RNA–Protein interactions for RNA: ENST00000448879.5

SEMA3A-205, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-205ENST00000448879 PCDHB3Q9Y5E6 796 aa11.69□□□□□ -0.54
SEMA3A-205ENST00000448879 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.68□□□□□ -0.54
SEMA3A-205ENST00000448879 OATP04181 439 aa11.68□□□□□ -0.54
SEMA3A-205ENST00000448879 KDM2AQ9Y2K7 1162 aa11.68□□□□□ -0.54
SEMA3A-205ENST00000448879 KMT5BQ4FZB7 885 aa11.67□□□□□ -0.54
SEMA3A-205ENST00000448879 PPP1R18Q6NYC8 613 aa11.66□□□□□ -0.54
SEMA3A-205ENST00000448879 GNPATO15228 680 aa11.65□□□□□ -0.54
SEMA3A-205ENST00000448879 CFHP08603 1231 aa11.64□□□□□ -0.55
SEMA3A-205ENST00000448879 GGCXP38435 758 aa11.64□□□□□ -0.55
SEMA3A-205ENST00000448879 NKX2-3Q8TAU0 364 aa11.64□□□□□ -0.55
SEMA3A-205ENST00000448879 PXYLP1Q8TE99 480 aa11.64□□□□□ -0.55
SEMA3A-205ENST00000448879 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.63□□□□□ -0.55
SEMA3A-205ENST00000448879 ZPR1O75312 459 aa11.62□□□□□ -0.55
SEMA3A-205ENST00000448879 BLOC1S3Q6QNY0 202 aa11.62□□□□□ -0.55
SEMA3A-205ENST00000448879 GPIHBP1Q8IV16 184 aa11.62□□□□□ -0.55
SEMA3A-205ENST00000448879 PRKD2Q9BZL6 878 aa11.62□□□□□ -0.55
SEMA3A-205ENST00000448879 TULP1O00294 542 aaPredicted RBP11.61□□□□□ -0.55
SEMA3A-205ENST00000448879 RSPH4AQ5TD94 716 aa11.61□□□□□ -0.55
SEMA3A-205ENST00000448879 METTL3Q86U44 580 aaKnown RBP11.61□□□□□ -0.55
SEMA3A-205ENST00000448879 VSIG10Q8N0Z9 540 aa11.61□□□□□ -0.55
SEMA3A-205ENST00000448879 FECHP22830 423 aa11.6□□□□□ -0.55
SEMA3A-205ENST00000448879 ACTN4O43707 911 aaKnown RBP11.58□□□□□ -0.56
SEMA3A-205ENST00000448879 GPR37O15354 613 aa11.57□□□□□ -0.56
SEMA3A-205ENST00000448879 SLC10A3P09131 477 aa11.57□□□□□ -0.56
SEMA3A-205ENST00000448879 Q6ZNB5 142 aa11.57□□□□□ -0.56
SEMA3A-205ENST00000448879 RDH13Q8NBN7 331 aa11.56□□□□□ -0.56
SEMA3A-205ENST00000448879 TLL1O43897 1013 aa11.55□□□□□ -0.56
SEMA3A-205ENST00000448879 NR1I2O75469 434 aa11.54□□□□□ -0.56
SEMA3A-205ENST00000448879 NLRP7Q8WX94 980 aa11.53□□□□□ -0.56
SEMA3A-205ENST00000448879 TMUB1Q9BVT8 246 aa11.53□□□□□ -0.56
SEMA3A-205ENST00000448879 V9GY48 417 aaPredicted RBP11.53□□□□□ -0.56
SEMA3A-205ENST00000448879 DDX11L8A8MPP1 907 aa11.52□□□□□ -0.57
SEMA3A-205ENST00000448879 LAPTM4AQ15012 233 aa11.52□□□□□ -0.57
SEMA3A-205ENST00000448879 DAXXQ9UER7 740 aaPredicted RBP11.52□□□□□ -0.57
SEMA3A-205ENST00000448879 GFRA3O60609 400 aa11.51□□□□□ -0.57
SEMA3A-205ENST00000448879 PUS10Q3MIT2 529 aaKnown RBP11.49□□□□□ -0.57
SEMA3A-205ENST00000448879 SULF1Q8IWU6 871 aa11.48□□□□□ -0.57
SEMA3A-205ENST00000448879 RNF223E7ERA6 249 aa11.47□□□□□ -0.57
SEMA3A-205ENST00000448879 S1PR4O95977 384 aa11.47□□□□□ -0.57
SEMA3A-205ENST00000448879 ADH1BP00325 375 aa11.47□□□□□ -0.57
SEMA3A-205ENST00000448879 SCUBE3Q8IX30 993 aa11.44□□□□□ -0.58
SEMA3A-205ENST00000448879 PHOX2BQ99453 314 aa11.44□□□□□ -0.58
SEMA3A-205ENST00000448879 PPEF1O14829 653 aaPredicted RBP11.43□□□□□ -0.58
SEMA3A-205ENST00000448879 SLC19A1P41440 591 aa11.43□□□□□ -0.58
SEMA3A-205ENST00000448879 MAP2K5Q13163 448 aa11.43□□□□□ -0.58
SEMA3A-205ENST00000448879 SLC6A16Q9GZN6 736 aa11.43□□□□□ -0.58
SEMA3A-205ENST00000448879 PDZRN3Q9UPQ7 1066 aa11.43□□□□□ -0.58
SEMA3A-205ENST00000448879 NRG2O14511 850 aaPredicted RBP11.42□□□□□ -0.58
SEMA3A-205ENST00000448879 FUT2Q10981 343 aa11.42□□□□□ -0.58
SEMA3A-205ENST00000448879 ANKLE1Q8NAG6 615 aa11.42□□□□□ -0.58
SEMA3A-205ENST00000448879 SPSB2Q99619 263 aa11.41□□□□□ -0.58
SEMA3A-205ENST00000448879 ATP6V1AP38606 617 aa11.39□□□□□ -0.59
SEMA3A-205ENST00000448879 GCGRP47871 477 aa11.39□□□□□ -0.59
SEMA3A-205ENST00000448879 MORN1Q5T089 497 aa11.38□□□□□ -0.59
SEMA3A-205ENST00000448879 IRF6O14896 467 aa11.36□□□□□ -0.59
SEMA3A-205ENST00000448879 GRIPAP1Q4V328 841 aa11.36□□□□□ -0.59
SEMA3A-205ENST00000448879 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
SEMA3A-205ENST00000448879 FMNL1O95466 1100 aaPredicted RBP11.35□□□□□ -0.59
SEMA3A-205ENST00000448879 MDM2Q00987 491 aaPredicted RBP11.35□□□□□ -0.59
SEMA3A-205ENST00000448879 TRAF7Q6Q0C0 670 aa11.35□□□□□ -0.59
SEMA3A-205ENST00000448879 SPRYD7Q5W111 196 aa11.34□□□□□ -0.59
SEMA3A-205ENST00000448879 SLC27A5Q9Y2P5 690 aa11.34□□□□□ -0.59
SEMA3A-205ENST00000448879 ZNF697Q5TEC3 545 aa11.33□□□□□ -0.6
SEMA3A-205ENST00000448879 LIAT1Q6ZQX7 453 aa11.33□□□□□ -0.6
SEMA3A-205ENST00000448879 CCDC102AQ96A19 550 aa11.33□□□□□ -0.6
SEMA3A-205ENST00000448879 ZNF598Q86UK7 904 aaKnown RBP11.32□□□□□ -0.6
SEMA3A-205ENST00000448879 KRI1Q8N9T8 703 aaKnown RBP11.32□□□□□ -0.6
SEMA3A-205ENST00000448879 EMID1Q96A84 441 aaPredicted RBP11.32□□□□□ -0.6
SEMA3A-205ENST00000448879 CD46P15529 392 aa11.3□□□□□ -0.6
SEMA3A-205ENST00000448879 LMOD2Q6P5Q4 547 aa11.29□□□□□ -0.6
SEMA3A-205ENST00000448879 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.29□□□□□ -0.6
SEMA3A-205ENST00000448879 THAP11Q96EK4 314 aa11.29□□□□□ -0.6
SEMA3A-205ENST00000448879 PLA2G2CQ5R387 149 aa11.28□□□□□ -0.6
SEMA3A-205ENST00000448879 FCF1Q9Y324 198 aaKnown RBP11.28□□□□□ -0.6
SEMA3A-205ENST00000448879 KDM4AO75164 1064 aa11.27□□□□□ -0.61
SEMA3A-205ENST00000448879 Q3C1V9 767 aa11.27□□□□□ -0.61
SEMA3A-205ENST00000448879 TNFRSF10AO00220 468 aa11.26□□□□□ -0.61
SEMA3A-205ENST00000448879 CLCN1P35523 988 aa11.26□□□□□ -0.61
SEMA3A-205ENST00000448879 BRICD5Q6PL45 260 aa11.26□□□□□ -0.61
SEMA3A-205ENST00000448879 RNF19BQ6ZMZ0 732 aa11.26□□□□□ -0.61
SEMA3A-205ENST00000448879 FAM160A2Q8N612 972 aaPredicted RBP11.26□□□□□ -0.61
SEMA3A-205ENST00000448879 GPCPD1Q9NPB8 672 aa11.26□□□□□ -0.61
SEMA3A-205ENST00000448879 PRDM9Q9NQV7 894 aa11.26□□□□□ -0.61
SEMA3A-205ENST00000448879 SALL2Q9Y467 1007 aaPredicted RBP11.26□□□□□ -0.61
SEMA3A-205ENST00000448879 LCE2BO14633 110 aa11.25□□□□□ -0.61
SEMA3A-205ENST00000448879 PKDCCQ504Y2 493 aa11.25□□□□□ -0.61
SEMA3A-205ENST00000448879 TRIM67Q6ZTA4 783 aa11.25□□□□□ -0.61
SEMA3A-205ENST00000448879 USP46P62068 366 aa11.23□□□□□ -0.61
SEMA3A-205ENST00000448879 PRR20EP86478 221 aa11.23□□□□□ -0.61
SEMA3A-205ENST00000448879 PRR20CP86479 221 aa11.23□□□□□ -0.61
SEMA3A-205ENST00000448879 PRR20DP86480 221 aa11.23□□□□□ -0.61
SEMA3A-205ENST00000448879 PRR20BP86481 221 aa11.23□□□□□ -0.61
SEMA3A-205ENST00000448879 PRR20AP86496 221 aa11.23□□□□□ -0.61
SEMA3A-205ENST00000448879 FOXC1Q12948 553 aa11.23□□□□□ -0.61
SEMA3A-205ENST00000448879 MSS51Q4VC12 460 aa11.23□□□□□ -0.61
SEMA3A-205ENST00000448879 FAM187AA6NFU0 413 aa11.22□□□□□ -0.61
SEMA3A-205ENST00000448879 ZBTB24O43167 697 aaPredicted RBP11.22□□□□□ -0.61
SEMA3A-205ENST00000448879 CD2BP2O95400 341 aaKnown RBP11.21□□□□□ -0.61
SEMA3A-205ENST00000448879 RPIAP49247 311 aa11.21□□□□□ -0.61
SEMA3A-205ENST00000448879 NUTM1Q86Y26 1132 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms