RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 POLR3GLQ9BT43 218 aa24.49■■□□□ 1.51
LMNA-208ENST00000448611 PRKRIP1Q9H875 184 aaPredicted RBP24.49■■□□□ 1.51
LMNA-208ENST00000448611 ADGRF5Q8IZF2 1346 aa24.46■■□□□ 1.51
LMNA-208ENST00000448611 SCAF11Q99590 1463 aaKnown RBP24.45■■□□□ 1.5
LMNA-208ENST00000448611 MLECQ14165 292 aa24.43■■□□□ 1.5
LMNA-208ENST00000448611 PPLO60437 1756 aa24.43■■□□□ 1.5
LMNA-208ENST00000448611 CHGAP10645 457 aaKnown RBP24.42■■□□□ 1.5
LMNA-208ENST00000448611 PPP6R1Q9UPN7 881 aa24.41■■□□□ 1.5
LMNA-208ENST00000448611 DISP3Q9P2K9 1392 aa24.41■■□□□ 1.5
LMNA-208ENST00000448611 RPGRIP1LQ68CZ1 1315 aa24.4■■□□□ 1.5
LMNA-208ENST00000448611 PREX1Q8TCU6 1659 aa24.4■■□□□ 1.5
LMNA-208ENST00000448611 GTF3C3Q9Y5Q9 886 aa24.39■■□□□ 1.5
LMNA-208ENST00000448611 CFAP70Q5T0N1 1121 aa24.39■■□□□ 1.49
LMNA-208ENST00000448611 TMF1P82094 1093 aa24.37■■□□□ 1.49
LMNA-208ENST00000448611 SLC52A1Q9NWF4 448 aa24.37■■□□□ 1.49
LMNA-208ENST00000448611 PIK3C2GO75747 1445 aa24.36■■□□□ 1.49
LMNA-208ENST00000448611 IDI1Q13907 227 aa24.35■■□□□ 1.49
LMNA-208ENST00000448611 CCDC184Q52MB2 194 aa24.34■■□□□ 1.49
LMNA-208ENST00000448611 EIF3AQ14152 1382 aaKnown RBP24.34■■□□□ 1.49
LMNA-208ENST00000448611 NEXMIFQ5QGS0 1516 aa24.33■■□□□ 1.49
LMNA-208ENST00000448611 SETBP1Q9Y6X0 1596 aa24.33■■□□□ 1.49
LMNA-208ENST00000448611 ERVK-7P63135 1459 aa24.33■■□□□ 1.48
LMNA-208ENST00000448611 CLTCQ00610 1675 aaKnown RBP24.32■■□□□ 1.48
LMNA-208ENST00000448611 FBXO31Q5XUX0 539 aaPredicted RBP24.29■■□□□ 1.48
LMNA-208ENST00000448611 C14orf93Q9H972 538 aaKnown RBP24.29■■□□□ 1.48
LMNA-208ENST00000448611 TMEM131LA2VDJ0 1609 aa24.29■■□□□ 1.48
LMNA-208ENST00000448611 ESF1Q9H501 851 aaKnown RBP24.29■■□□□ 1.48
LMNA-208ENST00000448611 ADGRB1O14514 1584 aa24.27■■□□□ 1.48
LMNA-208ENST00000448611 MRS2Q9HD23 443 aa24.27■■□□□ 1.48
LMNA-208ENST00000448611 VGFO15240 615 aaPredicted RBP24.26■■□□□ 1.47
LMNA-208ENST00000448611 ZFYVE9O95405 1425 aa24.26■■□□□ 1.47
LMNA-208ENST00000448611 SPATA31D1Q6ZQQ2 1576 aa24.25■■□□□ 1.47
LMNA-208ENST00000448611 MYO3AQ8NEV4 1616 aa24.25■■□□□ 1.47
LMNA-208ENST00000448611 PER1O15534 1290 aaPredicted RBP24.25■■□□□ 1.47
LMNA-208ENST00000448611 KTN1Q86UP2 1357 aaKnown RBP24.25■■□□□ 1.47
LMNA-208ENST00000448611 MYO5BQ9ULV0 1848 aa24.24■■□□□ 1.47
LMNA-208ENST00000448611 CDCA8Q53HL2 280 aa24.23■■□□□ 1.47
LMNA-208ENST00000448611 SLC24A1O60721 1099 aa24.2■■□□□ 1.46
LMNA-208ENST00000448611 CNGB1Q14028 1251 aaPredicted RBP24.2■■□□□ 1.46
LMNA-208ENST00000448611 NUTM2DQ5VT03 806 aaPredicted RBP24.2■■□□□ 1.46
LMNA-208ENST00000448611 SBNO2Q9Y2G9 1366 aa24.2■■□□□ 1.46
LMNA-208ENST00000448611 RALBP1Q15311 655 aa24.2■■□□□ 1.46
LMNA-208ENST00000448611 PANK3Q9H999 370 aa24.2■■□□□ 1.46
LMNA-208ENST00000448611 FER1L4A9Z1Z3 1794 aa24.18■■□□□ 1.46
LMNA-208ENST00000448611 PARD3Q8TEW0 1356 aa24.16■■□□□ 1.46
LMNA-208ENST00000448611 HNRNPUQ00839 825 aaKnown RBP eCLIP24.16■■□□□ 1.46
LMNA-208ENST00000448611 ZMYM3Q14202 1370 aa24.16■■□□□ 1.46
LMNA-208ENST00000448611 KDM5AP29375 1690 aaKnown RBP24.15■■□□□ 1.46
LMNA-208ENST00000448611 ADAMTSL3P82987 1691 aa24.15■■□□□ 1.46
LMNA-208ENST00000448611 CENPJQ9HC77 1338 aaPredicted RBP24.15■■□□□ 1.46
LMNA-208ENST00000448611 TMEM132EQ6IEE7 984 aa24.15■■□□□ 1.46
LMNA-208ENST00000448611 FAM9BQ8IZU0 186 aa24.15■■□□□ 1.46
LMNA-208ENST00000448611 MYOM1P52179 1685 aa24.14■■□□□ 1.46
LMNA-208ENST00000448611 MYBBP1AQ9BQG0 1328 aaKnown RBP24.14■■□□□ 1.46
LMNA-208ENST00000448611 TRAK1Q9UPV9 953 aa24.14■■□□□ 1.45
LMNA-208ENST00000448611 A2ML1A8K2U0 1454 aa24.13■■□□□ 1.45
LMNA-208ENST00000448611 PLPPR3Q6T4P5 718 aa24.12■■□□□ 1.45
LMNA-208ENST00000448611 BRD4O60885 1362 aaPredicted RBP24.11■■□□□ 1.45
LMNA-208ENST00000448611 RIMS1Q86UR5 1692 aaKnown RBP24.1■■□□□ 1.45
LMNA-208ENST00000448611 QRICH2Q9H0J4 1663 aa24.1■■□□□ 1.45
LMNA-208ENST00000448611 STAG3Q9UJ98 1225 aa24.1■■□□□ 1.45
LMNA-208ENST00000448611 ASXL1Q8IXJ9 1541 aa24.09■■□□□ 1.45
LMNA-208ENST00000448611 CEBPAP49715 358 aaPredicted RBP24.09■■□□□ 1.45
LMNA-208ENST00000448611 ARHGEF28Q8N1W1 1705 aaKnown RBP24.08■■□□□ 1.45
LMNA-208ENST00000448611 TMC1Q8TDI8 760 aa24.06■■□□□ 1.44
LMNA-208ENST00000448611 PNISRQ8TF01 805 aaKnown RBP24.06■■□□□ 1.44
LMNA-208ENST00000448611 CC2D1BQ5T0F9 858 aaKnown RBP24.05■■□□□ 1.44
LMNA-208ENST00000448611 C3P01024 1663 aa24.04■■□□□ 1.44
LMNA-208ENST00000448611 KDM4FA0A1W2PPD8 638 aa24.04■■□□□ 1.44
LMNA-208ENST00000448611 NLRP13Q86W25 1043 aa24.04■■□□□ 1.44
LMNA-208ENST00000448611 RIMS2Q9UQ26 1411 aa24.03■■□□□ 1.44
LMNA-208ENST00000448611 KNSTRNQ9Y448 316 aa24.03■■□□□ 1.44
LMNA-208ENST00000448611 ALKQ9UM73 1620 aa24.02■■□□□ 1.44
LMNA-208ENST00000448611 TNRQ92752 1358 aa24.02■■□□□ 1.44
LMNA-208ENST00000448611 AMER1Q5JTC6 1135 aaPredicted RBP24.02■■□□□ 1.44
LMNA-208ENST00000448611 LRPPRCP42704 1394 aaKnown RBP24■■□□□ 1.43
LMNA-208ENST00000448611 PTPRMP28827 1452 aa24■■□□□ 1.43
LMNA-208ENST00000448611 ZBED9Q6R2W3 1325 aa24■■□□□ 1.43
LMNA-208ENST00000448611 NPC1L1Q9UHC9 1359 aa23.99■■□□□ 1.43
LMNA-208ENST00000448611 YTHDC2Q9H6S0 1430 aaKnown RBP23.98■■□□□ 1.43
LMNA-208ENST00000448611 SENP3Q9H4L4 574 aaPredicted RBP23.98■■□□□ 1.43
LMNA-208ENST00000448611 TULP4Q9NRJ4 1543 aa23.97■■□□□ 1.43
LMNA-208ENST00000448611 PUS7Q96PZ0 661 aaKnown RBP23.96■■□□□ 1.43
LMNA-208ENST00000448611 STK26Q9P289 416 aa23.94■■□□□ 1.42
LMNA-208ENST00000448611 SETD1AO15047 1707 aaKnown RBP23.94■■□□□ 1.42
LMNA-208ENST00000448611 EVC2Q86UK5 1308 aa23.93■■□□□ 1.42
LMNA-208ENST00000448611 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.93■■□□□ 1.425e-9■□□□□ 8
LMNA-208ENST00000448611 CARD14Q9BXL6 1004 aa23.93■■□□□ 1.42
LMNA-208ENST00000448611 UBR1Q8IWV7 1749 aa23.92■■□□□ 1.42
LMNA-208ENST00000448611 NRXN3Q9Y4C0 1643 aa23.92■■□□□ 1.42
LMNA-208ENST00000448611 NLRP1Q9C000 1473 aa23.89■■□□□ 1.41
LMNA-208ENST00000448611 SUPT16HQ9Y5B9 1047 aaKnown RBP23.88■■□□□ 1.41
LMNA-208ENST00000448611 DLC1Q96QB1 1528 aa23.88■■□□□ 1.41
LMNA-208ENST00000448611 PPP2R1AP30153 589 aa23.88■■□□□ 1.41
LMNA-208ENST00000448611 PRAM1Q96QH2 718 aa23.88■■□□□ 1.41
LMNA-208ENST00000448611 SLC12A5Q9H2X9 1139 aa23.88■■□□□ 1.41
LMNA-208ENST00000448611 TMEM2Q9UHN6 1383 aa23.87■■□□□ 1.41
LMNA-208ENST00000448611 SAFB2Q14151 953 aaKnown RBP eCLIP23.87■■□□□ 1.41
LMNA-208ENST00000448611 HDGFP51858 240 aaKnown RBP23.86■■□□□ 1.41
LMNA-208ENST00000448611 POGKQ9P215 609 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms