RNA–Protein interactions for RNA: ENST00000446204.6

VPS8-210, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 4,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-210ENST00000446204 PLCB2Q00722 1185 aa10□□□□□ -0.81
VPS8-210ENST00000446204 SNAPC4Q5SXM2 1469 aa10□□□□□ -0.81
VPS8-210ENST00000446204 OS9Q13438 667 aaPredicted RBP10□□□□□ -0.81
VPS8-210ENST00000446204 FOXD4L1Q9NU39 408 aa10□□□□□ -0.81
VPS8-210ENST00000446204 CHMP5Q9NZZ3 219 aa10□□□□□ -0.81
VPS8-210ENST00000446204 ANKRD45Q5TZF3 282 aa10□□□□□ -0.81
VPS8-210ENST00000446204 THOC2Q8NI27 1593 aaKnown RBP10□□□□□ -0.81
VPS8-210ENST00000446204 UGGT2Q9NYU1 1516 aa9.99□□□□□ -0.81
VPS8-210ENST00000446204 LAMC3Q9Y6N6 1575 aa9.99□□□□□ -0.81
VPS8-210ENST00000446204 CFAP70Q5T0N1 1121 aa9.99□□□□□ -0.81
VPS8-210ENST00000446204 BCAR3O75815 825 aa9.99□□□□□ -0.81
VPS8-210ENST00000446204 PLEKHG5O94827 1062 aa9.99□□□□□ -0.81
VPS8-210ENST00000446204 TCP11L2Q8N4U5 519 aa9.99□□□□□ -0.81
VPS8-210ENST00000446204 CFAP43Q8NDM7 1665 aa9.98□□□□□ -0.81
VPS8-210ENST00000446204 MLECQ14165 292 aa9.98□□□□□ -0.81
VPS8-210ENST00000446204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.98□□□□□ -0.81
VPS8-210ENST00000446204 HMMRO75330 724 aa9.98□□□□□ -0.81
VPS8-210ENST00000446204 URB2Q14146 1524 aaKnown RBP9.98□□□□□ -0.81
VPS8-210ENST00000446204 FRAT2O75474 233 aaPredicted RBP9.98□□□□□ -0.81
VPS8-210ENST00000446204 AFAP1Q8N556 730 aa9.98□□□□□ -0.81
VPS8-210ENST00000446204 KCNJ4P48050 445 aa9.97□□□□□ -0.81
VPS8-210ENST00000446204 SKOR2Q2VWA4 1001 aaPredicted RBP9.97□□□□□ -0.81
VPS8-210ENST00000446204 C22orf23Q9BZE7 217 aa9.97□□□□□ -0.81
VPS8-210ENST00000446204 MTHFSP49914 203 aa9.97□□□□□ -0.81
VPS8-210ENST00000446204 RIPK4P57078 832 aa9.97□□□□□ -0.81
VPS8-210ENST00000446204 ELL2O00472 640 aaPredicted RBP9.97□□□□□ -0.81
VPS8-210ENST00000446204 DIAPH1O60610 1272 aaKnown RBP9.97□□□□□ -0.81
VPS8-210ENST00000446204 PLEKHH2Q8IVE3 1493 aa9.96□□□□□ -0.81
VPS8-210ENST00000446204 SCAPERQ9BY12 1400 aa9.96□□□□□ -0.81
VPS8-210ENST00000446204 KIF16BQ96L93 1317 aa9.96□□□□□ -0.81
VPS8-210ENST00000446204 ST18O60284 1047 aa9.96□□□□□ -0.82
VPS8-210ENST00000446204 SLFN5Q08AF3 891 aa9.96□□□□□ -0.82
VPS8-210ENST00000446204 IL27Q8NEV9 243 aa9.96□□□□□ -0.82
VPS8-210ENST00000446204 STK31Q9BXU1 1019 aa9.95□□□□□ -0.82
VPS8-210ENST00000446204 BRPF3Q9ULD4 1205 aa9.95□□□□□ -0.82
VPS8-210ENST00000446204 PDZRN3Q9UPQ7 1066 aa9.95□□□□□ -0.82
VPS8-210ENST00000446204 NINLQ9Y2I6 1382 aa9.95□□□□□ -0.82
VPS8-210ENST00000446204 PLB1Q6P1J6 1458 aa9.95□□□□□ -0.82
VPS8-210ENST00000446204 MINK1Q8N4C8 1332 aaPredicted RBP9.95□□□□□ -0.82
VPS8-210ENST00000446204 ZRSR1Q15695 479 aaKnown RBP9.95□□□□□ -0.82
VPS8-210ENST00000446204 SYAP1Q96A49 352 aaPredicted RBP9.95□□□□□ -0.82
VPS8-210ENST00000446204 MAGI1Q96QZ7 1491 aaPredicted RBP9.95□□□□□ -0.82
VPS8-210ENST00000446204 KIAA1211Q6ZU35 1233 aa9.94□□□□□ -0.82
VPS8-210ENST00000446204 DDX49Q9Y6V7 483 aaKnown RBP9.94□□□□□ -0.82
VPS8-210ENST00000446204 TCOF1Q13428 1488 aaKnown RBP9.94□□□□□ -0.82
VPS8-210ENST00000446204 C20orf194Q5TEA3 1177 aa9.94□□□□□ -0.82
VPS8-210ENST00000446204 ARHGEF11O15085 1522 aa9.94□□□□□ -0.82
VPS8-210ENST00000446204 GOLGA6L4A6NEF3 574 aa9.94□□□□□ -0.82
VPS8-210ENST00000446204 CCDC141Q6ZP82 1450 aa9.94□□□□□ -0.82
VPS8-210ENST00000446204 SLC4A10Q6U841 1118 aa9.94□□□□□ -0.82
VPS8-210ENST00000446204 LNPKQ9C0E8 428 aa9.94□□□□□ -0.82
VPS8-210ENST00000446204 TMEM132EQ6IEE7 984 aa9.93□□□□□ -0.82
VPS8-210ENST00000446204 TRIM6-TRIM34B2RNG4 842 aa9.92□□□□□ -0.82
VPS8-210ENST00000446204 WDR63Q8IWG1 891 aa9.92□□□□□ -0.82
VPS8-210ENST00000446204 API5Q9BZZ5 524 aaKnown RBP9.92□□□□□ -0.82
VPS8-210ENST00000446204 GGNBP2Q9H3C7 697 aa9.92□□□□□ -0.82
VPS8-210ENST00000446204 FGD1P98174 961 aa9.92□□□□□ -0.82
VPS8-210ENST00000446204 SKAP1Q86WV1 359 aa9.92□□□□□ -0.82
VPS8-210ENST00000446204 SLC12A5Q9H2X9 1139 aa9.92□□□□□ -0.82
VPS8-210ENST00000446204 CHAF1AQ13111 956 aaPredicted RBP9.92□□□□□ -0.82
VPS8-210ENST00000446204 DNAJC5BQ9UF47 199 aa9.91□□□□□ -0.82
VPS8-210ENST00000446204 KIAA2012Q0VF49 1180 aa9.91□□□□□ -0.82
VPS8-210ENST00000446204 CABP2Q9NPB3 220 aa9.91□□□□□ -0.82
VPS8-210ENST00000446204 COG3Q96JB2 828 aa9.91□□□□□ -0.82
VPS8-210ENST00000446204 GPATCH8Q9UKJ3 1502 aaKnown RBP9.9□□□□□ -0.82
VPS8-210ENST00000446204 GRIN2AQ12879 1464 aa9.9□□□□□ -0.82
VPS8-210ENST00000446204 RALGAPBQ86X10 1494 aa9.9□□□□□ -0.82
VPS8-210ENST00000446204 EXOSC9Q06265 439 aaKnown RBP9.9□□□□□ -0.82
VPS8-210ENST00000446204 DUSP27Q5VZP5 1158 aa9.9□□□□□ -0.82
VPS8-210ENST00000446204 CTTNBP2Q8WZ74 1663 aa9.9□□□□□ -0.82
VPS8-210ENST00000446204 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
VPS8-210ENST00000446204 GNAI1P63096 354 aa9.9□□□□□ -0.83
VPS8-210ENST00000446204 LMOD2Q6P5Q4 547 aa9.9□□□□□ -0.83
VPS8-210ENST00000446204 CHMP4AQ9BY43 222 aa9.89□□□□□ -0.83
VPS8-210ENST00000446204 CT47B1P0C2W7 299 aaPredicted RBP9.89□□□□□ -0.83
VPS8-210ENST00000446204 MRE11P49959 708 aa9.89□□□□□ -0.83
VPS8-210ENST00000446204 TRAK2O60296 914 aa9.89□□□□□ -0.83
VPS8-210ENST00000446204 REC8O95072 547 aa9.89□□□□□ -0.83
VPS8-210ENST00000446204 HSP90AA2PQ14568 343 aaPredicted RBP9.89□□□□□ -0.83
VPS8-210ENST00000446204 NOL8Q76FK4 1167 aaKnown RBP9.88□□□□□ -0.83
VPS8-210ENST00000446204 KIF14Q15058 1648 aa9.88□□□□□ -0.83
VPS8-210ENST00000446204 MVPQ14764 893 aaKnown RBP9.88□□□□□ -0.83
VPS8-210ENST00000446204 DHX29Q7Z478 1369 aaKnown RBP9.88□□□□□ -0.83
VPS8-210ENST00000446204 FOXD4L5Q5VV16 416 aaPredicted RBP9.88□□□□□ -0.83
VPS8-210ENST00000446204 FOXD4L4Q8WXT5 416 aaPredicted RBP9.88□□□□□ -0.83
VPS8-210ENST00000446204 TSR2Q969E8 191 aaKnown RBP9.88□□□□□ -0.83
VPS8-210ENST00000446204 DISP3Q9P2K9 1392 aa9.87□□□□□ -0.83
VPS8-210ENST00000446204 GOLGA6L6A8MZA4 724 aa9.87□□□□□ -0.83
VPS8-210ENST00000446204 NKTRP30414 1462 aaKnown RBP9.87□□□□□ -0.83
VPS8-210ENST00000446204 PHF14O94880 888 aa9.87□□□□□ -0.83
VPS8-210ENST00000446204 HMOX1P09601 288 aa9.87□□□□□ -0.83
VPS8-210ENST00000446204 NUCB2P80303 420 aa9.87□□□□□ -0.83
VPS8-210ENST00000446204 DRC7Q8IY82 874 aa9.87□□□□□ -0.83
VPS8-210ENST00000446204 FAM43AQ8N2R8 423 aa9.87□□□□□ -0.83
VPS8-210ENST00000446204 PARD3Q8TEW0 1356 aa9.86□□□□□ -0.83
VPS8-210ENST00000446204 AMPHP49418 695 aa9.86□□□□□ -0.83
VPS8-210ENST00000446204 NOB1Q9ULX3 412 aaKnown RBP9.86□□□□□ -0.83
VPS8-210ENST00000446204 INTS3Q68E01 1043 aaKnown RBP9.86□□□□□ -0.83
VPS8-210ENST00000446204 LRPPRCP42704 1394 aaKnown RBP9.86□□□□□ -0.83
VPS8-210ENST00000446204 CDC45O75419 566 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms