RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 RAPGEF3O95398 923 aa8.64□□□□□ -1.03
MSH6-205ENST00000454137 VSIG10Q8N0Z9 540 aa8.64□□□□□ -1.03
MSH6-205ENST00000454137 EFCAB6Q5THR3 1501 aa8.64□□□□□ -1.03
MSH6-205ENST00000454137 ARHGEF40Q8TER5 1519 aa8.64□□□□□ -1.03
MSH6-205ENST00000454137 SPHKAPQ2M3C7 1700 aa8.63□□□□□ -1.03
MSH6-205ENST00000454137 RGL2O15211 777 aa8.63□□□□□ -1.03
MSH6-205ENST00000454137 TRPM2O94759 1503 aa8.63□□□□□ -1.03
MSH6-205ENST00000454137 ARHGAP31Q2M1Z3 1444 aa8.63□□□□□ -1.03
MSH6-205ENST00000454137 KIF3BO15066 747 aa8.62□□□□□ -1.03
MSH6-205ENST00000454137 GSE1Q14687 1217 aa8.62□□□□□ -1.03
MSH6-205ENST00000454137 STAC3Q96MF2 364 aa8.62□□□□□ -1.03
MSH6-205ENST00000454137 PLA2R1Q13018 1463 aa8.62□□□□□ -1.03
MSH6-205ENST00000454137 CEP152O94986 1710 aa8.61□□□□□ -1.03
MSH6-205ENST00000454137 COL17A1Q9UMD9 1497 aaPredicted RBP8.61□□□□□ -1.03
MSH6-205ENST00000454137 CCDC144AA2RUR9 1427 aa8.61□□□□□ -1.03
MSH6-205ENST00000454137 YEATS2Q9ULM3 1422 aa8.61□□□□□ -1.03
MSH6-205ENST00000454137 MYT1LQ9UL68 1186 aa8.6□□□□□ -1.03
MSH6-205ENST00000454137 CAMSAP1Q5T5Y3 1602 aa8.6□□□□□ -1.03
MSH6-205ENST00000454137 UHRF1BP1Q6BDS2 1440 aa8.6□□□□□ -1.03
MSH6-205ENST00000454137 ABCC3O15438 1527 aa8.59□□□□□ -1.03
MSH6-205ENST00000454137 CNTLNQ9NXG0 1405 aa8.58□□□□□ -1.04
MSH6-205ENST00000454137 L3MBTL2Q969R5 705 aa8.58□□□□□ -1.04
MSH6-205ENST00000454137 KIF1BO60333 1816 aa8.58□□□□□ -1.04
MSH6-205ENST00000454137 PAXIP1Q6ZW49 1069 aaPredicted RBP8.57□□□□□ -1.04
MSH6-205ENST00000454137 TAOK2Q9UL54 1235 aa8.57□□□□□ -1.04
MSH6-205ENST00000454137 NOS1P29475 1434 aa8.56□□□□□ -1.04
MSH6-205ENST00000454137 SPATA31E1Q6ZUB1 1445 aa8.56□□□□□ -1.04
MSH6-205ENST00000454137 PIK3C2BO00750 1634 aa8.56□□□□□ -1.04
MSH6-205ENST00000454137 PRR29P0C7W0 189 aa8.56□□□□□ -1.04
MSH6-205ENST00000454137 SPRYD3Q8NCJ5 442 aa8.56□□□□□ -1.04
MSH6-205ENST00000454137 NPATQ14207 1427 aa8.55□□□□□ -1.04
MSH6-205ENST00000454137 CFAP44Q96MT7 982 aa8.55□□□□□ -1.04
MSH6-205ENST00000454137 MROH2AA6NES4 1674 aa8.55□□□□□ -1.04
MSH6-205ENST00000454137 WASHC2CQ9Y4E1 1318 aa8.54□□□□□ -1.04
MSH6-205ENST00000454137 LAMC1P11047 1609 aa8.54□□□□□ -1.04
MSH6-205ENST00000454137 CLTCL1P53675 1640 aa8.54□□□□□ -1.04
MSH6-205ENST00000454137 CHGAP10645 457 aaKnown RBP8.54□□□□□ -1.04
MSH6-205ENST00000454137 BCANQ96GW7 911 aa8.54□□□□□ -1.04
MSH6-205ENST00000454137 CLEC11AQ9Y240 323 aa8.54□□□□□ -1.04
MSH6-205ENST00000454137 SIGLEC1Q9BZZ2 1709 aa8.54□□□□□ -1.04
MSH6-205ENST00000454137 IFT172Q9UG01 1749 aa8.54□□□□□ -1.04
MSH6-205ENST00000454137 KIAA1210Q9ULL0 1709 aa8.54□□□□□ -1.04
MSH6-205ENST00000454137 PREX1Q8TCU6 1659 aa8.53□□□□□ -1.04
MSH6-205ENST00000454137 RALGAPBQ86X10 1494 aa8.53□□□□□ -1.04
MSH6-205ENST00000454137 NUBP1P53384 320 aa8.53□□□□□ -1.04
MSH6-205ENST00000454137 GGT6Q6P531 493 aa8.53□□□□□ -1.04
MSH6-205ENST00000454137 GTF3C3Q9Y5Q9 886 aa8.53□□□□□ -1.04
MSH6-205ENST00000454137 REM2Q8IYK8 340 aaPredicted RBP8.52□□□□□ -1.05
MSH6-205ENST00000454137 SLC52A1Q9NWF4 448 aa8.52□□□□□ -1.05
MSH6-205ENST00000454137 ADGRB3O60242 1522 aa8.52□□□□□ -1.05
MSH6-205ENST00000454137 KDM5AP29375 1690 aaKnown RBP8.52□□□□□ -1.05
MSH6-205ENST00000454137 POLR1AO95602 1720 aaPredicted RBP8.51□□□□□ -1.05
MSH6-205ENST00000454137 MYOM2P54296 1465 aa8.51□□□□□ -1.05
MSH6-205ENST00000454137 TRPM1Q7Z4N2 1603 aa8.51□□□□□ -1.05
MSH6-205ENST00000454137 CLTCQ00610 1675 aaKnown RBP8.51□□□□□ -1.05
MSH6-205ENST00000454137 DCAF8Q5TAQ9 597 aa8.51□□□□□ -1.05
MSH6-205ENST00000454137 FAM212AQ96EL1 285 aa8.51□□□□□ -1.05
MSH6-205ENST00000454137 PRAG1Q86YV5 1406 aa8.51□□□□□ -1.05
MSH6-205ENST00000454137 SYNMO15061 1565 aa8.51□□□□□ -1.05
MSH6-205ENST00000454137 SPATA31D1Q6ZQQ2 1576 aa8.51□□□□□ -1.05
MSH6-205ENST00000454137 RPGRIP1LQ68CZ1 1315 aa8.51□□□□□ -1.05
MSH6-205ENST00000454137 CFAP65Q6ZU64 1925 aaKnown RBP8.5□□□□□ -1.05
MSH6-205ENST00000454137 GPRASP1Q5JY77 1395 aa8.5□□□□□ -1.05
MSH6-205ENST00000454137 HS6ST3Q8IZP7 471 aa8.5□□□□□ -1.05
MSH6-205ENST00000454137 PPLO60437 1756 aa8.5□□□□□ -1.05
MSH6-205ENST00000454137 NRXN1Q9ULB1 1477 aa8.5□□□□□ -1.05
MSH6-205ENST00000454137 NBPF8Q3BBV2 869 aa8.49□□□□□ -1.05
MSH6-205ENST00000454137 CREBZFQ9NS37 354 aa8.49□□□□□ -1.05
MSH6-205ENST00000454137 MADDQ8WXG6 1647 aa8.49□□□□□ -1.05
MSH6-205ENST00000454137 ERVK-7P63135 1459 aa8.49□□□□□ -1.05
MSH6-205ENST00000454137 ZFYVE9O95405 1425 aa8.48□□□□□ -1.05
MSH6-205ENST00000454137 EIF4G2P78344 907 aaKnown RBP eCLIP8.48□□□□□ -1.05
MSH6-205ENST00000454137 DCAF11Q8TEB1 546 aa8.48□□□□□ -1.05
MSH6-205ENST00000454137 ARID4BQ4LE39 1312 aaPredicted RBP8.47□□□□□ -1.05
MSH6-205ENST00000454137 TMEM131LA2VDJ0 1609 aa8.47□□□□□ -1.05
MSH6-205ENST00000454137 RIOK3O14730 519 aaKnown RBP8.46□□□□□ -1.06
MSH6-205ENST00000454137 FER1L4A9Z1Z3 1794 aa8.45□□□□□ -1.06
MSH6-205ENST00000454137 UGGT1Q9NYU2 1555 aa8.45□□□□□ -1.06
MSH6-205ENST00000454137 SETBP1Q9Y6X0 1596 aa8.45□□□□□ -1.06
MSH6-205ENST00000454137 CHRM1P11229 460 aaPredicted RBP8.45□□□□□ -1.06
MSH6-205ENST00000454137 YTHDC1Q96MU7 727 aaKnown RBP8.45□□□□□ -1.06
MSH6-205ENST00000454137 ZMYM3Q14202 1370 aa8.45□□□□□ -1.06
MSH6-205ENST00000454137 HIRIP3Q9BW71 556 aaPredicted RBP8.44□□□□□ -1.06
MSH6-205ENST00000454137 ESF1Q9H501 851 aaKnown RBP8.44□□□□□ -1.06
MSH6-205ENST00000454137 NEXMIFQ5QGS0 1516 aa8.44□□□□□ -1.06
MSH6-205ENST00000454137 IQGAP1P46940 1657 aa8.43□□□□□ -1.06
MSH6-205ENST00000454137 MYO5BQ9ULV0 1848 aa8.43□□□□□ -1.06
MSH6-205ENST00000454137 HSPA5P11021 654 aaKnown RBP8.43□□□□□ -1.06
MSH6-205ENST00000454137 MNX1P50219 401 aaPredicted RBP8.43□□□□□ -1.06
MSH6-205ENST00000454137 IDI1Q13907 227 aa8.43□□□□□ -1.06
MSH6-205ENST00000454137 RGL3Q3MIN7 710 aa8.43□□□□□ -1.06
MSH6-205ENST00000454137 NLRP1Q9C000 1473 aa8.43□□□□□ -1.06
MSH6-205ENST00000454137 C3P01024 1663 aa8.43□□□□□ -1.06
MSH6-205ENST00000454137 VGFO15240 615 aaPredicted RBP8.42□□□□□ -1.06
MSH6-205ENST00000454137 RNF25Q96BH1 459 aaPredicted RBP8.42□□□□□ -1.06
MSH6-205ENST00000454137 KDM2AQ9Y2K7 1162 aa8.42□□□□□ -1.06
MSH6-205ENST00000454137 ROCK2O75116 1388 aaKnown RBP8.42□□□□□ -1.06
MSH6-205ENST00000454137 USP47Q96K76 1375 aa8.42□□□□□ -1.06
MSH6-205ENST00000454137 PIK3C2GO75747 1445 aa8.42□□□□□ -1.06
MSH6-205ENST00000454137 ADAMTSL3P82987 1691 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms