RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	WAPL	Q7Z5K2	1190 aa		11.25	□□□□□ -0.61
HCG18-238	ENST00000449544	LAS1L	Q9Y4W2	734 aa	Known RBP	11.25	□□□□□ -0.61
HCG18-238	ENST00000449544	CLASP1	Q7Z460	1538 aa		11.25	□□□□□ -0.61
HCG18-238	ENST00000449544	NEFL	P07196	543 aa		11.24	□□□□□ -0.61
HCG18-238	ENST00000449544	CC2D1B	Q5T0F9	858 aa	Known RBP	11.24	□□□□□ -0.61
HCG18-238	ENST00000449544	ERBIN	Q96RT1	1412 aa		11.24	□□□□□ -0.61
HCG18-238	ENST00000449544	NEUROD2	Q15784	382 aa		11.23	□□□□□ -0.61
HCG18-238	ENST00000449544	CABP2	Q9NPB3	220 aa		11.23	□□□□□ -0.61
HCG18-238	ENST00000449544	DAPK1	P53355	1430 aa		11.23	□□□□□ -0.61
HCG18-238	ENST00000449544	RRBP1	Q9P2E9	1410 aa	Known RBP	11.23	□□□□□ -0.61
HCG18-238	ENST00000449544	DDX10	Q13206	875 aa	Known RBP	11.23	□□□□□ -0.61
HCG18-238	ENST00000449544	C1orf141	Q5JVX7	400 aa		11.22	□□□□□ -0.61
HCG18-238	ENST00000449544	MAGI2	Q86UL8	1455 aa		11.22	□□□□□ -0.61
HCG18-238	ENST00000449544	SYCP2	Q9BX26	1530 aa		11.22	□□□□□ -0.61
HCG18-238	ENST00000449544	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.21	□□□□□ -0.61
HCG18-238	ENST00000449544	ANKRD30B	Q9BXX2	1392 aa		11.21	□□□□□ -0.61
HCG18-238	ENST00000449544	DDX54	Q8TDD1	881 aa	Known RBP	11.21	□□□□□ -0.61
HCG18-238	ENST00000449544	TBX22	Q9Y458	520 aa		11.21	□□□□□ -0.61
HCG18-238	ENST00000449544	PNN	Q9H307	717 aa	Known RBP	11.21	□□□□□ -0.62
HCG18-238	ENST00000449544	PCF11	O94913	1555 aa	Known RBP	11.21	□□□□□ -0.62
HCG18-238	ENST00000449544	ZNF772	Q68DY9	489 aa	Predicted RBP	11.2	□□□□□ -0.62
HCG18-238	ENST00000449544	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.2	□□□□□ -0.62
HCG18-238	ENST00000449544	MAGI3	Q5TCQ9	1506 aa		11.2	□□□□□ -0.62
HCG18-238	ENST00000449544	NBPF8	Q3BBV2	869 aa		11.19	□□□□□ -0.62
HCG18-238	ENST00000449544	NBPF14	Q5TI25	921 aa		11.19	□□□□□ -0.62
HCG18-238	ENST00000449544	HMGB2	P26583	209 aa	Known RBP	11.19	□□□□□ -0.62
HCG18-238	ENST00000449544	CDK19	Q9BWU1	502 aa		11.19	□□□□□ -0.62
HCG18-238	ENST00000449544	RXRB	P28702	533 aa		11.19	□□□□□ -0.62
HCG18-238	ENST00000449544	ILDR1	Q86SU0	546 aa	Predicted RBP	11.18	□□□□□ -0.62
HCG18-238	ENST00000449544	CCDC61	Q9Y6R9	512 aa		11.18	□□□□□ -0.62
HCG18-238	ENST00000449544	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.18	□□□□□ -0.62
HCG18-238	ENST00000449544	HFM1	A2PYH4	1435 aa		11.18	□□□□□ -0.62
HCG18-238	ENST00000449544	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.18	□□□□□ -0.62
HCG18-238	ENST00000449544		G3V3G9	751 aa		11.18	□□□□□ -0.62
HCG18-238	ENST00000449544	DCAF8	Q5TAQ9	597 aa		11.18	□□□□□ -0.62
HCG18-238	ENST00000449544	RIMS2	Q9UQ26	1411 aa		11.17	□□□□□ -0.62
HCG18-238	ENST00000449544	USP21	Q9UK80	565 aa		11.17	□□□□□ -0.62
HCG18-238	ENST00000449544	NUDT16	Q96DE0	195 aa	Known RBP	11.16	□□□□□ -0.62
HCG18-238	ENST00000449544	ZNF692	Q9BU19	519 aa	Predicted RBP	11.16	□□□□□ -0.62
HCG18-238	ENST00000449544	CTTNBP2	Q8WZ74	1663 aa		11.16	□□□□□ -0.62
HCG18-238	ENST00000449544	TTC5	Q8N0Z6	440 aa		11.15	□□□□□ -0.62
HCG18-238	ENST00000449544	ABCC5	O15440	1437 aa		11.15	□□□□□ -0.62
HCG18-238	ENST00000449544	TEF	Q10587	303 aa		11.15	□□□□□ -0.62
HCG18-238	ENST00000449544	MAPKBP1	O60336	1514 aa		11.15	□□□□□ -0.62
HCG18-238	ENST00000449544	ST20-MTHFS	A0A0A6YYL1	179 aa		11.15	□□□□□ -0.62
HCG18-238	ENST00000449544	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.15	□□□□□ -0.62
HCG18-238	ENST00000449544	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
HCG18-238	ENST00000449544	QTRT2	Q9H974	415 aa	Known RBP	11.15	□□□□□ -0.62
HCG18-238	ENST00000449544	CABP1	Q9NZU7	370 aa		11.15	□□□□□ -0.62
HCG18-238	ENST00000449544	BAG6	P46379	1132 aa		11.15	□□□□□ -0.63
HCG18-238	ENST00000449544	TMEM94	Q12767	1356 aa		11.15	□□□□□ -0.63
HCG18-238	ENST00000449544	FAM9B	Q8IZU0	186 aa		11.14	□□□□□ -0.63
HCG18-238	ENST00000449544	TIAM1	Q13009	1591 aa		11.14	□□□□□ -0.63
HCG18-238	ENST00000449544	TAT	P17735	454 aa	Predicted RBP	11.14	□□□□□ -0.63
HCG18-238	ENST00000449544	EXOC5	O00471	708 aa		11.13	□□□□□ -0.63
HCG18-238	ENST00000449544	LTK	P29376	864 aa		11.13	□□□□□ -0.63
HCG18-238	ENST00000449544	HSPA1L	P34931	641 aa		11.13	□□□□□ -0.63
HCG18-238	ENST00000449544	CHRNA2	Q15822	529 aa		11.13	□□□□□ -0.63
HCG18-238	ENST00000449544	CLSPN	Q9HAW4	1339 aa		11.13	□□□□□ -0.63
HCG18-238	ENST00000449544	NPHP4	O75161	1426 aa	Predicted RBP	11.13	□□□□□ -0.63
HCG18-238	ENST00000449544	KCNH5	Q8NCM2	988 aa		11.13	□□□□□ -0.63
HCG18-238	ENST00000449544	NCOA1	Q15788	1441 aa		11.13	□□□□□ -0.63
HCG18-238	ENST00000449544	HRC	P23327	699 aa		11.12	□□□□□ -0.63
HCG18-238	ENST00000449544	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.12	□□□□□ -0.63
HCG18-238	ENST00000449544	CABLES1	Q8TDN4	633 aa		11.12	□□□□□ -0.63
HCG18-238	ENST00000449544	CGNL1	Q0VF96	1302 aa		11.12	□□□□□ -0.63
HCG18-238	ENST00000449544	TIMELESS	Q9UNS1	1208 aa		11.12	□□□□□ -0.63
HCG18-238	ENST00000449544	CFAP74	Q9C0B2	1584 aa		11.11	□□□□□ -0.63
HCG18-238	ENST00000449544	RBM42	Q9BTD8	480 aa	Known RBP	11.11	□□□□□ -0.63
HCG18-238	ENST00000449544	PTPRM	P28827	1452 aa		11.11	□□□□□ -0.63
HCG18-238	ENST00000449544	GOLGA2	Q08379	1002 aa		11.11	□□□□□ -0.63
HCG18-238	ENST00000449544	MRS2	Q9HD23	443 aa		11.11	□□□□□ -0.63
HCG18-238	ENST00000449544	ABCA8	O94911	1581 aa		11.1	□□□□□ -0.63
HCG18-238	ENST00000449544	TRPC5	Q9UL62	973 aa	Predicted RBP	11.1	□□□□□ -0.63
HCG18-238	ENST00000449544	ATP7A	Q04656	1500 aa		11.1	□□□□□ -0.63
HCG18-238	ENST00000449544	GGNBP2	Q9H3C7	697 aa		11.1	□□□□□ -0.63
HCG18-238	ENST00000449544	TMEM2	Q9UHN6	1383 aa		11.1	□□□□□ -0.63
HCG18-238	ENST00000449544	ZRANB1	Q9UGI0	708 aa		11.09	□□□□□ -0.63
HCG18-238	ENST00000449544	ADCY10	Q96PN6	1610 aa		11.09	□□□□□ -0.63
HCG18-238	ENST00000449544	ORAI2	Q96SN7	254 aa		11.08	□□□□□ -0.64
HCG18-238	ENST00000449544	WASL	O00401	505 aa	Predicted RBP	11.08	□□□□□ -0.64
HCG18-238	ENST00000449544	ROCK1	Q13464	1354 aa		11.08	□□□□□ -0.64
HCG18-238	ENST00000449544	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
HCG18-238	ENST00000449544	ADGRF5	Q8IZF2	1346 aa		11.08	□□□□□ -0.64
HCG18-238	ENST00000449544	DUOX2	Q9NRD8	1548 aa		11.08	□□□□□ -0.64
HCG18-238	ENST00000449544	WASHC2A	Q641Q2	1341 aa		11.08	□□□□□ -0.64
HCG18-238	ENST00000449544	PTPRK	Q15262	1439 aa		11.07	□□□□□ -0.64
HCG18-238	ENST00000449544	HSPA5	P11021	654 aa	Known RBP	11.06	□□□□□ -0.64
HCG18-238	ENST00000449544	CHMP4A	Q9BY43	222 aa		11.06	□□□□□ -0.64
HCG18-238	ENST00000449544	DDX17	Q92841	729 aa	Known RBP	11.06	□□□□□ -0.64
HCG18-238	ENST00000449544	BTG4	Q9NY30	223 aa		11.06	□□□□□ -0.64
HCG18-238	ENST00000449544	DDB1	Q16531	1140 aa		11.06	□□□□□ -0.64
HCG18-238	ENST00000449544	MLH3	Q9UHC1	1453 aa		11.06	□□□□□ -0.64
HCG18-238	ENST00000449544	NOS1	P29475	1434 aa		11.05	□□□□□ -0.64
HCG18-238	ENST00000449544	SMG6	Q86US8	1419 aa	Known RBP	11.05	□□□□□ -0.64
HCG18-238	ENST00000449544	NBPF1	Q3BBV0	1214 aa		11.05	□□□□□ -0.64
HCG18-238	ENST00000449544	CENPB	P07199	599 aa	Predicted RBP	11.05	□□□□□ -0.64
HCG18-238	ENST00000449544	NGEF	Q8N5V2	710 aa		11.04	□□□□□ -0.64
HCG18-238	ENST00000449544	FAM98C	Q17RN3	349 aa	Known RBP	11.04	□□□□□ -0.64
HCG18-238	ENST00000449544	POLD1	P28340	1107 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 74 ms