RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 ANP32CO43423 234 aa34.2■■■■□ 3.07
MCF2L-219ENST00000453297 ADGRF5Q8IZF2 1346 aa34.2■■■■□ 3.07
MCF2L-219ENST00000453297 ERVK-7P63135 1459 aa34.2■■■■□ 3.07
MCF2L-219ENST00000453297 RPGRIP1LQ68CZ1 1315 aa34.2■■■■□ 3.07
MCF2L-219ENST00000453297 IDI1Q13907 227 aa34.2■■■■□ 3.07
MCF2L-219ENST00000453297 IQGAP1P46940 1657 aa34.19■■■■□ 3.06
MCF2L-219ENST00000453297 FBXO31Q5XUX0 539 aaPredicted RBP34.18■■■■□ 3.06
MCF2L-219ENST00000453297 MYO5BQ9ULV0 1848 aa34.11■■■■□ 3.05
MCF2L-219ENST00000453297 TMEM131LA2VDJ0 1609 aa34.11■■■■□ 3.05
MCF2L-219ENST00000453297 SPATA31D1Q6ZQQ2 1576 aa34.11■■■■□ 3.05
MCF2L-219ENST00000453297 NEXMIFQ5QGS0 1516 aa34.11■■■■□ 3.05
MCF2L-219ENST00000453297 CFAP70Q5T0N1 1121 aa34.1■■■■□ 3.05
MCF2L-219ENST00000453297 SCAF11Q99590 1463 aaKnown RBP34.1■■■■□ 3.05
MCF2L-219ENST00000453297 YTHDC1Q96MU7 727 aaKnown RBP34.09■■■■□ 3.05
MCF2L-219ENST00000453297 POLR3GLQ9BT43 218 aa34.08■■■■□ 3.05
MCF2L-219ENST00000453297 ESF1Q9H501 851 aaKnown RBP34.08■■■■□ 3.05
MCF2L-219ENST00000453297 TESK2Q96S53 571 aa34.07■■■■□ 3.04
MCF2L-219ENST00000453297 PIK3C2GO75747 1445 aa34.07■■■■□ 3.04
MCF2L-219ENST00000453297 CCER2I3L3R5 266 aa34.04■■■■□ 3.04
MCF2L-219ENST00000453297 ZMYM3Q14202 1370 aa34.04■■■■□ 3.04
MCF2L-219ENST00000453297 SETBP1Q9Y6X0 1596 aa34.02■■■■□ 3.04
MCF2L-219ENST00000453297 VGFO15240 615 aaPredicted RBP34.01■■■■□ 3.03
MCF2L-219ENST00000453297 C14orf93Q9H972 538 aaKnown RBP33.99■■■■□ 3.03
MCF2L-219ENST00000453297 ZFYVE9O95405 1425 aa33.99■■■■□ 3.03
MCF2L-219ENST00000453297 CENPBP07199 599 aaPredicted RBP33.97■■■■□ 3.03
MCF2L-219ENST00000453297 EIF3AQ14152 1382 aaKnown RBP33.97■■■■□ 3.03
MCF2L-219ENST00000453297 DISP3Q9P2K9 1392 aa33.97■■■■□ 3.03
MCF2L-219ENST00000453297 TMF1P82094 1093 aa33.95■■■■□ 3.02
MCF2L-219ENST00000453297 NUTM2DQ5VT03 806 aaPredicted RBP33.94■■■■□ 3.02
MCF2L-219ENST00000453297 ADGRB1O14514 1584 aa33.92■■■■□ 3.02
MCF2L-219ENST00000453297 STAG3Q9UJ98 1225 aa33.9■■■■□ 3.02
MCF2L-219ENST00000453297 A2ML1A8K2U0 1454 aa33.89■■■■□ 3.02
MCF2L-219ENST00000453297 PRKRIP1Q9H875 184 aaPredicted RBP33.89■■■■□ 3.02
MCF2L-219ENST00000453297 MYO3AQ8NEV4 1616 aa33.87■■■■□ 3.01
MCF2L-219ENST00000453297 TNRQ92752 1358 aa33.84■■■■□ 3.01
MCF2L-219ENST00000453297 TMEM132EQ6IEE7 984 aa33.82■■■■□ 3
MCF2L-219ENST00000453297 FER1L4A9Z1Z3 1794 aa33.81■■■■□ 3
MCF2L-219ENST00000453297 SLC24A1O60721 1099 aa33.78■■■■□ 3
MCF2L-219ENST00000453297 TRAK1Q9UPV9 953 aa33.77■■■■□ 3
MCF2L-219ENST00000453297 C3P01024 1663 aa33.77■■■■□ 3
MCF2L-219ENST00000453297 RIMS2Q9UQ26 1411 aa33.77■■■■□ 3
MCF2L-219ENST00000453297 CDCA8Q53HL2 280 aa33.76■■■■□ 3
MCF2L-219ENST00000453297 KDM5AP29375 1690 aaKnown RBP33.76■■■□□ 2.99
MCF2L-219ENST00000453297 SBNO2Q9Y2G9 1366 aa33.75■■■□□ 2.99
MCF2L-219ENST00000453297 CENPJQ9HC77 1338 aaPredicted RBP33.74■■■□□ 2.99
MCF2L-219ENST00000453297 ASXL1Q8IXJ9 1541 aa33.74■■■□□ 2.99
MCF2L-219ENST00000453297 QRICH2Q9H0J4 1663 aa33.72■■■□□ 2.99
MCF2L-219ENST00000453297 ARHGEF28Q8N1W1 1705 aaKnown RBP33.71■■■□□ 2.99
MCF2L-219ENST00000453297 UBR1Q8IWV7 1749 aa33.71■■■□□ 2.99
MCF2L-219ENST00000453297 ALKQ9UM73 1620 aa33.71■■■□□ 2.99
MCF2L-219ENST00000453297 CEBPAP49715 358 aaPredicted RBP33.7■■■□□ 2.99
MCF2L-219ENST00000453297 PER1O15534 1290 aaPredicted RBP33.67■■■□□ 2.98
MCF2L-219ENST00000453297 SENP3Q9H4L4 574 aaPredicted RBP33.67■■■□□ 2.98
MCF2L-219ENST00000453297 NLRP1Q9C000 1473 aa33.66■■■□□ 2.98
MCF2L-219ENST00000453297 PANK3Q9H999 370 aa33.66■■■□□ 2.98
MCF2L-219ENST00000453297 MYOM1P52179 1685 aa33.66■■■□□ 2.98
MCF2L-219ENST00000453297 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.65■■■□□ 2.98
MCF2L-219ENST00000453297 CCDC184Q52MB2 194 aa33.65■■■□□ 2.98
MCF2L-219ENST00000453297 CNGB1Q14028 1251 aaPredicted RBP33.63■■■□□ 2.97
MCF2L-219ENST00000453297 SETD1AO15047 1707 aaKnown RBP33.61■■■□□ 2.97
MCF2L-219ENST00000453297 KTN1Q86UP2 1357 aaKnown RBP33.6■■■□□ 2.97
MCF2L-219ENST00000453297 YTHDC2Q9H6S0 1430 aaKnown RBP33.59■■■□□ 2.97
MCF2L-219ENST00000453297 HDGFP51858 240 aaKnown RBP33.59■■■□□ 2.97
MCF2L-219ENST00000453297 NRXN3Q9Y4C0 1643 aa33.58■■■□□ 2.97
MCF2L-219ENST00000453297 PTPRMP28827 1452 aa33.58■■■□□ 2.97
MCF2L-219ENST00000453297 TMEM2Q9UHN6 1383 aa33.58■■■□□ 2.97
MCF2L-219ENST00000453297 MRS2Q9HD23 443 aa33.57■■■□□ 2.96
MCF2L-219ENST00000453297 STK26Q9P289 416 aa33.57■■■□□ 2.96
MCF2L-219ENST00000453297 RALBP1Q15311 655 aa33.56■■■□□ 2.96
MCF2L-219ENST00000453297 RIMS1Q86UR5 1692 aaKnown RBP33.53■■■□□ 2.96
MCF2L-219ENST00000453297 PLPPR3Q6T4P5 718 aa33.53■■■□□ 2.96
MCF2L-219ENST00000453297 PARD3Q8TEW0 1356 aa33.51■■■□□ 2.95
MCF2L-219ENST00000453297 ADAMTSL3P82987 1691 aa33.49■■■□□ 2.95
MCF2L-219ENST00000453297 TULP4Q9NRJ4 1543 aa33.48■■■□□ 2.95
MCF2L-219ENST00000453297 MYBBP1AQ9BQG0 1328 aaKnown RBP33.48■■■□□ 2.95
MCF2L-219ENST00000453297 LRPPRCP42704 1394 aaKnown RBP33.46■■■□□ 2.95
MCF2L-219ENST00000453297 EVC2Q86UK5 1308 aa33.46■■■□□ 2.95
MCF2L-219ENST00000453297 DLC1Q96QB1 1528 aa33.45■■■□□ 2.95
MCF2L-219ENST00000453297 PUS7Q96PZ0 661 aaKnown RBP33.45■■■□□ 2.95
MCF2L-219ENST00000453297 KNSTRNQ9Y448 316 aa33.45■■■□□ 2.95
MCF2L-219ENST00000453297 PRAM1Q96QH2 718 aa33.44■■■□□ 2.94
MCF2L-219ENST00000453297 SAFB2Q14151 953 aaKnown RBP eCLIP33.43■■■□□ 2.94
MCF2L-219ENST00000453297 CC2D1BQ5T0F9 858 aaKnown RBP33.43■■■□□ 2.94
MCF2L-219ENST00000453297 SLIT1O75093 1534 aa33.42■■■□□ 2.94
MCF2L-219ENST00000453297 ARHGAP23Q9P227 1491 aa33.42■■■□□ 2.94
MCF2L-219ENST00000453297 POGKQ9P215 609 aa33.42■■■□□ 2.94
MCF2L-219ENST00000453297 LTKP29376 864 aa33.41■■■□□ 2.94
MCF2L-219ENST00000453297 ABCC11Q96J66 1382 aa33.41■■■□□ 2.94
MCF2L-219ENST00000453297 METP08581 1390 aa33.4■■■□□ 2.94
MCF2L-219ENST00000453297 FAM9BQ8IZU0 186 aa33.4■■■□□ 2.94
MCF2L-219ENST00000453297 BRD4O60885 1362 aaPredicted RBP33.4■■■□□ 2.94
MCF2L-219ENST00000453297 PLEKHG1Q9ULL1 1385 aa33.39■■■□□ 2.94
MCF2L-219ENST00000453297 AMER1Q5JTC6 1135 aaPredicted RBP33.38■■■□□ 2.93
MCF2L-219ENST00000453297 TXNDC2Q86VQ3 553 aa33.37■■■□□ 2.93
MCF2L-219ENST00000453297 THEMISQ8N1K5 641 aaPredicted RBP33.37■■■□□ 2.93
MCF2L-219ENST00000453297 TMC1Q8TDI8 760 aa33.37■■■□□ 2.93
MCF2L-219ENST00000453297 BCANQ96GW7 911 aa33.37■■■□□ 2.93
MCF2L-219ENST00000453297 ADAMTS13Q76LX8 1427 aa33.35■■■□□ 2.93
MCF2L-219ENST00000453297 KNDC1Q76NI1 1749 aa33.35■■■□□ 2.93
MCF2L-219ENST00000453297 EID1Q9Y6B2 187 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms