RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 RIMS2Q9UQ26 1411 aa16.47■□□□□ 0.23
NPIPB3-202ENST00000448012 LRRC7Q96NW7 1537 aa16.47■□□□□ 0.23
NPIPB3-202ENST00000448012 KCNA6P17658 529 aa16.47■□□□□ 0.23
NPIPB3-202ENST00000448012 PROSER2Q86WR7 435 aaPredicted RBP16.45■□□□□ 0.22
NPIPB3-202ENST00000448012 PLEKHG1Q9ULL1 1385 aa16.44■□□□□ 0.22
NPIPB3-202ENST00000448012 ZNF326Q5BKZ1 582 aaKnown RBP16.44■□□□□ 0.22
NPIPB3-202ENST00000448012 NAIPQ13075 1403 aa16.43■□□□□ 0.22
NPIPB3-202ENST00000448012 HSPA1LP34931 641 aa16.42■□□□□ 0.22
NPIPB3-202ENST00000448012 E9PCH4 1651 aa16.42■□□□□ 0.22
NPIPB3-202ENST00000448012 ZFYVE9O95405 1425 aa16.41■□□□□ 0.22
NPIPB3-202ENST00000448012 TMEM94Q12767 1356 aa16.4■□□□□ 0.22
NPIPB3-202ENST00000448012 HFM1A2PYH4 1435 aa16.4■□□□□ 0.22
NPIPB3-202ENST00000448012 NUTM2DQ5VT03 806 aaPredicted RBP16.4■□□□□ 0.22
NPIPB3-202ENST00000448012 SLC4A1APQ9BWU0 796 aaKnown RBP16.4■□□□□ 0.22
NPIPB3-202ENST00000448012 TBX22Q9Y458 520 aa16.4■□□□□ 0.22
NPIPB3-202ENST00000448012 TMEM131LA2VDJ0 1609 aa16.39■□□□□ 0.21
NPIPB3-202ENST00000448012 C14orf37Q86TY3 774 aa16.39■□□□□ 0.21
NPIPB3-202ENST00000448012 MSH6P52701 1360 aa16.38■□□□□ 0.21
NPIPB3-202ENST00000448012 NKTRP30414 1462 aaKnown RBP16.37■□□□□ 0.21
NPIPB3-202ENST00000448012 ACIN1Q9UKV3 1341 aaKnown RBP16.36■□□□□ 0.21
NPIPB3-202ENST00000448012 STRCP1A6NGW2 1772 aa16.36■□□□□ 0.21
NPIPB3-202ENST00000448012 RBM33Q96EV2 1170 aaKnown RBP16.34■□□□□ 0.21
NPIPB3-202ENST00000448012 PIK3R4Q99570 1358 aa16.34■□□□□ 0.21
NPIPB3-202ENST00000448012 DIP2AQ14689 1571 aa16.32■□□□□ 0.2
NPIPB3-202ENST00000448012 SPHKAPQ2M3C7 1700 aa16.32■□□□□ 0.2
NPIPB3-202ENST00000448012 NWD1Q149M9 1564 aa16.31■□□□□ 0.2
NPIPB3-202ENST00000448012 TRPM2O94759 1503 aa16.3■□□□□ 0.2
NPIPB3-202ENST00000448012 VGFO15240 615 aaPredicted RBP16.3■□□□□ 0.2
NPIPB3-202ENST00000448012 MYO5BQ9ULV0 1848 aa16.3■□□□□ 0.2
NPIPB3-202ENST00000448012 FAM135BQ49AJ0 1406 aa16.29■□□□□ 0.2
NPIPB3-202ENST00000448012 ADAMTS13Q76LX8 1427 aa16.29■□□□□ 0.2
NPIPB3-202ENST00000448012 ATF3P18847 181 aa16.29■□□□□ 0.2
NPIPB3-202ENST00000448012 AMOTL2Q9Y2J4 779 aa16.29■□□□□ 0.2
NPIPB3-202ENST00000448012 NCOA3Q9Y6Q9 1424 aa16.28■□□□□ 0.2
NPIPB3-202ENST00000448012 SLAIN2Q9P270 581 aa16.28■□□□□ 0.2
NPIPB3-202ENST00000448012 ALKQ9UM73 1620 aa16.27■□□□□ 0.2
NPIPB3-202ENST00000448012 RPGRIP1LQ68CZ1 1315 aa16.27■□□□□ 0.2
NPIPB3-202ENST00000448012 CADPS2Q86UW7 1296 aa16.27■□□□□ 0.2
NPIPB3-202ENST00000448012 C19orf44Q9H6X5 657 aa16.26■□□□□ 0.19
NPIPB3-202ENST00000448012 MPHOSPH9Q99550 1183 aa16.25■□□□□ 0.19
NPIPB3-202ENST00000448012 CLTCL1P53675 1640 aa16.25■□□□□ 0.19
NPIPB3-202ENST00000448012 ILDR2Q71H61 639 aa16.24■□□□□ 0.19
NPIPB3-202ENST00000448012 CCDC144AA2RUR9 1427 aa16.24■□□□□ 0.19
NPIPB3-202ENST00000448012 SETBP1Q9Y6X0 1596 aa16.22■□□□□ 0.19
NPIPB3-202ENST00000448012 CHD2O14647 1828 aaKnown RBP16.22■□□□□ 0.19
NPIPB3-202ENST00000448012 FOXD1Q16676 465 aa16.22■□□□□ 0.19
NPIPB3-202ENST00000448012 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.19
NPIPB3-202ENST00000448012 SETD5Q9C0A6 1442 aa16.21■□□□□ 0.19
NPIPB3-202ENST00000448012 XIRP1Q702N8 1843 aaKnown RBP16.21■□□□□ 0.19
NPIPB3-202ENST00000448012 KIF1BO60333 1816 aa16.2■□□□□ 0.18
NPIPB3-202ENST00000448012 SOCS7O14512 581 aa16.2■□□□□ 0.18
NPIPB3-202ENST00000448012 NEXMIFQ5QGS0 1516 aa16.19■□□□□ 0.18
NPIPB3-202ENST00000448012 METP08581 1390 aa16.19■□□□□ 0.18
NPIPB3-202ENST00000448012 RGL3Q3MIN7 710 aa16.19■□□□□ 0.18
NPIPB3-202ENST00000448012 PTPRUQ92729 1446 aa16.19■□□□□ 0.18
NPIPB3-202ENST00000448012 ROBO1Q9Y6N7 1651 aa16.17■□□□□ 0.18
NPIPB3-202ENST00000448012 DCCP43146 1447 aa16.16■□□□□ 0.18
NPIPB3-202ENST00000448012 ANKRD30BQ9BXX2 1392 aa16.15■□□□□ 0.18
NPIPB3-202ENST00000448012 JCADQ9P266 1359 aa16.14■□□□□ 0.17
NPIPB3-202ENST00000448012 RAB3GAP2Q9H2M9 1393 aa16.13■□□□□ 0.17
NPIPB3-202ENST00000448012 NRXN3Q9Y4C0 1643 aa16.13■□□□□ 0.17
NPIPB3-202ENST00000448012 ADGRL3Q9HAR2 1447 aa16.11■□□□□ 0.17
NPIPB3-202ENST00000448012 XRN1Q8IZH2 1706 aaKnown RBP16.11■□□□□ 0.17
NPIPB3-202ENST00000448012 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.11■□□□□ 0.17
NPIPB3-202ENST00000448012 MEX3CQ5U5Q3 659 aaKnown RBP16.1■□□□□ 0.17
NPIPB3-202ENST00000448012 BRINP3Q76B58 766 aa16.1■□□□□ 0.17
NPIPB3-202ENST00000448012 PTCH1Q13635 1447 aa16.1■□□□□ 0.17
NPIPB3-202ENST00000448012 ADGRF5Q8IZF2 1346 aa16.09■□□□□ 0.17
NPIPB3-202ENST00000448012 PHLPP1O60346 1717 aa16.08■□□□□ 0.17
NPIPB3-202ENST00000448012 SPATA31A6Q5VVP1 1343 aa16.08■□□□□ 0.16
NPIPB3-202ENST00000448012 SPATA31E1Q6ZUB1 1445 aa16.08■□□□□ 0.16
NPIPB3-202ENST00000448012 STK26Q9P289 416 aa16.07■□□□□ 0.16
NPIPB3-202ENST00000448012 MST1RQ04912 1400 aa16.06■□□□□ 0.16
NPIPB3-202ENST00000448012 ROBO2Q9HCK4 1378 aa16.06■□□□□ 0.16
NPIPB3-202ENST00000448012 HRCP23327 699 aa16.06■□□□□ 0.16
NPIPB3-202ENST00000448012 LRRC59Q96AG4 307 aaKnown RBP16.05■□□□□ 0.16
NPIPB3-202ENST00000448012 PPLO60437 1756 aa16.05■□□□□ 0.16
NPIPB3-202ENST00000448012 AHDC1Q5TGY3 1603 aaPredicted RBP16.04■□□□□ 0.16
NPIPB3-202ENST00000448012 ASXL1Q8IXJ9 1541 aa16.03■□□□□ 0.16
NPIPB3-202ENST00000448012 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.16
NPIPB3-202ENST00000448012 LRPPRCP42704 1394 aaKnown RBP16.02■□□□□ 0.16
NPIPB3-202ENST00000448012 NUTM2BA6NNL0 878 aaPredicted RBP16.02■□□□□ 0.16
NPIPB3-202ENST00000448012 NUTM2EB1AL46 878 aaPredicted RBP16.02■□□□□ 0.16
NPIPB3-202ENST00000448012 NUTM2AQ8IVF1 878 aaPredicted RBP16.02■□□□□ 0.16
NPIPB3-202ENST00000448012 TMEM132EQ6IEE7 984 aa16.01■□□□□ 0.15
NPIPB3-202ENST00000448012 PIK3C2GO75747 1445 aa16.01■□□□□ 0.15
NPIPB3-202ENST00000448012 COL16A1Q07092 1604 aaPredicted RBP16.01■□□□□ 0.15
NPIPB3-202ENST00000448012 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
NPIPB3-202ENST00000448012 ABCC11Q96J66 1382 aa16■□□□□ 0.15
NPIPB3-202ENST00000448012 C1orf167Q5SNV9 1468 aa16■□□□□ 0.15
NPIPB3-202ENST00000448012 STAC3Q96MF2 364 aa16■□□□□ 0.15
NPIPB3-202ENST00000448012 ZNF772Q68DY9 489 aaPredicted RBP15.99■□□□□ 0.15
NPIPB3-202ENST00000448012 C14orf93Q9H972 538 aaKnown RBP15.99■□□□□ 0.15
NPIPB3-202ENST00000448012 RGS17Q9UGC6 210 aaPredicted RBP15.99■□□□□ 0.15
NPIPB3-202ENST00000448012 ESCO1Q5FWF5 840 aa15.98■□□□□ 0.15
NPIPB3-202ENST00000448012 NALCNQ8IZF0 1738 aa15.98■□□□□ 0.15
NPIPB3-202ENST00000448012 MYOM2P54296 1465 aa15.97■□□□□ 0.15
NPIPB3-202ENST00000448012 SETD1AO15047 1707 aaKnown RBP15.97■□□□□ 0.15
NPIPB3-202ENST00000448012 TECPR2O15040 1411 aa15.97■□□□□ 0.15
NPIPB3-202ENST00000448012 YTHDC2Q9H6S0 1430 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms