RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 CDK11BP21127 795 aaKnown RBP10.51□□□□□ -0.73
SMCO1-202ENST00000452776 FXR2P51116 673 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMCO1-202ENST00000452776 PRIMPOLQ96LW4 560 aa10.51□□□□□ -0.73
SMCO1-202ENST00000452776 ANKRD30AQ9BXX3 1397 aa10.5□□□□□ -0.73
SMCO1-202ENST00000452776 HSCBQ8IWL3 235 aa10.5□□□□□ -0.73
SMCO1-202ENST00000452776 REM2Q8IYK8 340 aaPredicted RBP10.5□□□□□ -0.73
SMCO1-202ENST00000452776 NGEFQ8N5V2 710 aa10.5□□□□□ -0.73
SMCO1-202ENST00000452776 PMFBP1Q8TBY8 1022 aa10.5□□□□□ -0.73
SMCO1-202ENST00000452776 TMEM51Q9NW97 253 aa10.5□□□□□ -0.73
SMCO1-202ENST00000452776 FGD5Q6ZNL6 1462 aa10.5□□□□□ -0.73
SMCO1-202ENST00000452776 TEX14Q8IWB6 1497 aa10.5□□□□□ -0.73
SMCO1-202ENST00000452776 MTUS2Q5JR59 1369 aa10.49□□□□□ -0.73
SMCO1-202ENST00000452776 SLC20A2Q08357 652 aa10.49□□□□□ -0.73
SMCO1-202ENST00000452776 PDE3AQ14432 1141 aa10.49□□□□□ -0.73
SMCO1-202ENST00000452776 CDCA7LQ96GN5 454 aa10.49□□□□□ -0.73
SMCO1-202ENST00000452776 CCDC39Q9UFE4 941 aa10.49□□□□□ -0.73
SMCO1-202ENST00000452776 PARD3Q8TEW0 1356 aa10.49□□□□□ -0.73
SMCO1-202ENST00000452776 POLA2Q14181 598 aa10.49□□□□□ -0.73
SMCO1-202ENST00000452776 GCC2Q8IWJ2 1684 aa10.48□□□□□ -0.73
SMCO1-202ENST00000452776 SKAP1Q86WV1 359 aa10.48□□□□□ -0.73
SMCO1-202ENST00000452776 IGF1RP08069 1367 aa10.48□□□□□ -0.73
SMCO1-202ENST00000452776 PCF11O94913 1555 aaKnown RBP10.47□□□□□ -0.73
SMCO1-202ENST00000452776 LHX8Q68G74 356 aa10.47□□□□□ -0.73
SMCO1-202ENST00000452776 SNX21Q969T3 373 aa10.47□□□□□ -0.73
SMCO1-202ENST00000452776 ZKSCAN5Q9Y2L8 839 aa10.47□□□□□ -0.73
SMCO1-202ENST00000452776 GOLGA2Q08379 1002 aa10.47□□□□□ -0.73
SMCO1-202ENST00000452776 C20orf194Q5TEA3 1177 aa10.47□□□□□ -0.73
SMCO1-202ENST00000452776 CLEC17AQ6ZS10 378 aa10.47□□□□□ -0.73
SMCO1-202ENST00000452776 MYRIPQ8NFW9 859 aa10.47□□□□□ -0.73
SMCO1-202ENST00000452776 DNAJC2Q99543 621 aaKnown RBP10.47□□□□□ -0.73
SMCO1-202ENST00000452776 TSPYL1Q9H0U9 437 aa10.47□□□□□ -0.73
SMCO1-202ENST00000452776 CHMP4BQ9H444 224 aaKnown RBP10.47□□□□□ -0.73
SMCO1-202ENST00000452776 ATP1B4Q9UN42 357 aaPredicted RBP10.47□□□□□ -0.73
SMCO1-202ENST00000452776 CARMIL1Q5VZK9 1371 aa10.46□□□□□ -0.73
SMCO1-202ENST00000452776 DENND4BO75064 1496 aaPredicted RBP10.46□□□□□ -0.74
SMCO1-202ENST00000452776 TCOF1Q13428 1488 aaKnown RBP10.46□□□□□ -0.74
SMCO1-202ENST00000452776 NLRP1Q9C000 1473 aa10.46□□□□□ -0.74
SMCO1-202ENST00000452776 GTF2F1P35269 517 aaKnown RBP eCLIP10.46□□□□□ -0.74
SMCO1-202ENST00000452776 ZNF445P59923 1031 aa10.46□□□□□ -0.74
SMCO1-202ENST00000452776 FAM193AP78312 1265 aa10.46□□□□□ -0.74
SMCO1-202ENST00000452776 HSP90AB1P08238 724 aaKnown RBP10.45□□□□□ -0.74
SMCO1-202ENST00000452776 KLHL40Q2TBA0 621 aa10.45□□□□□ -0.74
SMCO1-202ENST00000452776 DNTTIP2Q5QJE6 756 aaKnown RBP10.45□□□□□ -0.74
SMCO1-202ENST00000452776 SMC5Q8IY18 1101 aa10.45□□□□□ -0.74
SMCO1-202ENST00000452776 PDLIM2Q96JY6 352 aa10.45□□□□□ -0.74
SMCO1-202ENST00000452776 FEZ1Q99689 392 aa10.45□□□□□ -0.74
SMCO1-202ENST00000452776 POLR3GLQ9BT43 218 aa10.45□□□□□ -0.74
SMCO1-202ENST00000452776 CCDC66A2RUB6 948 aa10.44□□□□□ -0.74
SMCO1-202ENST00000452776 NBPF1Q3BBV0 1214 aa10.44□□□□□ -0.74
SMCO1-202ENST00000452776 TPRNQ4KMQ1 711 aa10.44□□□□□ -0.74
SMCO1-202ENST00000452776 DUSP27Q5VZP5 1158 aa10.44□□□□□ -0.74
SMCO1-202ENST00000452776 GAS2L3Q86XJ1 694 aa10.44□□□□□ -0.74
SMCO1-202ENST00000452776 PLSCR2Q9NRY7 297 aa10.44□□□□□ -0.74
SMCO1-202ENST00000452776 SEC24BO95487 1268 aa10.44□□□□□ -0.74
SMCO1-202ENST00000452776 DDIT3P35638 169 aa10.44□□□□□ -0.74
SMCO1-202ENST00000452776 C22orf23Q9BZE7 217 aa10.44□□□□□ -0.74
SMCO1-202ENST00000452776 ROCK1Q13464 1354 aa10.44□□□□□ -0.74
SMCO1-202ENST00000452776 CTTNBP2Q8WZ74 1663 aa10.43□□□□□ -0.74
SMCO1-202ENST00000452776 UHRF1BP1Q6BDS2 1440 aa10.43□□□□□ -0.74
SMCO1-202ENST00000452776 RAB3GAP1Q15042 981 aa10.43□□□□□ -0.74
SMCO1-202ENST00000452776 TEX2Q8IWB9 1127 aa10.43□□□□□ -0.74
SMCO1-202ENST00000452776 THOC2Q8NI27 1593 aaKnown RBP10.43□□□□□ -0.74
SMCO1-202ENST00000452776 NCOA3Q9Y6Q9 1424 aa10.43□□□□□ -0.74
SMCO1-202ENST00000452776 ATXN8OSP0DMR3 200 aa10.42□□□□□ -0.74
SMCO1-202ENST00000452776 EVX2Q03828 476 aa10.42□□□□□ -0.74
SMCO1-202ENST00000452776 PRDM10Q9NQV6 1147 aa10.42□□□□□ -0.74
SMCO1-202ENST00000452776 GABPB1Q06547 395 aaPredicted RBP10.42□□□□□ -0.74
SMCO1-202ENST00000452776 PDCL2Q8N4E4 241 aa10.42□□□□□ -0.74
SMCO1-202ENST00000452776 TNPO1Q92973 898 aaKnown RBP10.42□□□□□ -0.74
SMCO1-202ENST00000452776 CLUAP1Q96AJ1 413 aa10.42□□□□□ -0.74
SMCO1-202ENST00000452776 RWDD1Q9H446 243 aaPredicted RBP10.42□□□□□ -0.74
SMCO1-202ENST00000452776 ARHGAP31Q2M1Z3 1444 aa10.41□□□□□ -0.74
SMCO1-202ENST00000452776 KDM5CP41229 1560 aa10.41□□□□□ -0.74
SMCO1-202ENST00000452776 TRMT2AQ8IZ69 625 aaKnown RBP10.41□□□□□ -0.74
SMCO1-202ENST00000452776 ZNF692Q9BU19 519 aaPredicted RBP10.41□□□□□ -0.74
SMCO1-202ENST00000452776 RRP7BPQ9NSQ0 103 aa10.41□□□□□ -0.74
SMCO1-202ENST00000452776 ATF5Q9Y2D1 282 aaPredicted RBP10.41□□□□□ -0.74
SMCO1-202ENST00000452776 KIAA1107Q9UPP5 1409 aa10.41□□□□□ -0.74
SMCO1-202ENST00000452776 MBD5Q9P267 1494 aa10.41□□□□□ -0.74
SMCO1-202ENST00000452776 SUPT6HQ7KZ85 1726 aaKnown RBP10.41□□□□□ -0.74
SMCO1-202ENST00000452776 KIAA2012Q0VF49 1180 aa10.4□□□□□ -0.74
SMCO1-202ENST00000452776 CREBRFQ8IUR6 639 aa10.4□□□□□ -0.74
SMCO1-202ENST00000452776 GAPVD1Q14C86 1478 aa10.4□□□□□ -0.74
SMCO1-202ENST00000452776 KIF14Q15058 1648 aa10.4□□□□□ -0.74
SMCO1-202ENST00000452776 SLFN5Q08AF3 891 aa10.4□□□□□ -0.75
SMCO1-202ENST00000452776 BCORL1Q5H9F3 1711 aa10.39□□□□□ -0.75
SMCO1-202ENST00000452776 RALGAPBQ86X10 1494 aa10.39□□□□□ -0.75
SMCO1-202ENST00000452776 EHBP1L1Q8N3D4 1523 aa10.39□□□□□ -0.75
SMCO1-202ENST00000452776 IGHDP01880 384 aa10.39□□□□□ -0.75
SMCO1-202ENST00000452776 CHRM1P11229 460 aaPredicted RBP10.39□□□□□ -0.75
SMCO1-202ENST00000452776 KIF3AQ9Y496 699 aa10.39□□□□□ -0.75
SMCO1-202ENST00000452776 ATAD2BQ9ULI0 1458 aa10.39□□□□□ -0.75
SMCO1-202ENST00000452776 ZNF521Q96K83 1311 aa10.39□□□□□ -0.75
SMCO1-202ENST00000452776 CBX1P83916 185 aa10.38□□□□□ -0.75
SMCO1-202ENST00000452776 XPCQ01831 940 aaPredicted RBP10.38□□□□□ -0.75
SMCO1-202ENST00000452776 CARD11Q9BXL7 1154 aa10.38□□□□□ -0.75
SMCO1-202ENST00000452776 OGFRQ9NZT2 677 aa10.38□□□□□ -0.75
SMCO1-202ENST00000452776 DDX49Q9Y6V7 483 aaKnown RBP10.38□□□□□ -0.75
SMCO1-202ENST00000452776 CLASP1Q7Z460 1538 aa10.38□□□□□ -0.75
SMCO1-202ENST00000452776 CAMSAP2Q08AD1 1489 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms