RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 KIF12Q96FN5 646 aa6.43□□□□□ -1.38
EPHA3-202ENST00000452448 PDCL3Q9H2J4 239 aa6.43□□□□□ -1.38
EPHA3-202ENST00000452448 SMARCA5O60264 1052 aaPredicted RBP6.43□□□□□ -1.38
EPHA3-202ENST00000452448 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.43□□□□□ -1.38
EPHA3-202ENST00000452448 FBXO22Q8NEZ5 403 aa6.43□□□□□ -1.38
EPHA3-202ENST00000452448 TRIM44Q96DX7 344 aaPredicted RBP6.43□□□□□ -1.38
EPHA3-202ENST00000452448 NOP58Q9Y2X3 529 aaKnown RBP6.43□□□□□ -1.38
EPHA3-202ENST00000452448 NCKAP5LQ9HCH0 1330 aa6.42□□□□□ -1.38
EPHA3-202ENST00000452448 FLIIQ13045 1269 aa6.42□□□□□ -1.38
EPHA3-202ENST00000452448 RGL3Q3MIN7 710 aa6.42□□□□□ -1.38
EPHA3-202ENST00000452448 ZHX1Q9UKY1 873 aaPredicted RBP6.42□□□□□ -1.38
EPHA3-202ENST00000452448 UNCXA6NJT0 531 aa6.42□□□□□ -1.38
EPHA3-202ENST00000452448 ONECUT3O60422 494 aaPredicted RBP6.41□□□□□ -1.38
EPHA3-202ENST00000452448 TSHZ1Q6ZSZ6 1077 aa6.41□□□□□ -1.38
EPHA3-202ENST00000452448 ARMCX6Q7L4S7 300 aa6.41□□□□□ -1.38
EPHA3-202ENST00000452448 WASHC2AQ641Q2 1341 aa6.41□□□□□ -1.38
EPHA3-202ENST00000452448 A6NJR5 290 aa6.41□□□□□ -1.38
EPHA3-202ENST00000452448 PPP4R3BQ5MIZ7 849 aa6.41□□□□□ -1.38
EPHA3-202ENST00000452448 DPY19L2Q6NUT2 758 aa6.41□□□□□ -1.38
EPHA3-202ENST00000452448 NOL8Q76FK4 1167 aaKnown RBP6.41□□□□□ -1.38
EPHA3-202ENST00000452448 FAM117AQ9C073 453 aa6.41□□□□□ -1.38
EPHA3-202ENST00000452448 ARHGEF11O15085 1522 aa6.4□□□□□ -1.38
EPHA3-202ENST00000452448 DNTTIP2Q5QJE6 756 aaKnown RBP6.4□□□□□ -1.38
EPHA3-202ENST00000452448 CASC1Q6TDU7 716 aa6.4□□□□□ -1.38
EPHA3-202ENST00000452448 SMAP1Q8IYB5 467 aaPredicted RBP6.4□□□□□ -1.38
EPHA3-202ENST00000452448 PDAP1Q13442 181 aaKnown RBP6.4□□□□□ -1.39
EPHA3-202ENST00000452448 RALBP1Q15311 655 aa6.4□□□□□ -1.39
EPHA3-202ENST00000452448 CCDC96Q2M329 555 aa6.4□□□□□ -1.39
EPHA3-202ENST00000452448 ILDR1Q86SU0 546 aaPredicted RBP6.4□□□□□ -1.39
EPHA3-202ENST00000452448 TCERG1O14776 1098 aaKnown RBP6.39□□□□□ -1.39
EPHA3-202ENST00000452448 POLD1P28340 1107 aa6.39□□□□□ -1.39
EPHA3-202ENST00000452448 CCDC97Q96F63 343 aaPredicted RBP6.39□□□□□ -1.39
EPHA3-202ENST00000452448 HSP90AB3PQ58FF7 597 aa6.39□□□□□ -1.39
EPHA3-202ENST00000452448 DDRGK1Q96HY6 314 aa6.39□□□□□ -1.39
EPHA3-202ENST00000452448 ZRANB1Q9UGI0 708 aa6.39□□□□□ -1.39
EPHA3-202ENST00000452448 NESP48681 1621 aa6.39□□□□□ -1.39
EPHA3-202ENST00000452448 ARID4AP29374 1257 aaPredicted RBP6.38□□□□□ -1.39
EPHA3-202ENST00000452448 NBPF9Q3BBW0 867 aa6.38□□□□□ -1.39
EPHA3-202ENST00000452448 OTUD6BQ8N6M0 293 aa6.38□□□□□ -1.39
EPHA3-202ENST00000452448 MS4A3Q96HJ5 214 aa6.38□□□□□ -1.39
EPHA3-202ENST00000452448 ZNF500O60304 480 aaPredicted RBP6.37□□□□□ -1.39
EPHA3-202ENST00000452448 CD44P16070 742 aaKnown RBP6.37□□□□□ -1.39
EPHA3-202ENST00000452448 AK7Q96M32 723 aa6.37□□□□□ -1.39
EPHA3-202ENST00000452448 TESPA1A2RU30 521 aaPredicted RBP6.37□□□□□ -1.39
EPHA3-202ENST00000452448 UTP14CQ5TAP6 766 aaKnown RBP6.37□□□□□ -1.39
EPHA3-202ENST00000452448 POTEHQ6S545 545 aa6.37□□□□□ -1.39
EPHA3-202ENST00000452448 TERF2IPQ9NYB0 399 aa6.37□□□□□ -1.39
EPHA3-202ENST00000452448 ZNF513Q8N8E2 541 aaPredicted RBP6.36□□□□□ -1.39
EPHA3-202ENST00000452448 APBB1IPQ7Z5R6 666 aaPredicted RBP6.36□□□□□ -1.39
EPHA3-202ENST00000452448 NME8Q8N427 588 aa6.36□□□□□ -1.39
EPHA3-202ENST00000452448 AMOTL2Q9Y2J4 779 aa6.36□□□□□ -1.39
EPHA3-202ENST00000452448 GALR2O43603 387 aaPredicted RBP6.35□□□□□ -1.39
EPHA3-202ENST00000452448 DNAJC14Q6Y2X3 702 aaPredicted RBP6.35□□□□□ -1.39
EPHA3-202ENST00000452448 ZNF467Q7Z7K2 595 aaPredicted RBP6.35□□□□□ -1.39
EPHA3-202ENST00000452448 SGIP1Q9BQI5 828 aa6.35□□□□□ -1.39
EPHA3-202ENST00000452448 IGSF5Q9NSI5 407 aa6.35□□□□□ -1.39
EPHA3-202ENST00000452448 SERPINA10Q9UK55 444 aa6.35□□□□□ -1.39
EPHA3-202ENST00000452448 BAZ1BQ9UIG0 1483 aaKnown RBP6.35□□□□□ -1.39
EPHA3-202ENST00000452448 MYBPC2Q14324 1141 aa6.35□□□□□ -1.39
EPHA3-202ENST00000452448 KIF21AQ7Z4S6 1674 aa6.35□□□□□ -1.39
EPHA3-202ENST00000452448 PDE4DQ08499 809 aa6.34□□□□□ -1.39
EPHA3-202ENST00000452448 FOXD4Q12950 439 aaPredicted RBP6.34□□□□□ -1.39
EPHA3-202ENST00000452448 CHMP4CQ96CF2 233 aa6.34□□□□□ -1.39
EPHA3-202ENST00000452448 PEG3Q9GZU2 1588 aa6.34□□□□□ -1.39
EPHA3-202ENST00000452448 PLEKHG3A1L390 1219 aa6.34□□□□□ -1.39
EPHA3-202ENST00000452448 GOLIM4O00461 696 aa6.34□□□□□ -1.39
EPHA3-202ENST00000452448 MARCH6O60337 910 aa6.34□□□□□ -1.39
EPHA3-202ENST00000452448 TAF3Q5VWG9 929 aa6.34□□□□□ -1.39
EPHA3-202ENST00000452448 MYH16Q9H6N6 1097 aa6.34□□□□□ -1.39
EPHA3-202ENST00000452448 ARIH1Q9Y4X5 557 aaPredicted RBP6.34□□□□□ -1.39
EPHA3-202ENST00000452448 TNNT2P45379 298 aaPredicted RBP6.33□□□□□ -1.4
EPHA3-202ENST00000452448 RBM26Q5T8P6 1007 aaKnown RBP6.33□□□□□ -1.4
EPHA3-202ENST00000452448 EVI5LQ96CN4 794 aa6.33□□□□□ -1.4
EPHA3-202ENST00000452448 MROH2BQ7Z745 1585 aa6.33□□□□□ -1.4
EPHA3-202ENST00000452448 CCER2I3L3R5 266 aa6.33□□□□□ -1.4
EPHA3-202ENST00000452448 TPD52L2O43399 206 aaKnown RBP6.33□□□□□ -1.4
EPHA3-202ENST00000452448 MAP2K1Q02750 393 aaPredicted RBP6.33□□□□□ -1.4
EPHA3-202ENST00000452448 BANK1Q8NDB2 785 aa6.33□□□□□ -1.4
EPHA3-202ENST00000452448 SPATA32Q96LK8 384 aa6.33□□□□□ -1.4
EPHA3-202ENST00000452448 LARP6Q9BRS8 491 aaKnown RBP6.33□□□□□ -1.4
EPHA3-202ENST00000452448 GEMIN8Q9NWZ8 242 aaKnown RBP6.33□□□□□ -1.4
EPHA3-202ENST00000452448 STK26Q9P289 416 aa6.33□□□□□ -1.4
EPHA3-202ENST00000452448 PAK3O75914 559 aaPredicted RBP6.32□□□□□ -1.4
EPHA3-202ENST00000452448 POM121Q96HA1 1249 aa6.32□□□□□ -1.4
EPHA3-202ENST00000452448 TMEM106CQ9BVX2 250 aa6.32□□□□□ -1.4
EPHA3-202ENST00000452448 YY1AP1Q9H869 796 aa6.32□□□□□ -1.4
EPHA3-202ENST00000452448 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.32□□□□□ -1.4
EPHA3-202ENST00000452448 MLLT3P42568 568 aaPredicted RBP6.32□□□□□ -1.4
EPHA3-202ENST00000452448 NBPF6Q5VWK0 638 aa6.32□□□□□ -1.4
EPHA3-202ENST00000452448 EP400NLQ6ZTU2 488 aa6.32□□□□□ -1.4
EPHA3-202ENST00000452448 PROSER2Q86WR7 435 aaPredicted RBP6.32□□□□□ -1.4
EPHA3-202ENST00000452448 NBPF5PQ86XG9 351 aaPredicted RBP6.32□□□□□ -1.4
EPHA3-202ENST00000452448 ZNF579Q8NAF0 562 aaKnown RBP6.32□□□□□ -1.4
EPHA3-202ENST00000452448 NBPF4Q96M43 638 aa6.32□□□□□ -1.4
EPHA3-202ENST00000452448 PNNQ9H307 717 aaKnown RBP6.32□□□□□ -1.4
EPHA3-202ENST00000452448 RPS6KL1Q9Y6S9 549 aa6.32□□□□□ -1.4
EPHA3-202ENST00000452448 TRIM66O15016 1216 aa6.31□□□□□ -1.4
EPHA3-202ENST00000452448 ANP32AP39687 249 aaKnown RBP6.31□□□□□ -1.4
EPHA3-202ENST00000452448 DMTNQ08495 405 aa6.31□□□□□ -1.4
EPHA3-202ENST00000452448 NBPF10Q6P3W6 841 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms