antisense RNA 4, humanhuman

TSL 3 BASIC

Gene PCDH9-AS4, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS4-201ENST00000456459 MTRQ99707 1265 aa12.08□□□□□ -0.48
PCDH9-AS4-201ENST00000456459 OATP04181 439 aa12.07□□□□□ -0.48
PCDH9-AS4-201ENST00000456459 METTL3Q86U44 580 aaKnown RBP12.06□□□□□ -0.48
PCDH9-AS4-201ENST00000456459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.05□□□□□ -0.48
PCDH9-AS4-201ENST00000456459 IL21Q9HBE4 155 aa12.04□□□□□ -0.48
PCDH9-AS4-201ENST00000456459 RGS20O76081 388 aa12.03□□□□□ -0.48
PCDH9-AS4-201ENST00000456459 ZNF516Q92618 1163 aa12.03□□□□□ -0.48
PCDH9-AS4-201ENST00000456459 TULP1O00294 542 aaPredicted RBP12□□□□□ -0.49
PCDH9-AS4-201ENST00000456459 SLC10A3P09131 477 aa12□□□□□ -0.49
PCDH9-AS4-201ENST00000456459 COPS2P61201 443 aa12□□□□□ -0.49
PCDH9-AS4-201ENST00000456459 PRR14Q9BWN1 585 aa11.99□□□□□ -0.49
PCDH9-AS4-201ENST00000456459 NLRP7Q8WX94 980 aa11.98□□□□□ -0.49
PCDH9-AS4-201ENST00000456459 PHOX2BQ99453 314 aa11.97□□□□□ -0.49
PCDH9-AS4-201ENST00000456459 PCDHB3Q9Y5E6 796 aa11.97□□□□□ -0.49
PCDH9-AS4-201ENST00000456459 CFHP08603 1231 aa11.96□□□□□ -0.49
PCDH9-AS4-201ENST00000456459 NKX2-3Q8TAU0 364 aa11.96□□□□□ -0.49
PCDH9-AS4-201ENST00000456459 ACTN4O43707 911 aaKnown RBP11.94□□□□□ -0.5
PCDH9-AS4-201ENST00000456459 KMT5BQ4FZB7 885 aa11.94□□□□□ -0.5
PCDH9-AS4-201ENST00000456459 BLOC1S3Q6QNY0 202 aa11.94□□□□□ -0.5
PCDH9-AS4-201ENST00000456459 ZPR1O75312 459 aa11.93□□□□□ -0.5
PCDH9-AS4-201ENST00000456459 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCDH9-AS4-201ENST00000456459 DAXXQ9UER7 740 aaPredicted RBP11.93□□□□□ -0.5
PCDH9-AS4-201ENST00000456459 PPP1R18Q6NYC8 613 aa11.92□□□□□ -0.5
PCDH9-AS4-201ENST00000456459 MAP2K5Q13163 448 aa11.91□□□□□ -0.5
PCDH9-AS4-201ENST00000456459 RSPH4AQ5TD94 716 aa11.88□□□□□ -0.51
PCDH9-AS4-201ENST00000456459 DDX11L8A8MPP1 907 aa11.87□□□□□ -0.51
PCDH9-AS4-201ENST00000456459 IRF6O14896 467 aa11.87□□□□□ -0.51
PCDH9-AS4-201ENST00000456459 RDH13Q8NBN7 331 aa11.87□□□□□ -0.51
PCDH9-AS4-201ENST00000456459 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.87□□□□□ -0.51
PCDH9-AS4-201ENST00000456459 TLL1O43897 1013 aa11.86□□□□□ -0.51
PCDH9-AS4-201ENST00000456459 LMOD2Q6P5Q4 547 aa11.86□□□□□ -0.51
PCDH9-AS4-201ENST00000456459 MINK1Q8N4C8 1332 aaPredicted RBP11.85□□□□□ -0.51
PCDH9-AS4-201ENST00000456459 IRX2Q9BZI1 471 aaPredicted RBP11.84□□□□□ -0.51
PCDH9-AS4-201ENST00000456459 PUS10Q3MIT2 529 aaKnown RBP11.83□□□□□ -0.52
PCDH9-AS4-201ENST00000456459 SULF1Q8IWU6 871 aa11.82□□□□□ -0.52
PCDH9-AS4-201ENST00000456459 CCDC102AQ96A19 550 aa11.82□□□□□ -0.52
PCDH9-AS4-201ENST00000456459 NR1I2O75469 434 aa11.81□□□□□ -0.52
PCDH9-AS4-201ENST00000456459 PRKD2Q9BZL6 878 aa11.81□□□□□ -0.52
PCDH9-AS4-201ENST00000456459 GGCXP38435 758 aa11.8□□□□□ -0.52
PCDH9-AS4-201ENST00000456459 GCGRP47871 477 aa11.8□□□□□ -0.52
PCDH9-AS4-201ENST00000456459 FUT2Q10981 343 aa11.8□□□□□ -0.52
PCDH9-AS4-201ENST00000456459 SCUBE3Q8IX30 993 aa11.8□□□□□ -0.52
PCDH9-AS4-201ENST00000456459 TMUB1Q9BVT8 246 aa11.79□□□□□ -0.52
PCDH9-AS4-201ENST00000456459 MDM2Q00987 491 aaPredicted RBP11.78□□□□□ -0.52
PCDH9-AS4-201ENST00000456459 MORN1Q5T089 497 aa11.77□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 RNF223E7ERA6 249 aa11.76□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 ADH1BP00325 375 aa11.76□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 S1PR4O95977 384 aa11.75□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 CD46P15529 392 aa11.75□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 ATP6V1AP38606 617 aa11.75□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 ZC3H15Q8WU90 426 aaKnown RBP11.74□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 PPEF1O14829 653 aaPredicted RBP11.73□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 ZMYND10O75800 440 aa11.73□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 BARGINQ6ZT62 677 aa11.73□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 SPSB2Q99619 263 aa11.72□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 SLC27A5Q9Y2P5 690 aa11.72□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 KRI1Q8N9T8 703 aaKnown RBP11.71□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 SLC6A16Q9GZN6 736 aa11.71□□□□□ -0.53
PCDH9-AS4-201ENST00000456459 EMID1Q96A84 441 aaPredicted RBP11.7□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 THAP11Q96EK4 314 aa11.7□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 GPCPD1Q9NPB8 672 aa11.7□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 CLCN1P35523 988 aa11.69□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 ANKLE1Q8NAG6 615 aa11.69□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 REPIN1Q9BWE0 567 aaKnown RBP11.68□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 FAM217BQ9NTX9 383 aaPredicted RBP11.67□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 KDM4AO75164 1064 aa11.66□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 FMNL1O95466 1100 aaPredicted RBP11.66□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 SLC19A1P41440 591 aa11.66□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 GRIPAP1Q4V328 841 aa11.66□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 GFRA3O60609 400 aa11.65□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 BRICD5Q6PL45 260 aa11.65□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 FAM160A2Q8N612 972 aaPredicted RBP11.65□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 SALL2Q9Y467 1007 aaPredicted RBP11.65□□□□□ -0.54
PCDH9-AS4-201ENST00000456459 RNF19BQ6ZMZ0 732 aa11.64□□□□□ -0.55
PCDH9-AS4-201ENST00000456459 PLA2G2CQ5R387 149 aa11.63□□□□□ -0.55
PCDH9-AS4-201ENST00000456459 LIAT1Q6ZQX7 453 aa11.63□□□□□ -0.55
PCDH9-AS4-201ENST00000456459 LAPTM4AQ15012 233 aa11.62□□□□□ -0.55
PCDH9-AS4-201ENST00000456459 Q6ZNB5 142 aa11.62□□□□□ -0.55
PCDH9-AS4-201ENST00000456459 HLA-CQ95604 372 aa11.62□□□□□ -0.55
PCDH9-AS4-201ENST00000456459 SPRYD7Q5W111 196 aa11.61□□□□□ -0.55
PCDH9-AS4-201ENST00000456459 PRDM9Q9NQV7 894 aa11.61□□□□□ -0.55
PCDH9-AS4-201ENST00000456459 USP46P62068 366 aa11.6□□□□□ -0.55
PCDH9-AS4-201ENST00000456459 AMHR2Q16671 573 aa11.6□□□□□ -0.55
PCDH9-AS4-201ENST00000456459 HOXA2O43364 376 aa11.59□□□□□ -0.55
PCDH9-AS4-201ENST00000456459 NRG2O14511 850 aaPredicted RBP11.58□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 SSTR3P32745 418 aaPredicted RBP11.58□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 TTLL12Q14166 644 aaPredicted RBP11.58□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 Q3C1V9 767 aa11.58□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 PDZRN3Q9UPQ7 1066 aa11.58□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 MSS51Q4VC12 460 aa11.57□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 TRIM67Q6ZTA4 783 aa11.57□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 ZNF598Q86UK7 904 aaKnown RBP11.57□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 FCF1Q9Y324 198 aaKnown RBP11.57□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 GUCA2AQ02747 115 aa11.56□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 NUTM1Q86Y26 1132 aa11.55□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 TRIM66O15016 1216 aa11.54□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 ZNF697Q5TEC3 545 aa11.54□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 GIGYF2Q6Y7W6 1299 aaKnown RBP11.54□□□□□ -0.56
PCDH9-AS4-201ENST00000456459 LCE2BO14633 110 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms