RNA–Protein interactions for RNA: ENST00000447782.1

CCDC138-204, Transcript of coiled-coil domain containing 138, humanhuman

TSL 3

Gene CCDC138, Length 539 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-204ENST00000447782 FAM135BQ49AJ0 1406 aa18.42■□□□□ 0.54
CCDC138-204ENST00000447782 SETD5Q9C0A6 1442 aa18.41■□□□□ 0.54
CCDC138-204ENST00000447782 KDM5AP29375 1690 aaKnown RBP18.41■□□□□ 0.54
CCDC138-204ENST00000447782 RPRD2Q5VT52 1461 aaKnown RBP18.4■□□□□ 0.54
CCDC138-204ENST00000447782 STAG3Q9UJ98 1225 aa18.4■□□□□ 0.54
CCDC138-204ENST00000447782 E9PCH4 1651 aa18.4■□□□□ 0.54
CCDC138-204ENST00000447782 SLC4A1APQ9BWU0 796 aaKnown RBP18.39■□□□□ 0.53
CCDC138-204ENST00000447782 NOS1P29475 1434 aa18.38■□□□□ 0.53
CCDC138-204ENST00000447782 RAB3GAP2Q9H2M9 1393 aa18.37■□□□□ 0.53
CCDC138-204ENST00000447782 KCNA6P17658 529 aa18.36■□□□□ 0.53
CCDC138-204ENST00000447782 IDI1Q13907 227 aa18.36■□□□□ 0.53
CCDC138-204ENST00000447782 RGS17Q9UGC6 210 aaPredicted RBP18.36■□□□□ 0.53
CCDC138-204ENST00000447782 PIK3C2BO00750 1634 aa18.35■□□□□ 0.53
CCDC138-204ENST00000447782 CHGAP10645 457 aaKnown RBP18.35■□□□□ 0.53
CCDC138-204ENST00000447782 XIRP1Q702N8 1843 aaKnown RBP18.34■□□□□ 0.53
CCDC138-204ENST00000447782 TMEM94Q12767 1356 aa18.33■□□□□ 0.53
CCDC138-204ENST00000447782 SLC52A1Q9NWF4 448 aa18.33■□□□□ 0.52
CCDC138-204ENST00000447782 NKTRP30414 1462 aaKnown RBP18.32■□□□□ 0.52
CCDC138-204ENST00000447782 MPHOSPH9Q99550 1183 aa18.31■□□□□ 0.52
CCDC138-204ENST00000447782 SPHKAPQ2M3C7 1700 aa18.29■□□□□ 0.52
CCDC138-204ENST00000447782 NWD1Q149M9 1564 aa18.29■□□□□ 0.52
CCDC138-204ENST00000447782 ADGRB3O60242 1522 aa18.28■□□□□ 0.52
CCDC138-204ENST00000447782 ACIN1Q9UKV3 1341 aaKnown RBP18.27■□□□□ 0.52
CCDC138-204ENST00000447782 TRIM26Q12899 539 aaPredicted RBP18.26■□□□□ 0.51
CCDC138-204ENST00000447782 PROSER2Q86WR7 435 aaPredicted RBP18.25■□□□□ 0.51
CCDC138-204ENST00000447782 SLC26A8Q96RN1 970 aa18.25■□□□□ 0.51
CCDC138-204ENST00000447782 ZFYVE9O95405 1425 aa18.23■□□□□ 0.51
CCDC138-204ENST00000447782 NCOA3Q9Y6Q9 1424 aa18.23■□□□□ 0.51
CCDC138-204ENST00000447782 TRPM2O94759 1503 aa18.23■□□□□ 0.51
CCDC138-204ENST00000447782 PLEKHG1Q9ULL1 1385 aa18.23■□□□□ 0.51
CCDC138-204ENST00000447782 MSH6P52701 1360 aa18.22■□□□□ 0.51
CCDC138-204ENST00000447782 ZNF326Q5BKZ1 582 aaKnown RBP18.22■□□□□ 0.51
CCDC138-204ENST00000447782 TMEM131LA2VDJ0 1609 aa18.22■□□□□ 0.51
CCDC138-204ENST00000447782 CLTCL1P53675 1640 aa18.22■□□□□ 0.51
CCDC138-204ENST00000447782 ROBO1Q9Y6N7 1651 aa18.22■□□□□ 0.51
CCDC138-204ENST00000447782 MYO5BQ9ULV0 1848 aa18.21■□□□□ 0.51
CCDC138-204ENST00000447782 PPP1R15AO75807 674 aaPredicted RBP18.21■□□□□ 0.51
CCDC138-204ENST00000447782 NUTM2DQ5VT03 806 aaPredicted RBP18.21■□□□□ 0.51
CCDC138-204ENST00000447782 POTEAQ6S8J7 498 aa18.21■□□□□ 0.51
CCDC138-204ENST00000447782 BCANQ96GW7 911 aa18.21■□□□□ 0.51
CCDC138-204ENST00000447782 HDGFP51858 240 aaKnown RBP18.2■□□□□ 0.5
CCDC138-204ENST00000447782 SLAIN2Q9P270 581 aa18.2■□□□□ 0.5
CCDC138-204ENST00000447782 HRCP23327 699 aa18.19■□□□□ 0.5
CCDC138-204ENST00000447782 RIMS2Q9UQ26 1411 aa18.19■□□□□ 0.5
CCDC138-204ENST00000447782 JCADQ9P266 1359 aa18.18■□□□□ 0.5
CCDC138-204ENST00000447782 TBX22Q9Y458 520 aa18.18■□□□□ 0.5
CCDC138-204ENST00000447782 CCDC144AA2RUR9 1427 aa18.17■□□□□ 0.5
CCDC138-204ENST00000447782 PIK3R4Q99570 1358 aa18.16■□□□□ 0.5
CCDC138-204ENST00000447782 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCDC138-204ENST00000447782 RBM33Q96EV2 1170 aaKnown RBP18.14■□□□□ 0.49
CCDC138-204ENST00000447782 KIF1BO60333 1816 aa18.14■□□□□ 0.49
CCDC138-204ENST00000447782 CHD2O14647 1828 aaKnown RBP18.12■□□□□ 0.49
CCDC138-204ENST00000447782 RGL3Q3MIN7 710 aa18.11■□□□□ 0.49
CCDC138-204ENST00000447782 SPATA31A6Q5VVP1 1343 aa18.11■□□□□ 0.49
CCDC138-204ENST00000447782 ADAMTS13Q76LX8 1427 aa18.11■□□□□ 0.49
CCDC138-204ENST00000447782 DIP2AQ14689 1571 aa18.11■□□□□ 0.49
CCDC138-204ENST00000447782 COL16A1Q07092 1604 aaPredicted RBP18.09■□□□□ 0.49
CCDC138-204ENST00000447782 PHLPP1O60346 1717 aa18.09■□□□□ 0.49
CCDC138-204ENST00000447782 CADPS2Q86UW7 1296 aa18.08■□□□□ 0.48
CCDC138-204ENST00000447782 C19orf44Q9H6X5 657 aa18.08■□□□□ 0.48
CCDC138-204ENST00000447782 PCGF6Q9BYE7 350 aa18.07■□□□□ 0.48
CCDC138-204ENST00000447782 AHDC1Q5TGY3 1603 aaPredicted RBP18.07■□□□□ 0.48
CCDC138-204ENST00000447782 NEXMIFQ5QGS0 1516 aa18.07■□□□□ 0.48
CCDC138-204ENST00000447782 ANKRD30BQ9BXX2 1392 aa18.06■□□□□ 0.48
CCDC138-204ENST00000447782 DCCP43146 1447 aa18.05■□□□□ 0.48
CCDC138-204ENST00000447782 ZNF772Q68DY9 489 aaPredicted RBP18.04■□□□□ 0.48
CCDC138-204ENST00000447782 LRP6O75581 1613 aa18.03■□□□□ 0.48
CCDC138-204ENST00000447782 SPATA31E1Q6ZUB1 1445 aa18.03■□□□□ 0.48
CCDC138-204ENST00000447782 RPGRIP1LQ68CZ1 1315 aa18.02■□□□□ 0.48
CCDC138-204ENST00000447782 VGFO15240 615 aaPredicted RBP18.02■□□□□ 0.48
CCDC138-204ENST00000447782 ATF3P18847 181 aa18.02■□□□□ 0.48
CCDC138-204ENST00000447782 SIPA1L2Q9P2F8 1722 aaPredicted RBP18■□□□□ 0.47
CCDC138-204ENST00000447782 SHPRHQ149N8 1683 aa17.99■□□□□ 0.47
CCDC138-204ENST00000447782 BRINP3Q76B58 766 aa17.99■□□□□ 0.47
CCDC138-204ENST00000447782 C14orf37Q86TY3 774 aa17.99■□□□□ 0.47
CCDC138-204ENST00000447782 AMOTL2Q9Y2J4 779 aa17.99■□□□□ 0.47
CCDC138-204ENST00000447782 PPLO60437 1756 aa17.99■□□□□ 0.47
CCDC138-204ENST00000447782 PTPRUQ92729 1446 aa17.98■□□□□ 0.47
CCDC138-204ENST00000447782 DHX57Q6P158 1386 aaKnown RBP17.98■□□□□ 0.47
CCDC138-204ENST00000447782 CDK12Q9NYV4 1490 aaPredicted RBP17.98■□□□□ 0.47
CCDC138-204ENST00000447782 SETBP1Q9Y6X0 1596 aa17.97■□□□□ 0.47
CCDC138-204ENST00000447782 NRXN3Q9Y4C0 1643 aa17.97■□□□□ 0.47
CCDC138-204ENST00000447782 ADGRF5Q8IZF2 1346 aa17.97■□□□□ 0.47
CCDC138-204ENST00000447782 UPF1Q92900 1129 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCDC138-204ENST00000447782 KDM2AQ9Y2K7 1162 aa17.95■□□□□ 0.46
CCDC138-204ENST00000447782 NEUROD1Q13562 356 aa17.94■□□□□ 0.46
CCDC138-204ENST00000447782 MEX3CQ5U5Q3 659 aaKnown RBP17.94■□□□□ 0.46
CCDC138-204ENST00000447782 SETD1AO15047 1707 aaKnown RBP17.94■□□□□ 0.46
CCDC138-204ENST00000447782 XRN1Q8IZH2 1706 aaKnown RBP17.94■□□□□ 0.46
CCDC138-204ENST00000447782 METP08581 1390 aa17.93■□□□□ 0.46
CCDC138-204ENST00000447782 IFT172Q9UG01 1749 aa17.93■□□□□ 0.46
CCDC138-204ENST00000447782 DCAF11Q8TEB1 546 aa17.93■□□□□ 0.46
CCDC138-204ENST00000447782 SIN3AQ96ST3 1273 aa17.93■□□□□ 0.46
CCDC138-204ENST00000447782 ASXL1Q8IXJ9 1541 aa17.93■□□□□ 0.46
CCDC138-204ENST00000447782 MST1RQ04912 1400 aa17.92■□□□□ 0.46
CCDC138-204ENST00000447782 RXRBP28702 533 aa17.92■□□□□ 0.46
CCDC138-204ENST00000447782 LRRC59Q96AG4 307 aaKnown RBP17.9■□□□□ 0.46
CCDC138-204ENST00000447782 ADGRL3Q9HAR2 1447 aa17.89■□□□□ 0.45
CCDC138-204ENST00000447782 MYOM2P54296 1465 aa17.88■□□□□ 0.45
CCDC138-204ENST00000447782 PIK3C2GO75747 1445 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms