RNA–Protein interactions for RNA: ENST00000453514.5

PAPD4-204, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PAPD4, Length 3,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-204ENST00000453514 STAG3Q9UJ98 1225 aa12.01□□□□□ -0.49
PAPD4-204ENST00000453514 ADGRL1O94910 1474 aa12.01□□□□□ -0.49
PAPD4-204ENST00000453514 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
PAPD4-204ENST00000453514 RRP9O43818 475 aaKnown RBP12□□□□□ -0.49
PAPD4-204ENST00000453514 POLR3GLQ9BT43 218 aa12□□□□□ -0.49
PAPD4-204ENST00000453514 SPHKAPQ2M3C7 1700 aa12□□□□□ -0.49
PAPD4-204ENST00000453514 IQGAP1P46940 1657 aa12□□□□□ -0.49
PAPD4-204ENST00000453514 MADDQ8WXG6 1647 aa11.99□□□□□ -0.49
PAPD4-204ENST00000453514 RTEL1-TNFRSF6BF6WH68 1400 aa11.98□□□□□ -0.49
PAPD4-204ENST00000453514 IFT172Q9UG01 1749 aa11.98□□□□□ -0.49
PAPD4-204ENST00000453514 PPM1GO15355 546 aaPredicted RBP11.98□□□□□ -0.49
PAPD4-204ENST00000453514 NEURL4Q96JN8 1562 aa11.98□□□□□ -0.49
PAPD4-204ENST00000453514 CLTCL1P53675 1640 aa11.97□□□□□ -0.49
PAPD4-204ENST00000453514 CNGB1Q14028 1251 aaPredicted RBP11.97□□□□□ -0.49
PAPD4-204ENST00000453514 PTPRTO14522 1441 aa11.97□□□□□ -0.49
PAPD4-204ENST00000453514 KIDINS220Q9ULH0 1771 aa11.97□□□□□ -0.49
PAPD4-204ENST00000453514 TRPM2O94759 1503 aa11.97□□□□□ -0.49
PAPD4-204ENST00000453514 TET3O43151 1660 aa11.97□□□□□ -0.49
PAPD4-204ENST00000453514 FRAT1Q92837 279 aaPredicted RBP11.97□□□□□ -0.49
PAPD4-204ENST00000453514 EIF2AK4Q9P2K8 1649 aaKnown RBP11.96□□□□□ -0.49
PAPD4-204ENST00000453514 TSPOAP1O95153 1857 aa11.94□□□□□ -0.5
PAPD4-204ENST00000453514 HNRNPUQ00839 825 aaKnown RBP eCLIP11.94□□□□□ -0.5
PAPD4-204ENST00000453514 COL17A1Q9UMD9 1497 aaPredicted RBP11.93□□□□□ -0.5
PAPD4-204ENST00000453514 MYOM1P52179 1685 aa11.93□□□□□ -0.5
PAPD4-204ENST00000453514 ATP7AQ04656 1500 aa11.93□□□□□ -0.5
PAPD4-204ENST00000453514 HSP90AA1P07900 732 aaKnown RBP11.93□□□□□ -0.5
PAPD4-204ENST00000453514 NUTM2DQ5VT03 806 aaPredicted RBP11.93□□□□□ -0.5
PAPD4-204ENST00000453514 AEBP2Q6ZN18 517 aaPredicted RBP11.92□□□□□ -0.5
PAPD4-204ENST00000453514 KIAA1210Q9ULL0 1709 aa11.92□□□□□ -0.5
PAPD4-204ENST00000453514 CCDC144AA2RUR9 1427 aa11.92□□□□□ -0.5
PAPD4-204ENST00000453514 LRPPRCP42704 1394 aaKnown RBP11.92□□□□□ -0.5
PAPD4-204ENST00000453514 DCAF11Q8TEB1 546 aa11.91□□□□□ -0.5
PAPD4-204ENST00000453514 TESK2Q96S53 571 aa11.91□□□□□ -0.5
PAPD4-204ENST00000453514 KANK1Q14678 1352 aa11.91□□□□□ -0.5
PAPD4-204ENST00000453514 MROH2AA6NES4 1674 aa11.91□□□□□ -0.5
PAPD4-204ENST00000453514 FRMPD1Q5SYB0 1578 aa11.9□□□□□ -0.5
PAPD4-204ENST00000453514 ST20-MTHFSA0A0A6YYL1 179 aa11.9□□□□□ -0.5
PAPD4-204ENST00000453514 PER1O15534 1290 aaPredicted RBP11.9□□□□□ -0.5
PAPD4-204ENST00000453514 NBPF1Q3BBV0 1214 aa11.9□□□□□ -0.5
PAPD4-204ENST00000453514 RRAGDQ9NQL2 400 aaPredicted RBP11.9□□□□□ -0.5
PAPD4-204ENST00000453514 ZBED9Q6R2W3 1325 aa11.9□□□□□ -0.51
PAPD4-204ENST00000453514 NPM2Q86SE8 214 aaKnown RBP11.89□□□□□ -0.51
PAPD4-204ENST00000453514 PPRC1Q5VV67 1664 aaKnown RBP11.89□□□□□ -0.51
PAPD4-204ENST00000453514 ROCK2O75116 1388 aaKnown RBP11.89□□□□□ -0.51
PAPD4-204ENST00000453514 NAP1L5Q96NT1 182 aaPredicted RBP11.88□□□□□ -0.51
PAPD4-204ENST00000453514 LMTK2Q8IWU2 1503 aa11.87□□□□□ -0.51
PAPD4-204ENST00000453514 PARD3Q8TEW0 1356 aa11.87□□□□□ -0.51
PAPD4-204ENST00000453514 DISP3Q9P2K9 1392 aa11.87□□□□□ -0.51
PAPD4-204ENST00000453514 RNF123Q5XPI4 1314 aa11.87□□□□□ -0.51
PAPD4-204ENST00000453514 PNISRQ8TF01 805 aaKnown RBP11.87□□□□□ -0.51
PAPD4-204ENST00000453514 PRDM4Q9UKN5 801 aa11.87□□□□□ -0.51
PAPD4-204ENST00000453514 CEBPAP49715 358 aaPredicted RBP11.86□□□□□ -0.51
PAPD4-204ENST00000453514 CARD11Q9BXL7 1154 aa11.86□□□□□ -0.51
PAPD4-204ENST00000453514 EFCAB6Q5THR3 1501 aa11.86□□□□□ -0.51
PAPD4-204ENST00000453514 NFKBIBQ15653 356 aa11.86□□□□□ -0.51
PAPD4-204ENST00000453514 NRXN1Q9ULB1 1477 aa11.85□□□□□ -0.51
PAPD4-204ENST00000453514 ABCA6Q8N139 1617 aa11.85□□□□□ -0.51
PAPD4-204ENST00000453514 UGGT1Q9NYU2 1555 aa11.84□□□□□ -0.51
PAPD4-204ENST00000453514 SIGLEC1Q9BZZ2 1709 aa11.84□□□□□ -0.51
PAPD4-204ENST00000453514 MYO3AQ8NEV4 1616 aa11.84□□□□□ -0.51
PAPD4-204ENST00000453514 SMG6Q86US8 1419 aaKnown RBP11.84□□□□□ -0.51
PAPD4-204ENST00000453514 MAP3K4Q9Y6R4 1608 aa11.84□□□□□ -0.51
PAPD4-204ENST00000453514 MRS2Q9HD23 443 aa11.83□□□□□ -0.51
PAPD4-204ENST00000453514 ZC3H13Q5T200 1668 aaKnown RBP11.83□□□□□ -0.52
PAPD4-204ENST00000453514 YEATS2Q9ULM3 1422 aa11.83□□□□□ -0.52
PAPD4-204ENST00000453514 KTN1Q86UP2 1357 aaKnown RBP11.83□□□□□ -0.52
PAPD4-204ENST00000453514 KIF1BO60333 1816 aa11.82□□□□□ -0.52
PAPD4-204ENST00000453514 FBXO31Q5XUX0 539 aaPredicted RBP11.82□□□□□ -0.52
PAPD4-204ENST00000453514 PPLO60437 1756 aa11.82□□□□□ -0.52
PAPD4-204ENST00000453514 ZNF518AQ6AHZ1 1483 aa11.82□□□□□ -0.52
PAPD4-204ENST00000453514 ZMYM4Q5VZL5 1548 aa11.82□□□□□ -0.52
PAPD4-204ENST00000453514 RGS3P49796 1198 aa11.81□□□□□ -0.52
PAPD4-204ENST00000453514 TAF7LQ5H9L4 462 aa11.81□□□□□ -0.52
PAPD4-204ENST00000453514 CALD1Q05682 793 aaKnown RBP11.81□□□□□ -0.52
PAPD4-204ENST00000453514 MYOM2P54296 1465 aa11.8□□□□□ -0.52
PAPD4-204ENST00000453514 PIK3C2BO00750 1634 aa11.8□□□□□ -0.52
PAPD4-204ENST00000453514 SYNMO15061 1565 aa11.8□□□□□ -0.52
PAPD4-204ENST00000453514 ADGRB3O60242 1522 aa11.8□□□□□ -0.52
PAPD4-204ENST00000453514 BRD4O60885 1362 aaPredicted RBP11.8□□□□□ -0.52
PAPD4-204ENST00000453514 FAM9BQ8IZU0 186 aa11.8□□□□□ -0.52
PAPD4-204ENST00000453514 RICTORQ6R327 1708 aa11.79□□□□□ -0.52
PAPD4-204ENST00000453514 PNNQ9H307 717 aaKnown RBP11.79□□□□□ -0.52
PAPD4-204ENST00000453514 HECW2Q9P2P5 1572 aa11.79□□□□□ -0.52
PAPD4-204ENST00000453514 CFAP74Q9C0B2 1584 aa11.79□□□□□ -0.52
PAPD4-204ENST00000453514 MLH3Q9UHC1 1453 aa11.78□□□□□ -0.52
PAPD4-204ENST00000453514 POGZQ7Z3K3 1410 aa11.77□□□□□ -0.52
PAPD4-204ENST00000453514 INSRP06213 1382 aa11.77□□□□□ -0.53
PAPD4-204ENST00000453514 MYBBP1AQ9BQG0 1328 aaKnown RBP11.76□□□□□ -0.53
PAPD4-204ENST00000453514 BLMP54132 1417 aaPredicted RBP11.76□□□□□ -0.53
PAPD4-204ENST00000453514 CENPJQ9HC77 1338 aaPredicted RBP11.76□□□□□ -0.53
PAPD4-204ENST00000453514 NEO1Q92859 1461 aa11.76□□□□□ -0.53
PAPD4-204ENST00000453514 SETBP1Q9Y6X0 1596 aa11.75□□□□□ -0.53
PAPD4-204ENST00000453514 ADGRB1O14514 1584 aa11.75□□□□□ -0.53
PAPD4-204ENST00000453514 SCAF11Q99590 1463 aaKnown RBP11.75□□□□□ -0.53
PAPD4-204ENST00000453514 KLHL34Q8N239 644 aa11.75□□□□□ -0.53
PAPD4-204ENST00000453514 SAFB2Q14151 953 aaKnown RBP eCLIP11.74□□□□□ -0.53
PAPD4-204ENST00000453514 DIP2BQ9P265 1576 aa11.74□□□□□ -0.53
PAPD4-204ENST00000453514 RALBP1Q15311 655 aa11.74□□□□□ -0.53
PAPD4-204ENST00000453514 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
PAPD4-204ENST00000453514 CAMSAP1Q5T5Y3 1602 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms