RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 RNF223E7ERA6 249 aa9.79□□□□□ -0.84
R3HDM1-212ENST00000456040 KMT5BQ4FZB7 885 aa9.79□□□□□ -0.84
R3HDM1-212ENST00000456040 SPRYD7Q5W111 196 aa9.78□□□□□ -0.84
R3HDM1-212ENST00000456040 ANKLE1Q8NAG6 615 aa9.78□□□□□ -0.84
R3HDM1-212ENST00000456040 TTC13Q8NBP0 860 aa9.78□□□□□ -0.84
R3HDM1-212ENST00000456040 MYT1Q01538 1121 aa9.77□□□□□ -0.85
R3HDM1-212ENST00000456040 PRR20EP86478 221 aa9.76□□□□□ -0.85
R3HDM1-212ENST00000456040 PRR20CP86479 221 aa9.76□□□□□ -0.85
R3HDM1-212ENST00000456040 PRR20DP86480 221 aa9.76□□□□□ -0.85
R3HDM1-212ENST00000456040 PRR20BP86481 221 aa9.76□□□□□ -0.85
R3HDM1-212ENST00000456040 PRR20AP86496 221 aa9.76□□□□□ -0.85
R3HDM1-212ENST00000456040 BLOC1S3Q6QNY0 202 aa9.76□□□□□ -0.85
R3HDM1-212ENST00000456040 FAM187AA6NFU0 413 aa9.75□□□□□ -0.85
R3HDM1-212ENST00000456040 ZNF697Q5TEC3 545 aa9.75□□□□□ -0.85
R3HDM1-212ENST00000456040 RBM46Q8TBY0 533 aaKnown RBP9.75□□□□□ -0.85
R3HDM1-212ENST00000456040 EYA1Q99502 592 aa9.75□□□□□ -0.85
R3HDM1-212ENST00000456040 DNAJB2P25686 324 aa9.74□□□□□ -0.85
R3HDM1-212ENST00000456040 TRIM67Q6ZTA4 783 aa9.74□□□□□ -0.85
R3HDM1-212ENST00000456040 HAP1P54257 671 aaPredicted RBP9.73□□□□□ -0.85
R3HDM1-212ENST00000456040 NPDC1Q9NQX5 325 aaPredicted RBP9.73□□□□□ -0.85
R3HDM1-212ENST00000456040 NR1I2O75469 434 aa9.71□□□□□ -0.86
R3HDM1-212ENST00000456040 ACTN4O43707 911 aaKnown RBP9.7□□□□□ -0.86
R3HDM1-212ENST00000456040 S1PR4O95977 384 aa9.7□□□□□ -0.86
R3HDM1-212ENST00000456040 TNFRSF10AO00220 468 aa9.69□□□□□ -0.86
R3HDM1-212ENST00000456040 PPEF1O14829 653 aaPredicted RBP9.68□□□□□ -0.86
R3HDM1-212ENST00000456040 TLL1O43897 1013 aa9.68□□□□□ -0.86
R3HDM1-212ENST00000456040 RSPH4AQ5TD94 716 aa9.68□□□□□ -0.86
R3HDM1-212ENST00000456040 ADH1BP00325 375 aa9.67□□□□□ -0.86
R3HDM1-212ENST00000456040 LIAT1Q6ZQX7 453 aa9.67□□□□□ -0.86
R3HDM1-212ENST00000456040 SLC6A16Q9GZN6 736 aa9.67□□□□□ -0.86
R3HDM1-212ENST00000456040 CFHP08603 1231 aa9.66□□□□□ -0.86
R3HDM1-212ENST00000456040 TREML4Q6UXN2 200 aa9.66□□□□□ -0.86
R3HDM1-212ENST00000456040 TMEM134Q9H6X4 195 aa9.66□□□□□ -0.86
R3HDM1-212ENST00000456040 LMOD2Q6P5Q4 547 aa9.65□□□□□ -0.86
R3HDM1-212ENST00000456040 POTECB2RU33 542 aa9.64□□□□□ -0.87
R3HDM1-212ENST00000456040 GDF9O60383 454 aa9.64□□□□□ -0.87
R3HDM1-212ENST00000456040 EMID1Q96A84 441 aaPredicted RBP9.64□□□□□ -0.87
R3HDM1-212ENST00000456040 RCCD1A6NED2 376 aa9.62□□□□□ -0.87
R3HDM1-212ENST00000456040 FOXC1Q12948 553 aa9.62□□□□□ -0.87
R3HDM1-212ENST00000456040 AAASQ9NRG9 546 aa9.62□□□□□ -0.87
R3HDM1-212ENST00000456040 ST8SIA5O15466 376 aa9.6□□□□□ -0.87
R3HDM1-212ENST00000456040 CD2BP2O95400 341 aaKnown RBP9.6□□□□□ -0.87
R3HDM1-212ENST00000456040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.59□□□□□ -0.87
R3HDM1-212ENST00000456040 NUTM2FA1L443 756 aa9.59□□□□□ -0.87
R3HDM1-212ENST00000456040 PTGDRQ13258 359 aa9.59□□□□□ -0.87
R3HDM1-212ENST00000456040 P3H3Q8IVL6 736 aa9.59□□□□□ -0.87
R3HDM1-212ENST00000456040 VSIG10Q8N0Z9 540 aa9.59□□□□□ -0.87
R3HDM1-212ENST00000456040 ADGRG1Q9Y653 693 aa9.59□□□□□ -0.87
R3HDM1-212ENST00000456040 SCUBE3Q8IX30 993 aa9.58□□□□□ -0.88
R3HDM1-212ENST00000456040 SPSB2Q99619 263 aa9.58□□□□□ -0.88
R3HDM1-212ENST00000456040 RPIAP49247 311 aa9.57□□□□□ -0.88
R3HDM1-212ENST00000456040 CYP4X1Q8N118 509 aa9.57□□□□□ -0.88
R3HDM1-212ENST00000456040 KCNV2Q8TDN2 545 aa9.57□□□□□ -0.88
R3HDM1-212ENST00000456040 ARHGEF1Q92888 912 aaKnown RBP9.57□□□□□ -0.88
R3HDM1-212ENST00000456040 C11orf95C9JLR9 678 aaPredicted RBP9.56□□□□□ -0.88
R3HDM1-212ENST00000456040 AXIN1O15169 862 aa9.56□□□□□ -0.88
R3HDM1-212ENST00000456040 WFS1O76024 890 aa9.56□□□□□ -0.88
R3HDM1-212ENST00000456040 OATP04181 439 aa9.56□□□□□ -0.88
R3HDM1-212ENST00000456040 KDM2AQ9Y2K7 1162 aa9.56□□□□□ -0.88
R3HDM1-212ENST00000456040 CRIPAKQ8N1N5 446 aa9.55□□□□□ -0.88
R3HDM1-212ENST00000456040 CTC1Q2NKJ3 1217 aa9.54□□□□□ -0.88
R3HDM1-212ENST00000456040 FCHSD2O94868 740 aa9.53□□□□□ -0.88
R3HDM1-212ENST00000456040 MLLT3P42568 568 aaPredicted RBP9.53□□□□□ -0.88
R3HDM1-212ENST00000456040 PKD2L1Q9P0L9 805 aa9.53□□□□□ -0.88
R3HDM1-212ENST00000456040 ZBTB24O43167 697 aaPredicted RBP9.52□□□□□ -0.89
R3HDM1-212ENST00000456040 SLC10A3P09131 477 aa9.52□□□□□ -0.89
R3HDM1-212ENST00000456040 INSM1Q01101 510 aaPredicted RBP9.52□□□□□ -0.89
R3HDM1-212ENST00000456040 STK17AQ9UEE5 414 aa9.52□□□□□ -0.89
R3HDM1-212ENST00000456040 FAM161AQ3B820 660 aa9.51□□□□□ -0.89
R3HDM1-212ENST00000456040 PLA2G2CQ5R387 149 aa9.51□□□□□ -0.89
R3HDM1-212ENST00000456040 TTC24A2A3L6 582 aaPredicted RBP9.5□□□□□ -0.89
R3HDM1-212ENST00000456040 AVPP01185 164 aa9.5□□□□□ -0.89
R3HDM1-212ENST00000456040 PUS10Q3MIT2 529 aaKnown RBP9.5□□□□□ -0.89
R3HDM1-212ENST00000456040 FMNL1O95466 1100 aaPredicted RBP9.48□□□□□ -0.89
R3HDM1-212ENST00000456040 TOR4AQ9NXH8 423 aa9.48□□□□□ -0.89
R3HDM1-212ENST00000456040 GMPR2Q9P2T1 348 aaKnown RBP9.48□□□□□ -0.89
R3HDM1-212ENST00000456040 FCF1Q9Y324 198 aaKnown RBP9.48□□□□□ -0.89
R3HDM1-212ENST00000456040 LCE2AQ5TA79 106 aaPredicted RBP9.47□□□□□ -0.89
R3HDM1-212ENST00000456040 RDH13Q8NBN7 331 aa9.47□□□□□ -0.89
R3HDM1-212ENST00000456040 SMCPP49901 116 aaPredicted RBP9.46□□□□□ -0.9
R3HDM1-212ENST00000456040 PXYLP1Q8TE99 480 aa9.46□□□□□ -0.9
R3HDM1-212ENST00000456040 DACH1Q9UI36 760 aa9.45□□□□□ -0.9
R3HDM1-212ENST00000456040 ATP6V1AP38606 617 aa9.44□□□□□ -0.9
R3HDM1-212ENST00000456040 SENP2Q9HC62 589 aa9.43□□□□□ -0.9
R3HDM1-212ENST00000456040 WIPF1O43516 503 aa9.42□□□□□ -0.9
R3HDM1-212ENST00000456040 GRIPAP1Q4V328 841 aa9.42□□□□□ -0.9
R3HDM1-212ENST00000456040 FAM181BA6NEQ2 426 aa9.41□□□□□ -0.9
R3HDM1-212ENST00000456040 HIC1Q14526 733 aa9.41□□□□□ -0.9
R3HDM1-212ENST00000456040 MORN1Q5T089 497 aa9.41□□□□□ -0.9
R3HDM1-212ENST00000456040 DAXXQ9UER7 740 aaPredicted RBP9.41□□□□□ -0.9
R3HDM1-212ENST00000456040 METTL3Q86U44 580 aaKnown RBP9.4□□□□□ -0.9
R3HDM1-212ENST00000456040 SULF1Q8IWU6 871 aa9.4□□□□□ -0.9
R3HDM1-212ENST00000456040 SNIP1Q8TAD8 396 aaKnown RBP9.4□□□□□ -0.9
R3HDM1-212ENST00000456040 SALL2Q9Y467 1007 aaPredicted RBP9.4□□□□□ -0.9
R3HDM1-212ENST00000456040 DDX11L8A8MPP1 907 aa9.39□□□□□ -0.91
R3HDM1-212ENST00000456040 SEMA3EO15041 775 aa9.39□□□□□ -0.91
R3HDM1-212ENST00000456040 FUT2Q10981 343 aa9.39□□□□□ -0.91
R3HDM1-212ENST00000456040 NFX1Q12986 1120 aaKnown RBP9.39□□□□□ -0.91
R3HDM1-212ENST00000456040 KIFC2Q96AC6 838 aa9.38□□□□□ -0.91
R3HDM1-212ENST00000456040 THAP11Q96EK4 314 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms