RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 KCNV2Q8TDN2 545 aa6.68□□□□□ -1.34
PTPN12-208ENST00000447995 ARHGEF1Q92888 912 aaKnown RBP6.67□□□□□ -1.34
PTPN12-208ENST00000447995 TRAF7Q6Q0C0 670 aa6.66□□□□□ -1.34
PTPN12-208ENST00000447995 ZPR1O75312 459 aa6.65□□□□□ -1.34
PTPN12-208ENST00000447995 DNAJB2P25686 324 aa6.65□□□□□ -1.34
PTPN12-208ENST00000447995 PTGDRQ13258 359 aa6.65□□□□□ -1.34
PTPN12-208ENST00000447995 TSHZ2Q9NRE2 1034 aa6.65□□□□□ -1.34
PTPN12-208ENST00000447995 TLL1O43897 1013 aa6.64□□□□□ -1.35
PTPN12-208ENST00000447995 PCDHB3Q9Y5E6 796 aa6.64□□□□□ -1.35
PTPN12-208ENST00000447995 ADGRG1Q9Y653 693 aa6.64□□□□□ -1.35
PTPN12-208ENST00000447995 GGCXP38435 758 aa6.63□□□□□ -1.35
PTPN12-208ENST00000447995 SLC4A3P48751 1232 aa6.63□□□□□ -1.35
PTPN12-208ENST00000447995 BLOC1S3Q6QNY0 202 aa6.63□□□□□ -1.35
PTPN12-208ENST00000447995 EMID1Q96A84 441 aaPredicted RBP6.63□□□□□ -1.35
PTPN12-208ENST00000447995 TMUB1Q9BVT8 246 aa6.63□□□□□ -1.35
PTPN12-208ENST00000447995 PRR14Q9BWN1 585 aa6.63□□□□□ -1.35
PTPN12-208ENST00000447995 TMEM134Q9H6X4 195 aa6.63□□□□□ -1.35
PTPN12-208ENST00000447995 PDZRN3Q9UPQ7 1066 aa6.62□□□□□ -1.35
PTPN12-208ENST00000447995 RBM46Q8TBY0 533 aaKnown RBP6.61□□□□□ -1.35
PTPN12-208ENST00000447995 RCCD1A6NED2 376 aa6.6□□□□□ -1.35
PTPN12-208ENST00000447995 RNF223E7ERA6 249 aa6.6□□□□□ -1.35
PTPN12-208ENST00000447995 CFHP08603 1231 aa6.6□□□□□ -1.35
PTPN12-208ENST00000447995 FAM161AQ3B820 660 aa6.6□□□□□ -1.35
PTPN12-208ENST00000447995 BAZ1AQ9NRL2 1556 aaPredicted RBP6.6□□□□□ -1.35
PTPN12-208ENST00000447995 ACTN4O43707 911 aaKnown RBP6.59□□□□□ -1.35
PTPN12-208ENST00000447995 TRIM67Q6ZTA4 783 aa6.59□□□□□ -1.35
PTPN12-208ENST00000447995 MROH2BQ7Z745 1585 aa6.58□□□□□ -1.36
PTPN12-208ENST00000447995 KMT5BQ4FZB7 885 aa6.58□□□□□ -1.36
PTPN12-208ENST00000447995 CECR2Q9BXF3 1484 aa6.58□□□□□ -1.36
PTPN12-208ENST00000447995 S1PR4O95977 384 aa6.57□□□□□ -1.36
PTPN12-208ENST00000447995 SLC10A3P09131 477 aa6.57□□□□□ -1.36
PTPN12-208ENST00000447995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.56□□□□□ -1.36
PTPN12-208ENST00000447995 NUTM2FA1L443 756 aa6.56□□□□□ -1.36
PTPN12-208ENST00000447995 FCHSD2O94868 740 aa6.56□□□□□ -1.36
PTPN12-208ENST00000447995 SLC19A1P41440 591 aa6.56□□□□□ -1.36
PTPN12-208ENST00000447995 ANKLE1Q8NAG6 615 aa6.56□□□□□ -1.36
PTPN12-208ENST00000447995 PPEF1O14829 653 aaPredicted RBP6.55□□□□□ -1.36
PTPN12-208ENST00000447995 SEMA3EO15041 775 aa6.55□□□□□ -1.36
PTPN12-208ENST00000447995 ADH1BP00325 375 aa6.55□□□□□ -1.36
PTPN12-208ENST00000447995 SPRYD7Q5W111 196 aa6.55□□□□□ -1.36
PTPN12-208ENST00000447995 P3H3Q8IVL6 736 aa6.55□□□□□ -1.36
PTPN12-208ENST00000447995 PXYLP1Q8TE99 480 aa6.55□□□□□ -1.36
PTPN12-208ENST00000447995 PRR20EP86478 221 aa6.54□□□□□ -1.36
PTPN12-208ENST00000447995 PRR20CP86479 221 aa6.54□□□□□ -1.36
PTPN12-208ENST00000447995 PRR20DP86480 221 aa6.54□□□□□ -1.36
PTPN12-208ENST00000447995 PRR20BP86481 221 aa6.54□□□□□ -1.36
PTPN12-208ENST00000447995 PRR20AP86496 221 aa6.54□□□□□ -1.36
PTPN12-208ENST00000447995 LIAT1Q6ZQX7 453 aa6.54□□□□□ -1.36
PTPN12-208ENST00000447995 PLA2G2CQ5R387 149 aa6.53□□□□□ -1.36
PTPN12-208ENST00000447995 ZNF787Q6DD87 383 aa6.53□□□□□ -1.36
PTPN12-208ENST00000447995 ZNF598Q86UK7 904 aaKnown RBP6.53□□□□□ -1.36
PTPN12-208ENST00000447995 WIZO95785 1651 aa6.52□□□□□ -1.37
PTPN12-208ENST00000447995 NR1I2O75469 434 aa6.52□□□□□ -1.37
PTPN12-208ENST00000447995 ZNF697Q5TEC3 545 aa6.52□□□□□ -1.37
PTPN12-208ENST00000447995 METTL3Q86U44 580 aaKnown RBP6.52□□□□□ -1.37
PTPN12-208ENST00000447995 SMARCA4P51532 1647 aa6.51□□□□□ -1.37
PTPN12-208ENST00000447995 GPR37O15354 613 aa6.51□□□□□ -1.37
PTPN12-208ENST00000447995 HIC1Q14526 733 aa6.51□□□□□ -1.37
PTPN12-208ENST00000447995 TOP2AP11388 1531 aaKnown RBP6.5□□□□□ -1.37
PTPN12-208ENST00000447995 UNC13AQ9UPW8 1703 aa6.5□□□□□ -1.37
PTPN12-208ENST00000447995 GDF9O60383 454 aa6.5□□□□□ -1.37
PTPN12-208ENST00000447995 DGAT1O75907 488 aa6.5□□□□□ -1.37
PTPN12-208ENST00000447995 MYT1Q01538 1121 aa6.5□□□□□ -1.37
PTPN12-208ENST00000447995 SLC6A16Q9GZN6 736 aa6.5□□□□□ -1.37
PTPN12-208ENST00000447995 TESPA1A2RU30 521 aaPredicted RBP6.49□□□□□ -1.37
PTPN12-208ENST00000447995 OATP04181 439 aa6.49□□□□□ -1.37
PTPN12-208ENST00000447995 PUS10Q3MIT2 529 aaKnown RBP6.49□□□□□ -1.37
PTPN12-208ENST00000447995 PKDCCQ504Y2 493 aa6.49□□□□□ -1.37
PTPN12-208ENST00000447995 FAM187AA6NFU0 413 aa6.48□□□□□ -1.37
PTPN12-208ENST00000447995 TNFRSF10AO00220 468 aa6.48□□□□□ -1.37
PTPN12-208ENST00000447995 RBM26Q5T8P6 1007 aaKnown RBP6.48□□□□□ -1.37
PTPN12-208ENST00000447995 FECHP22830 423 aa6.47□□□□□ -1.37
PTPN12-208ENST00000447995 SCUBE3Q8IX30 993 aa6.47□□□□□ -1.37
PTPN12-208ENST00000447995 ZNF775Q96BV0 537 aaPredicted RBP6.47□□□□□ -1.37
PTPN12-208ENST00000447995 GNPATO15228 680 aa6.46□□□□□ -1.38
PTPN12-208ENST00000447995 MORN1Q5T089 497 aa6.46□□□□□ -1.38
PTPN12-208ENST00000447995 BICRAQ9NZM4 1560 aa6.46□□□□□ -1.38
PTPN12-208ENST00000447995 LOC105371045A0A1W2PR82 267 aa6.45□□□□□ -1.38
PTPN12-208ENST00000447995 NLRP7Q8WX94 980 aa6.45□□□□□ -1.38
PTPN12-208ENST00000447995 THAP11Q96EK4 314 aa6.45□□□□□ -1.38
PTPN12-208ENST00000447995 SPSB2Q99619 263 aa6.45□□□□□ -1.38
PTPN12-208ENST00000447995 PKD2L1Q9P0L9 805 aa6.45□□□□□ -1.38
PTPN12-208ENST00000447995 POTECB2RU33 542 aa6.44□□□□□ -1.38
PTPN12-208ENST00000447995 PLCB2Q00722 1185 aa6.44□□□□□ -1.38
PTPN12-208ENST00000447995 FUT2Q10981 343 aa6.44□□□□□ -1.38
PTPN12-208ENST00000447995 RDH13Q8NBN7 331 aa6.44□□□□□ -1.38
PTPN12-208ENST00000447995 DAXXQ9UER7 740 aaPredicted RBP6.44□□□□□ -1.38
PTPN12-208ENST00000447995 EIF4G1Q04637 1599 aaKnown RBP6.44□□□□□ -1.38
PTPN12-208ENST00000447995 PEG3Q9GZU2 1588 aa6.44□□□□□ -1.38
PTPN12-208ENST00000447995 ST8SIA5O15466 376 aa6.43□□□□□ -1.38
PTPN12-208ENST00000447995 RSPH4AQ5TD94 716 aa6.43□□□□□ -1.38
PTPN12-208ENST00000447995 LMOD2Q6P5Q4 547 aa6.43□□□□□ -1.38
PTPN12-208ENST00000447995 PHOX2BQ99453 314 aa6.43□□□□□ -1.38
PTPN12-208ENST00000447995 PRDM9Q9NQV7 894 aa6.43□□□□□ -1.38
PTPN12-208ENST00000447995 FCF1Q9Y324 198 aaKnown RBP6.43□□□□□ -1.38
PTPN12-208ENST00000447995 SMARCA2P51531 1590 aa6.43□□□□□ -1.38
PTPN12-208ENST00000447995 CCDC88BA6NC98 1476 aa6.42□□□□□ -1.38
PTPN12-208ENST00000447995 DDX11L8A8MPP1 907 aa6.42□□□□□ -1.38
PTPN12-208ENST00000447995 RPIAP49247 311 aa6.42□□□□□ -1.38
PTPN12-208ENST00000447995 AAASQ9NRG9 546 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms