RNA–Protein interactions for RNA: ENST00000450650.5

CAPN13-202, Transcript of calpain 13, humanhuman

TSL 2

Gene CAPN13, Length 2,328 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-202ENST00000450650 HMGB1P09429 215 aaKnown RBP12.72□□□□□ -0.37
CAPN13-202ENST00000450650 INO80Q9ULG1 1556 aaPredicted RBP12.71□□□□□ -0.37
CAPN13-202ENST00000450650 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.71□□□□□ -0.38
CAPN13-202ENST00000450650 ATP7AQ04656 1500 aa12.7□□□□□ -0.38
CAPN13-202ENST00000450650 CFAP74Q9C0B2 1584 aa12.7□□□□□ -0.38
CAPN13-202ENST00000450650 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.7□□□□□ -0.38
CAPN13-202ENST00000450650 RBM25P49756 843 aaKnown RBP12.7□□□□□ -0.38
CAPN13-202ENST00000450650 PUS7Q96PZ0 661 aaKnown RBP12.69□□□□□ -0.38
CAPN13-202ENST00000450650 NBPF8Q3BBV2 869 aa12.68□□□□□ -0.38
CAPN13-202ENST00000450650 SLC24A3Q9HC58 644 aa12.68□□□□□ -0.38
CAPN13-202ENST00000450650 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
CAPN13-202ENST00000450650 EIF4G2P78344 907 aaKnown RBP eCLIP12.68□□□□□ -0.38
CAPN13-202ENST00000450650 DDX10Q13206 875 aaKnown RBP12.68□□□□□ -0.38
CAPN13-202ENST00000450650 RGS22Q8NE09 1264 aa12.67□□□□□ -0.38
CAPN13-202ENST00000450650 HSPA5P11021 654 aaKnown RBP12.67□□□□□ -0.38
CAPN13-202ENST00000450650 ZNF518AQ6AHZ1 1483 aa12.67□□□□□ -0.38
CAPN13-202ENST00000450650 GLI2P10070 1586 aa12.67□□□□□ -0.38
CAPN13-202ENST00000450650 FAM69CQ0P6D2 419 aa12.66□□□□□ -0.38
CAPN13-202ENST00000450650 CCDC144AA2RUR9 1427 aa12.66□□□□□ -0.38
CAPN13-202ENST00000450650 BRD2P25440 801 aaKnown RBP12.65□□□□□ -0.39
CAPN13-202ENST00000450650 DEPDC5O75140 1603 aa12.65□□□□□ -0.39
CAPN13-202ENST00000450650 UHRF1BP1Q6BDS2 1440 aa12.64□□□□□ -0.39
CAPN13-202ENST00000450650 MAP3K4Q9Y6R4 1608 aa12.64□□□□□ -0.39
CAPN13-202ENST00000450650 POLR3GLQ9BT43 218 aa12.64□□□□□ -0.39
CAPN13-202ENST00000450650 PLA2R1Q13018 1463 aa12.64□□□□□ -0.39
CAPN13-202ENST00000450650 POGZQ7Z3K3 1410 aa12.63□□□□□ -0.39
CAPN13-202ENST00000450650 DIP2BQ9P265 1576 aa12.63□□□□□ -0.39
CAPN13-202ENST00000450650 ATP10AO60312 1499 aa12.63□□□□□ -0.39
CAPN13-202ENST00000450650 EIF2AK4Q9P2K8 1649 aaKnown RBP12.63□□□□□ -0.39
CAPN13-202ENST00000450650 DHX29Q7Z478 1369 aaKnown RBP12.63□□□□□ -0.39
CAPN13-202ENST00000450650 KIDINS220Q9ULH0 1771 aa12.63□□□□□ -0.39
CAPN13-202ENST00000450650 NEO1Q92859 1461 aa12.63□□□□□ -0.39
CAPN13-202ENST00000450650 KDM5CP41229 1560 aa12.63□□□□□ -0.39
CAPN13-202ENST00000450650 ZNF326Q5BKZ1 582 aaKnown RBP12.61□□□□□ -0.39
CAPN13-202ENST00000450650 SPATA31E1Q6ZUB1 1445 aa12.61□□□□□ -0.39
CAPN13-202ENST00000450650 KANK1Q14678 1352 aa12.61□□□□□ -0.39
CAPN13-202ENST00000450650 RALGAPBQ86X10 1494 aa12.6□□□□□ -0.39
CAPN13-202ENST00000450650 VWDEQ8N2E2 1590 aa12.6□□□□□ -0.39
CAPN13-202ENST00000450650 WASHC2AQ641Q2 1341 aa12.6□□□□□ -0.39
CAPN13-202ENST00000450650 MLH3Q9UHC1 1453 aa12.6□□□□□ -0.39
CAPN13-202ENST00000450650 PRDM15P57071 1507 aaPredicted RBP12.59□□□□□ -0.39
CAPN13-202ENST00000450650 KIF3BO15066 747 aa12.59□□□□□ -0.39
CAPN13-202ENST00000450650 AEBP1Q8IUX7 1158 aa12.59□□□□□ -0.39
CAPN13-202ENST00000450650 DCAF11Q8TEB1 546 aa12.59□□□□□ -0.39
CAPN13-202ENST00000450650 HECW2Q9P2P5 1572 aa12.59□□□□□ -0.39
CAPN13-202ENST00000450650 E9PCH4 1651 aa12.59□□□□□ -0.39
CAPN13-202ENST00000450650 TET3O43151 1660 aa12.59□□□□□ -0.39
CAPN13-202ENST00000450650 A2MP01023 1474 aa12.58□□□□□ -0.4
CAPN13-202ENST00000450650 ANP32CO43423 234 aa12.57□□□□□ -0.4
CAPN13-202ENST00000450650 MROH1Q8NDA8 1641 aa12.57□□□□□ -0.4
CAPN13-202ENST00000450650 USP47Q96K76 1375 aa12.57□□□□□ -0.4
CAPN13-202ENST00000450650 TRPM2O94759 1503 aa12.56□□□□□ -0.4
CAPN13-202ENST00000450650 TSPOAP1O95153 1857 aa12.56□□□□□ -0.4
CAPN13-202ENST00000450650 PROM2Q8N271 834 aa12.55□□□□□ -0.4
CAPN13-202ENST00000450650 PTPRTO14522 1441 aa12.55□□□□□ -0.4
CAPN13-202ENST00000450650 CCDC7Q96M83 1385 aa12.55□□□□□ -0.4
CAPN13-202ENST00000450650 SPHKAPQ2M3C7 1700 aa12.55□□□□□ -0.4
CAPN13-202ENST00000450650 RGL3Q3MIN7 710 aa12.55□□□□□ -0.4
CAPN13-202ENST00000450650 RNF17Q9BXT8 1623 aaKnown RBP12.55□□□□□ -0.4
CAPN13-202ENST00000450650 PRAG1Q86YV5 1406 aa12.55□□□□□ -0.4
CAPN13-202ENST00000450650 POLR1AO95602 1720 aaPredicted RBP12.55□□□□□ -0.4
CAPN13-202ENST00000450650 KIF13AQ9H1H9 1805 aa12.54□□□□□ -0.4
CAPN13-202ENST00000450650 CCER2I3L3R5 266 aa12.54□□□□□ -0.4
CAPN13-202ENST00000450650 RAPGEF3O95398 923 aa12.54□□□□□ -0.4
CAPN13-202ENST00000450650 FRMPD1Q5SYB0 1578 aa12.54□□□□□ -0.4
CAPN13-202ENST00000450650 C11orf95C9JLR9 678 aaPredicted RBP12.54□□□□□ -0.4
CAPN13-202ENST00000450650 CCDC82Q8N4S0 544 aa12.54□□□□□ -0.4
CAPN13-202ENST00000450650 CARD11Q9BXL7 1154 aa12.54□□□□□ -0.4
CAPN13-202ENST00000450650 ABCA6Q8N139 1617 aa12.53□□□□□ -0.4
CAPN13-202ENST00000450650 ZC3H15Q8WU90 426 aaKnown RBP12.53□□□□□ -0.4
CAPN13-202ENST00000450650 RICTORQ6R327 1708 aa12.52□□□□□ -0.4
CAPN13-202ENST00000450650 PPRC1Q5VV67 1664 aaKnown RBP12.52□□□□□ -0.4
CAPN13-202ENST00000450650 LMTK2Q8IWU2 1503 aa12.52□□□□□ -0.4
CAPN13-202ENST00000450650 NKX1-1Q15270 411 aaPredicted RBP12.52□□□□□ -0.41
CAPN13-202ENST00000450650 ROCK2O75116 1388 aaKnown RBP12.52□□□□□ -0.41
CAPN13-202ENST00000450650 CNTLNQ9NXG0 1405 aa12.52□□□□□ -0.41
CAPN13-202ENST00000450650 EFCAB6Q5THR3 1501 aa12.52□□□□□ -0.41
CAPN13-202ENST00000450650 TRPM1Q7Z4N2 1603 aa12.52□□□□□ -0.41
CAPN13-202ENST00000450650 BCORL1Q5H9F3 1711 aa12.52□□□□□ -0.41
CAPN13-202ENST00000450650 SPOCK2Q92563 424 aa12.51□□□□□ -0.41
CAPN13-202ENST00000450650 CEP152O94986 1710 aa12.51□□□□□ -0.41
CAPN13-202ENST00000450650 KIF7Q2M1P5 1343 aa12.51□□□□□ -0.41
CAPN13-202ENST00000450650 GPBP1L1Q9HC44 474 aaPredicted RBP12.51□□□□□ -0.41
CAPN13-202ENST00000450650 USP35Q9P2H5 1018 aa12.51□□□□□ -0.41
CAPN13-202ENST00000450650 CLTCL1P53675 1640 aa12.5□□□□□ -0.41
CAPN13-202ENST00000450650 RNF216Q9NWF9 866 aaPredicted RBP12.49□□□□□ -0.41
CAPN13-202ENST00000450650 DIP2CQ9Y2E4 1556 aa12.49□□□□□ -0.41
CAPN13-202ENST00000450650 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
CAPN13-202ENST00000450650 ARID4BQ4LE39 1312 aaPredicted RBP12.48□□□□□ -0.41
CAPN13-202ENST00000450650 GPRASP1Q5JY77 1395 aa12.48□□□□□ -0.41
CAPN13-202ENST00000450650 NEURL4Q96JN8 1562 aa12.47□□□□□ -0.41
CAPN13-202ENST00000450650 LAMC1P11047 1609 aa12.47□□□□□ -0.41
CAPN13-202ENST00000450650 GGT6Q6P531 493 aa12.46□□□□□ -0.41
CAPN13-202ENST00000450650 STAC3Q96MF2 364 aa12.46□□□□□ -0.41
CAPN13-202ENST00000450650 ZMYM4Q5VZL5 1548 aa12.45□□□□□ -0.42
CAPN13-202ENST00000450650 ST20-MTHFSA0A0A6YYL1 179 aa12.45□□□□□ -0.42
CAPN13-202ENST00000450650 NBPF1Q3BBV0 1214 aa12.45□□□□□ -0.42
CAPN13-202ENST00000450650 YEATS2Q9ULM3 1422 aa12.45□□□□□ -0.42
CAPN13-202ENST00000450650 ABCC3O15438 1527 aa12.45□□□□□ -0.42
CAPN13-202ENST00000450650 MADDQ8WXG6 1647 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms