RNA–Protein interactions for RNA: ENST00000444118.5

CCDC197-202, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-202ENST00000444118 TESK2Q96S53 571 aa23.78■■□□□ 1.4
CCDC197-202ENST00000444118 SYNMO15061 1565 aa23.77■■□□□ 1.4
CCDC197-202ENST00000444118 SCAF11Q99590 1463 aaKnown RBP23.77■■□□□ 1.4
CCDC197-202ENST00000444118 WASHC2CQ9Y4E1 1318 aa23.76■■□□□ 1.39
CCDC197-202ENST00000444118 AGLP35573 1532 aa23.73■■□□□ 1.39
CCDC197-202ENST00000444118 DISP3Q9P2K9 1392 aa23.73■■□□□ 1.39
CCDC197-202ENST00000444118 POLR3GLQ9BT43 218 aa23.72■■□□□ 1.39
CCDC197-202ENST00000444118 PREX1Q8TCU6 1659 aa23.72■■□□□ 1.39
CCDC197-202ENST00000444118 SETBP1Q9Y6X0 1596 aa23.71■■□□□ 1.39
CCDC197-202ENST00000444118 CCDC184Q52MB2 194 aa23.7■■□□□ 1.38
CCDC197-202ENST00000444118 KTN1Q86UP2 1357 aaKnown RBP23.69■■□□□ 1.38
CCDC197-202ENST00000444118 MYO3AQ8NEV4 1616 aa23.69■■□□□ 1.38
CCDC197-202ENST00000444118 ARHGEF40Q8TER5 1519 aa23.67■■□□□ 1.38
CCDC197-202ENST00000444118 ADGRF5Q8IZF2 1346 aa23.66■■□□□ 1.38
CCDC197-202ENST00000444118 EIF3AQ14152 1382 aaKnown RBP23.66■■□□□ 1.38
CCDC197-202ENST00000444118 PIK3C2GO75747 1445 aa23.66■■□□□ 1.38
CCDC197-202ENST00000444118 TMF1P82094 1093 aa23.65■■□□□ 1.38
CCDC197-202ENST00000444118 MRS2Q9HD23 443 aa23.65■■□□□ 1.38
CCDC197-202ENST00000444118 NEXMIFQ5QGS0 1516 aa23.63■■□□□ 1.37
CCDC197-202ENST00000444118 RPGRIP1LQ68CZ1 1315 aa23.63■■□□□ 1.37
CCDC197-202ENST00000444118 MYO5BQ9ULV0 1848 aa23.62■■□□□ 1.37
CCDC197-202ENST00000444118 MYOM1P52179 1685 aa23.62■■□□□ 1.37
CCDC197-202ENST00000444118 KDM5AP29375 1690 aaKnown RBP23.61■■□□□ 1.37
CCDC197-202ENST00000444118 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
CCDC197-202ENST00000444118 TMEM131LA2VDJ0 1609 aa23.59■■□□□ 1.37
CCDC197-202ENST00000444118 PER1O15534 1290 aaPredicted RBP23.59■■□□□ 1.37
CCDC197-202ENST00000444118 HNRNPUQ00839 825 aaKnown RBP eCLIP23.58■■□□□ 1.37
CCDC197-202ENST00000444118 CFAP70Q5T0N1 1121 aa23.58■■□□□ 1.37
CCDC197-202ENST00000444118 PARD3Q8TEW0 1356 aa23.57■■□□□ 1.36
CCDC197-202ENST00000444118 CLTCQ00610 1675 aaKnown RBP23.57■■□□□ 1.36
CCDC197-202ENST00000444118 RALBP1Q15311 655 aa23.57■■□□□ 1.36
CCDC197-202ENST00000444118 PPP6R1Q9UPN7 881 aa23.57■■□□□ 1.36
CCDC197-202ENST00000444118 SBNO2Q9Y2G9 1366 aa23.56■■□□□ 1.36
CCDC197-202ENST00000444118 SLC52A1Q9NWF4 448 aa23.55■■□□□ 1.36
CCDC197-202ENST00000444118 ERVK-7P63135 1459 aa23.55■■□□□ 1.36
CCDC197-202ENST00000444118 ZFYVE9O95405 1425 aa23.54■■□□□ 1.36
CCDC197-202ENST00000444118 CHGAP10645 457 aaKnown RBP23.53■■□□□ 1.36
CCDC197-202ENST00000444118 CDCA8Q53HL2 280 aa23.53■■□□□ 1.36
CCDC197-202ENST00000444118 MYBBP1AQ9BQG0 1328 aaKnown RBP23.53■■□□□ 1.36
CCDC197-202ENST00000444118 BRD4O60885 1362 aaPredicted RBP23.53■■□□□ 1.36
CCDC197-202ENST00000444118 SLC24A1O60721 1099 aa23.53■■□□□ 1.36
CCDC197-202ENST00000444118 C14orf93Q9H972 538 aaKnown RBP23.52■■□□□ 1.36
CCDC197-202ENST00000444118 QRICH2Q9H0J4 1663 aa23.51■■□□□ 1.35
CCDC197-202ENST00000444118 FAM9BQ8IZU0 186 aa23.51■■□□□ 1.35
CCDC197-202ENST00000444118 SPATA31D1Q6ZQQ2 1576 aa23.51■■□□□ 1.35
CCDC197-202ENST00000444118 IDI1Q13907 227 aa23.49■■□□□ 1.35
CCDC197-202ENST00000444118 ARHGEF28Q8N1W1 1705 aaKnown RBP23.49■■□□□ 1.35
CCDC197-202ENST00000444118 ZBED9Q6R2W3 1325 aa23.49■■□□□ 1.35
CCDC197-202ENST00000444118 PANK3Q9H999 370 aa23.48■■□□□ 1.35
CCDC197-202ENST00000444118 SUPT16HQ9Y5B9 1047 aaKnown RBP23.47■■□□□ 1.35
CCDC197-202ENST00000444118 LRPPRCP42704 1394 aaKnown RBP23.46■■□□□ 1.35
CCDC197-202ENST00000444118 VGFO15240 615 aaPredicted RBP23.45■■□□□ 1.35
CCDC197-202ENST00000444118 PNISRQ8TF01 805 aaKnown RBP23.45■■□□□ 1.34
CCDC197-202ENST00000444118 CNGB1Q14028 1251 aaPredicted RBP23.43■■□□□ 1.34
CCDC197-202ENST00000444118 NLRP13Q86W25 1043 aa23.43■■□□□ 1.34
CCDC197-202ENST00000444118 TMC1Q8TDI8 760 aa23.42■■□□□ 1.34
CCDC197-202ENST00000444118 ASXL1Q8IXJ9 1541 aa23.41■■□□□ 1.34
CCDC197-202ENST00000444118 CENPJQ9HC77 1338 aaPredicted RBP23.4■■□□□ 1.34
CCDC197-202ENST00000444118 NPC1L1Q9UHC9 1359 aa23.39■■□□□ 1.34
CCDC197-202ENST00000444118 FBXO31Q5XUX0 539 aaPredicted RBP23.38■■□□□ 1.33
CCDC197-202ENST00000444118 A2ML1A8K2U0 1454 aa23.34■■□□□ 1.33
CCDC197-202ENST00000444118 AMER1Q5JTC6 1135 aaPredicted RBP23.34■■□□□ 1.33
CCDC197-202ENST00000444118 INSRP06213 1382 aa23.33■■□□□ 1.33
CCDC197-202ENST00000444118 CC2D1BQ5T0F9 858 aaKnown RBP23.33■■□□□ 1.32
CCDC197-202ENST00000444118 TMEM132EQ6IEE7 984 aa23.33■■□□□ 1.32
CCDC197-202ENST00000444118 TRAK1Q9UPV9 953 aa23.33■■□□□ 1.32
CCDC197-202ENST00000444118 KNSTRNQ9Y448 316 aa23.33■■□□□ 1.32
CCDC197-202ENST00000444118 SETD1AO15047 1707 aaKnown RBP23.32■■□□□ 1.32
CCDC197-202ENST00000444118 ALKQ9UM73 1620 aa23.31■■□□□ 1.32
CCDC197-202ENST00000444118 TULP4Q9NRJ4 1543 aa23.3■■□□□ 1.32
CCDC197-202ENST00000444118 NUTM2DQ5VT03 806 aaPredicted RBP23.3■■□□□ 1.32
CCDC197-202ENST00000444118 USP32Q8NFA0 1604 aa23.29■■□□□ 1.32
CCDC197-202ENST00000444118 NEFLP07196 543 aa23.27■■□□□ 1.32
CCDC197-202ENST00000444118 PTPRMP28827 1452 aa23.27■■□□□ 1.32
CCDC197-202ENST00000444118 ZMYM3Q14202 1370 aa23.27■■□□□ 1.32
CCDC197-202ENST00000444118 PUS7Q96PZ0 661 aaKnown RBP23.27■■□□□ 1.32
CCDC197-202ENST00000444118 MLECQ14165 292 aa23.26■■□□□ 1.31
CCDC197-202ENST00000444118 FKBP8Q14318 412 aa23.26■■□□□ 1.31
CCDC197-202ENST00000444118 SMG6Q86US8 1419 aaKnown RBP23.25■■□□□ 1.31
CCDC197-202ENST00000444118 BLMP54132 1417 aaPredicted RBP23.24■■□□□ 1.31
CCDC197-202ENST00000444118 YTHDC2Q9H6S0 1430 aaKnown RBP23.24■■□□□ 1.31
CCDC197-202ENST00000444118 NRXN3Q9Y4C0 1643 aa23.23■■□□□ 1.31
CCDC197-202ENST00000444118 RIMS2Q9UQ26 1411 aa23.22■■□□□ 1.31
CCDC197-202ENST00000444118 ADAMTSL3P82987 1691 aa23.22■■□□□ 1.31
CCDC197-202ENST00000444118 UBR1Q8IWV7 1749 aa23.22■■□□□ 1.31
CCDC197-202ENST00000444118 STAG3Q9UJ98 1225 aa23.21■■□□□ 1.31
CCDC197-202ENST00000444118 DLC1Q96QB1 1528 aa23.21■■□□□ 1.31
CCDC197-202ENST00000444118 KDM4FA0A1W2PPD8 638 aa23.2■■□□□ 1.3
CCDC197-202ENST00000444118 PPP2R1AP30153 589 aa23.2■■□□□ 1.3
CCDC197-202ENST00000444118 CARD14Q9BXL6 1004 aa23.2■■□□□ 1.3
CCDC197-202ENST00000444118 EVC2Q86UK5 1308 aa23.19■■□□□ 1.3
CCDC197-202ENST00000444118 ESF1Q9H501 851 aaKnown RBP23.19■■□□□ 1.3
CCDC197-202ENST00000444118 TNRQ92752 1358 aa23.17■■□□□ 1.3
CCDC197-202ENST00000444118 KNDC1Q76NI1 1749 aa23.15■■□□□ 1.3
CCDC197-202ENST00000444118 FER1L4A9Z1Z3 1794 aa23.15■■□□□ 1.3
CCDC197-202ENST00000444118 NUDCQ9Y266 331 aa23.15■■□□□ 1.3
CCDC197-202ENST00000444118 NINLQ9Y2I6 1382 aa23.15■■□□□ 1.3
CCDC197-202ENST00000444118 NSD3Q9BZ95 1437 aa23.15■■□□□ 1.3
CCDC197-202ENST00000444118 C3P01024 1663 aa23.14■■□□□ 1.29
CCDC197-202ENST00000444118 ANKRD36BQ8N2N9 1353 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms