RNA–Protein interactions for RNA: ENST00000448136.5

SNHG16-201, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 1 (best) BASIC

Gene SNHG16, Length 3,607 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-201ENST00000448136 PLA2R1Q13018 1463 aa12.94□□□□□ -0.34
SNHG16-201ENST00000448136 RLBP1P12271 317 aa12.94□□□□□ -0.34
SNHG16-201ENST00000448136 TRMT2AQ8IZ69 625 aaKnown RBP12.93□□□□□ -0.34
SNHG16-201ENST00000448136 PCDHB15Q9Y5E8 787 aa12.93□□□□□ -0.34
SNHG16-201ENST00000448136 ADGRL2O95490 1459 aa12.93□□□□□ -0.34
SNHG16-201ENST00000448136 ARHGEF12Q9NZN5 1544 aa12.93□□□□□ -0.34
SNHG16-201ENST00000448136 PBRM1Q86U86 1689 aa12.93□□□□□ -0.34
SNHG16-201ENST00000448136 BCL2L13Q9BXK5 485 aa12.93□□□□□ -0.34
SNHG16-201ENST00000448136 CDC42BPAQ5VT25 1732 aa12.93□□□□□ -0.34
SNHG16-201ENST00000448136 AMER1Q5JTC6 1135 aaPredicted RBP12.92□□□□□ -0.34
SNHG16-201ENST00000448136 A2MP01023 1474 aa12.92□□□□□ -0.34
SNHG16-201ENST00000448136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.34
SNHG16-201ENST00000448136 FOXD4L1Q9NU39 408 aa12.92□□□□□ -0.34
SNHG16-201ENST00000448136 ANKRD30AQ9BXX3 1397 aa12.92□□□□□ -0.34
SNHG16-201ENST00000448136 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
SNHG16-201ENST00000448136 ADCY10Q96PN6 1610 aa12.91□□□□□ -0.34
SNHG16-201ENST00000448136 RAPGEF6Q8TEU7 1601 aa12.91□□□□□ -0.34
SNHG16-201ENST00000448136 ERBINQ96RT1 1412 aa12.91□□□□□ -0.34
SNHG16-201ENST00000448136 WDR7Q9Y4E6 1490 aa12.9□□□□□ -0.34
SNHG16-201ENST00000448136 FSD2A1L4K1 749 aa12.9□□□□□ -0.34
SNHG16-201ENST00000448136 L1TD1Q5T7N2 865 aaKnown RBP12.9□□□□□ -0.34
SNHG16-201ENST00000448136 KIAA0556O60303 1618 aa12.9□□□□□ -0.34
SNHG16-201ENST00000448136 CANXP27824 592 aaKnown RBP12.89□□□□□ -0.35
SNHG16-201ENST00000448136 CLUAP1Q96AJ1 413 aa12.89□□□□□ -0.35
SNHG16-201ENST00000448136 C9orf84Q5VXU9 1444 aa12.89□□□□□ -0.35
SNHG16-201ENST00000448136 RRP7AQ9Y3A4 280 aaKnown RBP12.89□□□□□ -0.35
SNHG16-201ENST00000448136 TROQ12816 1431 aaPredicted RBP12.89□□□□□ -0.35
SNHG16-201ENST00000448136 WDR43Q15061 677 aaKnown RBP eCLIP12.88□□□□□ -0.355e-28■□□□□ 9.6
SNHG16-201ENST00000448136 GAS2L3Q86XJ1 694 aa12.88□□□□□ -0.35
SNHG16-201ENST00000448136 ADAMTS12P58397 1594 aa12.88□□□□□ -0.35
SNHG16-201ENST00000448136 BECN1Q14457 450 aa12.88□□□□□ -0.35
SNHG16-201ENST00000448136 TRAK2O60296 914 aa12.87□□□□□ -0.35
SNHG16-201ENST00000448136 CLCN1P35523 988 aa12.87□□□□□ -0.35
SNHG16-201ENST00000448136 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
SNHG16-201ENST00000448136 PRDM15P57071 1507 aaPredicted RBP12.86□□□□□ -0.35
SNHG16-201ENST00000448136 EIF3AQ14152 1382 aaKnown RBP12.86□□□□□ -0.35
SNHG16-201ENST00000448136 RRP9O43818 475 aaKnown RBP12.86□□□□□ -0.35
SNHG16-201ENST00000448136 TBC1D32Q96NH3 1257 aa12.86□□□□□ -0.35
SNHG16-201ENST00000448136 FAM135AQ9P2D6 1515 aa12.86□□□□□ -0.35
SNHG16-201ENST00000448136 MCM4P33991 863 aa12.86□□□□□ -0.35
SNHG16-201ENST00000448136 MYH16Q9H6N6 1097 aa12.86□□□□□ -0.35
SNHG16-201ENST00000448136 MYO5CQ9NQX4 1742 aa12.86□□□□□ -0.35
SNHG16-201ENST00000448136 PTPRGP23470 1445 aa12.85□□□□□ -0.35
SNHG16-201ENST00000448136 ESPNB1AK53 854 aa12.85□□□□□ -0.35
SNHG16-201ENST00000448136 MFAP1P55081 439 aaKnown RBP12.85□□□□□ -0.35
SNHG16-201ENST00000448136 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
SNHG16-201ENST00000448136 RTEL1-TNFRSF6BF6WH68 1400 aa12.84□□□□□ -0.35
SNHG16-201ENST00000448136 EIF4G3O43432 1585 aaKnown RBP12.84□□□□□ -0.35
SNHG16-201ENST00000448136 GPRASP1Q5JY77 1395 aa12.84□□□□□ -0.35
SNHG16-201ENST00000448136 NKTRP30414 1462 aaKnown RBP12.84□□□□□ -0.35
SNHG16-201ENST00000448136 FAM13BQ9NYF5 915 aa12.83□□□□□ -0.35
SNHG16-201ENST00000448136 PRDM10Q9NQV6 1147 aa12.83□□□□□ -0.36
SNHG16-201ENST00000448136 TRIM44Q96DX7 344 aaPredicted RBP12.83□□□□□ -0.36
SNHG16-201ENST00000448136 CCDC144AA2RUR9 1427 aa12.83□□□□□ -0.36
SNHG16-201ENST00000448136 PLEKHH2Q8IVE3 1493 aa12.83□□□□□ -0.36
SNHG16-201ENST00000448136 TMF1P82094 1093 aa12.82□□□□□ -0.36
SNHG16-201ENST00000448136 KNSTRNQ9Y448 316 aa12.82□□□□□ -0.36
SNHG16-201ENST00000448136 INSRP06213 1382 aa12.82□□□□□ -0.36
SNHG16-201ENST00000448136 ZNF692Q9BU19 519 aaPredicted RBP12.82□□□□□ -0.36
SNHG16-201ENST00000448136 MAPK8IP2Q13387 824 aaPredicted RBP12.82□□□□□ -0.36
SNHG16-201ENST00000448136 CARD14Q9BXL6 1004 aa12.82□□□□□ -0.36
SNHG16-201ENST00000448136 GRPEL1Q9HAV7 217 aa12.82□□□□□ -0.36
SNHG16-201ENST00000448136 TNNT2P45379 298 aaPredicted RBP12.81□□□□□ -0.36
SNHG16-201ENST00000448136 ITSN2Q9NZM3 1697 aa12.81□□□□□ -0.36
SNHG16-201ENST00000448136 KIAA1211Q6ZU35 1233 aa12.81□□□□□ -0.36
SNHG16-201ENST00000448136 ABCC10Q5T3U5 1492 aa12.8□□□□□ -0.36
SNHG16-201ENST00000448136 WWC1Q8IX03 1113 aa12.8□□□□□ -0.36
SNHG16-201ENST00000448136 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.8□□□□□ -0.36
SNHG16-201ENST00000448136 TSPY4P0CV99 314 aa12.79□□□□□ -0.36
SNHG16-201ENST00000448136 TSPY10P0CW01 314 aa12.79□□□□□ -0.36
SNHG16-201ENST00000448136 CD2BP2O95400 341 aaKnown RBP12.79□□□□□ -0.36
SNHG16-201ENST00000448136 UPF2Q9HAU5 1272 aaKnown RBP12.79□□□□□ -0.36
SNHG16-201ENST00000448136 MYOM1P52179 1685 aa12.78□□□□□ -0.36
SNHG16-201ENST00000448136 RARSP54136 660 aaKnown RBP12.77□□□□□ -0.36
SNHG16-201ENST00000448136 ZHX1Q9UKY1 873 aaPredicted RBP12.77□□□□□ -0.36
SNHG16-201ENST00000448136 CENPJQ9HC77 1338 aaPredicted RBP12.77□□□□□ -0.37
SNHG16-201ENST00000448136 MPNDQ8N594 471 aa12.76□□□□□ -0.37
SNHG16-201ENST00000448136 AK9Q5TCS8 1911 aa12.76□□□□□ -0.37
SNHG16-201ENST00000448136 MRE11P49959 708 aa12.75□□□□□ -0.37
SNHG16-201ENST00000448136 FBLN2P98095 1184 aa12.75□□□□□ -0.37
SNHG16-201ENST00000448136 JARID2Q92833 1246 aaPredicted RBP12.75□□□□□ -0.37
SNHG16-201ENST00000448136 R3HCC1Q9Y3T6 440 aaKnown RBP12.75□□□□□ -0.37
SNHG16-201ENST00000448136 E9PSI1 815 aa12.75□□□□□ -0.37
SNHG16-201ENST00000448136 CLASP1Q7Z460 1538 aa12.74□□□□□ -0.37
SNHG16-201ENST00000448136 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
SNHG16-201ENST00000448136 C22orf23Q9BZE7 217 aa12.74□□□□□ -0.37
SNHG16-201ENST00000448136 PDE3AQ14432 1141 aa12.74□□□□□ -0.37
SNHG16-201ENST00000448136 ATP10BO94823 1461 aa12.73□□□□□ -0.37
SNHG16-201ENST00000448136 CGNL1Q0VF96 1302 aa12.73□□□□□ -0.37
SNHG16-201ENST00000448136 MAPK8IP3Q9UPT6 1336 aa12.73□□□□□ -0.37
SNHG16-201ENST00000448136 NCLP19338 710 aaKnown RBP12.73□□□□□ -0.37
SNHG16-201ENST00000448136 DDIT3P35638 169 aa12.73□□□□□ -0.37
SNHG16-201ENST00000448136 TNPO1Q92973 898 aaKnown RBP12.73□□□□□ -0.37
SNHG16-201ENST00000448136 SAMD9LQ8IVG5 1584 aa12.72□□□□□ -0.37
SNHG16-201ENST00000448136 CHAMP1Q96JM3 812 aa12.72□□□□□ -0.37
SNHG16-201ENST00000448136 ASXL1Q8IXJ9 1541 aa12.72□□□□□ -0.37
SNHG16-201ENST00000448136 PLEKHD1A6NEE1 506 aa12.71□□□□□ -0.37
SNHG16-201ENST00000448136 XPCQ01831 940 aaPredicted RBP12.71□□□□□ -0.37
SNHG16-201ENST00000448136 TSR2Q969E8 191 aaKnown RBP12.71□□□□□ -0.37
SNHG16-201ENST00000448136 SHANK2Q9UPX8 1470 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms