RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 TRPM2O94759 1503 aa15.36■□□□□ 0.05
RFX3-208ENST00000449234 ATF5Q9Y2D1 282 aaPredicted RBP15.35■□□□□ 0.05
RFX3-208ENST00000449234 DEPDC5O75140 1603 aa15.35■□□□□ 0.05
RFX3-208ENST00000449234 NPC1L1Q9UHC9 1359 aa15.34■□□□□ 0.05
RFX3-208ENST00000449234 VWDEQ8N2E2 1590 aa15.33■□□□□ 0.05
RFX3-208ENST00000449234 KIAA1210Q9ULL0 1709 aa15.33■□□□□ 0.04
RFX3-208ENST00000449234 TET3O43151 1660 aa15.32■□□□□ 0.04
RFX3-208ENST00000449234 ABCB7O75027 752 aa15.31■□□□□ 0.04
RFX3-208ENST00000449234 B4GALNT3Q6L9W6 998 aa15.31■□□□□ 0.04
RFX3-208ENST00000449234 CCDC136Q96JN2 1154 aa15.31■□□□□ 0.04
RFX3-208ENST00000449234 PANK3Q9H999 370 aa15.31■□□□□ 0.04
RFX3-208ENST00000449234 MYT1LQ9UL68 1186 aa15.31■□□□□ 0.04
RFX3-208ENST00000449234 SCAF11Q99590 1463 aaKnown RBP15.31■□□□□ 0.04
RFX3-208ENST00000449234 ZFYVE16Q7Z3T8 1539 aa15.31■□□□□ 0.04
RFX3-208ENST00000449234 CEP152O94986 1710 aa15.3■□□□□ 0.04
RFX3-208ENST00000449234 BLMP54132 1417 aaPredicted RBP15.3■□□□□ 0.04
RFX3-208ENST00000449234 ABCA9Q8IUA7 1624 aa15.3■□□□□ 0.04
RFX3-208ENST00000449234 DISP3Q9P2K9 1392 aa15.3■□□□□ 0.04
RFX3-208ENST00000449234 IQGAP1P46940 1657 aa15.29■□□□□ 0.04
RFX3-208ENST00000449234 MADDQ8WXG6 1647 aa15.29■□□□□ 0.04
RFX3-208ENST00000449234 EIF3AQ14152 1382 aaKnown RBP15.29■□□□□ 0.04
RFX3-208ENST00000449234 SPHKAPQ2M3C7 1700 aa15.29■□□□□ 0.04
RFX3-208ENST00000449234 RRP1P56182 461 aaKnown RBP15.28■□□□□ 0.04
RFX3-208ENST00000449234 NGEFQ8N5V2 710 aa15.28■□□□□ 0.04
RFX3-208ENST00000449234 RCAN3Q9UKA8 241 aa15.28■□□□□ 0.04
RFX3-208ENST00000449234 INO80Q9ULG1 1556 aaPredicted RBP15.28■□□□□ 0.04
RFX3-208ENST00000449234 ATP7AQ04656 1500 aa15.27■□□□□ 0.03
RFX3-208ENST00000449234 KNSTRNQ9Y448 316 aa15.26■□□□□ 0.03
RFX3-208ENST00000449234 FANCAO15360 1455 aa15.26■□□□□ 0.03
RFX3-208ENST00000449234 AFAP1Q8N556 730 aa15.25■□□□□ 0.03
RFX3-208ENST00000449234 LMTK2Q8IWU2 1503 aa15.25■□□□□ 0.03
RFX3-208ENST00000449234 MYOM2P54296 1465 aa15.25■□□□□ 0.03
RFX3-208ENST00000449234 SYNMO15061 1565 aa15.24■□□□□ 0.03
RFX3-208ENST00000449234 POLA2Q14181 598 aa15.23■□□□□ 0.03
RFX3-208ENST00000449234 TCERG1O14776 1098 aaKnown RBP15.22■□□□□ 0.03
RFX3-208ENST00000449234 ERICH6Q7L0X2 663 aa15.22■□□□□ 0.03
RFX3-208ENST00000449234 PIK3C2GO75747 1445 aa15.22■□□□□ 0.03
RFX3-208ENST00000449234 CLTCL1P53675 1640 aa15.21■□□□□ 0.03
RFX3-208ENST00000449234 MS4A1P11836 297 aa15.21■□□□□ 0.03
RFX3-208ENST00000449234 SBNO2Q9Y2G9 1366 aa15.21■□□□□ 0.02
RFX3-208ENST00000449234 CNGB1Q14028 1251 aaPredicted RBP15.2■□□□□ 0.02
RFX3-208ENST00000449234 AMER1Q5JTC6 1135 aaPredicted RBP15.2■□□□□ 0.02
RFX3-208ENST00000449234 ASXL1Q8IXJ9 1541 aa15.2■□□□□ 0.02
RFX3-208ENST00000449234 ADGRL1O94910 1474 aa15.2■□□□□ 0.02
RFX3-208ENST00000449234 PPP2R1AP30153 589 aa15.19■□□□□ 0.02
RFX3-208ENST00000449234 CC2D1BQ5T0F9 858 aaKnown RBP15.19■□□□□ 0.02
RFX3-208ENST00000449234 RPGRIP1LQ68CZ1 1315 aa15.18■□□□□ 0.02
RFX3-208ENST00000449234 KIF3BO15066 747 aa15.18■□□□□ 0.02
RFX3-208ENST00000449234 PUS7Q96PZ0 661 aaKnown RBP15.18■□□□□ 0.02
RFX3-208ENST00000449234 CFAP74Q9C0B2 1584 aa15.17■□□□□ 0.02
RFX3-208ENST00000449234 NRXN1Q9ULB1 1477 aa15.17■□□□□ 0.02
RFX3-208ENST00000449234 MAP3K4Q9Y6R4 1608 aa15.17■□□□□ 0.02
RFX3-208ENST00000449234 ZNF518AQ6AHZ1 1483 aa15.16■□□□□ 0.02
RFX3-208ENST00000449234 NPM1P06748 294 aaKnown RBP eCLIP15.16■□□□□ 0.02
RFX3-208ENST00000449234 WDR43Q15061 677 aaKnown RBP eCLIP15.16■□□□□ 0.02
RFX3-208ENST00000449234 ASXL2Q76L83 1435 aa15.16■□□□□ 0.02
RFX3-208ENST00000449234 KIF1BO60333 1816 aa15.15■□□□□ 0.02
RFX3-208ENST00000449234 MROH1Q8NDA8 1641 aa15.15■□□□□ 0.02
RFX3-208ENST00000449234 EFCAB6Q5THR3 1501 aa15.15■□□□□ 0.02
RFX3-208ENST00000449234 SETBP1Q9Y6X0 1596 aa15.15■□□□□ 0.02
RFX3-208ENST00000449234 MLH3Q9UHC1 1453 aa15.14■□□□□ 0.01
RFX3-208ENST00000449234 KDM5AP29375 1690 aaKnown RBP15.14■□□□□ 0.01
RFX3-208ENST00000449234 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.14■□□□□ 0.01
RFX3-208ENST00000449234 ADAMTS8Q9UP79 889 aa15.14■□□□□ 0.01
RFX3-208ENST00000449234 EXOC6Q8TAG9 804 aa15.13■□□□□ 0.01
RFX3-208ENST00000449234 MYO3AQ8NEV4 1616 aa15.13■□□□□ 0.01
RFX3-208ENST00000449234 ZNF521Q96K83 1311 aa15.13■□□□□ 0.01
RFX3-208ENST00000449234 ANP32AP39687 249 aaKnown RBP15.12■□□□□ 0.01
RFX3-208ENST00000449234 IFT172Q9UG01 1749 aa15.12■□□□□ 0.01
RFX3-208ENST00000449234 KIDINS220Q9ULH0 1771 aa15.11■□□□□ 0.01
RFX3-208ENST00000449234 GOLGA2Q08379 1002 aa15.11■□□□□ 0.01
RFX3-208ENST00000449234 TRMT2AQ8IZ69 625 aaKnown RBP15.11■□□□□ 0.01
RFX3-208ENST00000449234 CDCA7LQ96GN5 454 aa15.1■□□□□ 0.01
RFX3-208ENST00000449234 IPO9Q96P70 1041 aaKnown RBP15.1■□□□□ 0.01
RFX3-208ENST00000449234 NOP58Q9Y2X3 529 aaKnown RBP15.09■□□□□ 0.01
RFX3-208ENST00000449234 ERVK-7P63135 1459 aa15.08■□□□□ 0.01
RFX3-208ENST00000449234 C14orf93Q9H972 538 aaKnown RBP15.08■□□□□ 0
RFX3-208ENST00000449234 MYOM1P52179 1685 aa15.08■□□□□ 0
RFX3-208ENST00000449234 ADGRB3O60242 1522 aa15.07■□□□□ 0
RFX3-208ENST00000449234 ABCA6Q8N139 1617 aa15.07■□□□□ 0
RFX3-208ENST00000449234 SLFN5Q08AF3 891 aa15.07■□□□□ 0
RFX3-208ENST00000449234 CFAP70Q5T0N1 1121 aa15.07■□□□□ 0
RFX3-208ENST00000449234 DUSP27Q5VZP5 1158 aa15.07■□□□□ 0
RFX3-208ENST00000449234 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
RFX3-208ENST00000449234 ZBTB12Q9Y330 459 aaPredicted RBP15.06■□□□□ 0
RFX3-208ENST00000449234 ADGRF5Q8IZF2 1346 aa15.06■□□□□ 0
RFX3-208ENST00000449234 SALL2Q9Y467 1007 aaPredicted RBP15.05■□□□□ -0
RFX3-208ENST00000449234 CENPJQ9HC77 1338 aaPredicted RBP15.05■□□□□ -0
RFX3-208ENST00000449234 CD109Q6YHK3 1445 aa15.05■□□□□ -0
RFX3-208ENST00000449234 POGZQ7Z3K3 1410 aa15.05■□□□□ -0
RFX3-208ENST00000449234 NEO1Q92859 1461 aa15.05■□□□□ -0
RFX3-208ENST00000449234 PPRC1Q5VV67 1664 aaKnown RBP15.04■□□□□ -0
RFX3-208ENST00000449234 OSCARQ8IYS5 282 aa15.04■□□□□ -0
RFX3-208ENST00000449234 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
RFX3-208ENST00000449234 E9PSI1 815 aa15.03■□□□□ -0
RFX3-208ENST00000449234 AAMPQ13685 434 aa15.03■□□□□ -0
RFX3-208ENST00000449234 BACH2Q9BYV9 841 aa15.03■□□□□ -0
RFX3-208ENST00000449234 ARHGAP31Q2M1Z3 1444 aa15.02■□□□□ -0
RFX3-208ENST00000449234 PLEKHH1Q9ULM0 1364 aa15.02■□□□□ -0
RFX3-208ENST00000449234 PDE4AP27815 886 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms