RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 SPHKAPQ2M3C7 1700 aa19.52■□□□□ 0.72
SF1-210ENST00000443908 CFAP65Q6ZU64 1925 aaKnown RBP19.51■□□□□ 0.71
SF1-210ENST00000443908 LTKP29376 864 aa19.5■□□□□ 0.71
SF1-210ENST00000443908 ERVK-7P63135 1459 aa19.49■□□□□ 0.71
SF1-210ENST00000443908 SIN3AQ96ST3 1273 aa19.49■□□□□ 0.71
SF1-210ENST00000443908 CCDC144AA2RUR9 1427 aa19.47■□□□□ 0.71
SF1-210ENST00000443908 NOS1P29475 1434 aa19.46■□□□□ 0.71
SF1-210ENST00000443908 IQGAP1P46940 1657 aa19.45■□□□□ 0.7
SF1-210ENST00000443908 BCANQ96GW7 911 aa19.44■□□□□ 0.7
SF1-210ENST00000443908 LRRC7Q96NW7 1537 aa19.44■□□□□ 0.7
SF1-210ENST00000443908 TONSLQ96HA7 1378 aa19.44■□□□□ 0.7
SF1-210ENST00000443908 SCAF11Q99590 1463 aaKnown RBP19.43■□□□□ 0.7
SF1-210ENST00000443908 NEUROD1Q13562 356 aa19.43■□□□□ 0.7
SF1-210ENST00000443908 MED1Q15648 1581 aaPredicted RBP19.42■□□□□ 0.7
SF1-210ENST00000443908 IDI1Q13907 227 aa19.42■□□□□ 0.7
SF1-210ENST00000443908 CLTCL1P53675 1640 aa19.41■□□□□ 0.7
SF1-210ENST00000443908 SYNMO15061 1565 aa19.4■□□□□ 0.7
SF1-210ENST00000443908 PIK3C2BO00750 1634 aa19.4■□□□□ 0.7
SF1-210ENST00000443908 PROSER2Q86WR7 435 aaPredicted RBP19.38■□□□□ 0.69
SF1-210ENST00000443908 SLC26A8Q96RN1 970 aa19.38■□□□□ 0.69
SF1-210ENST00000443908 TMEM2Q9UHN6 1383 aa19.37■□□□□ 0.69
SF1-210ENST00000443908 SPATA31E1Q6ZUB1 1445 aa19.36■□□□□ 0.69
SF1-210ENST00000443908 RBM33Q96EV2 1170 aaKnown RBP19.36■□□□□ 0.69
SF1-210ENST00000443908 UBR1Q8IWV7 1749 aa19.36■□□□□ 0.69
SF1-210ENST00000443908 STRCP1A6NGW2 1772 aa19.35■□□□□ 0.69
SF1-210ENST00000443908 KCNA6P17658 529 aa19.35■□□□□ 0.69
SF1-210ENST00000443908 ALKQ9UM73 1620 aa19.34■□□□□ 0.69
SF1-210ENST00000443908 ADGRB3O60242 1522 aa19.34■□□□□ 0.69
SF1-210ENST00000443908 ARHGAP23Q9P227 1491 aa19.34■□□□□ 0.69
SF1-210ENST00000443908 SLC52A1Q9NWF4 448 aa19.33■□□□□ 0.68
SF1-210ENST00000443908 SLIT1O75093 1534 aa19.33■□□□□ 0.68
SF1-210ENST00000443908 L3MBTL2Q969R5 705 aa19.32■□□□□ 0.68
SF1-210ENST00000443908 KIF1BO60333 1816 aa19.32■□□□□ 0.68
SF1-210ENST00000443908 PPP1R15AO75807 674 aaPredicted RBP19.31■□□□□ 0.68
SF1-210ENST00000443908 TMEM94Q12767 1356 aa19.31■□□□□ 0.68
SF1-210ENST00000443908 HDGFP51858 240 aaKnown RBP19.3■□□□□ 0.68
SF1-210ENST00000443908 CHGAP10645 457 aaKnown RBP19.29■□□□□ 0.68
SF1-210ENST00000443908 STAC3Q96MF2 364 aa19.27■□□□□ 0.68
SF1-210ENST00000443908 RGS17Q9UGC6 210 aaPredicted RBP19.26■□□□□ 0.67
SF1-210ENST00000443908 FAM135BQ49AJ0 1406 aa19.25■□□□□ 0.67
SF1-210ENST00000443908 KDM5AP29375 1690 aaKnown RBP19.25■□□□□ 0.67
SF1-210ENST00000443908 TMEM131LA2VDJ0 1609 aa19.25■□□□□ 0.67
SF1-210ENST00000443908 MYOM2P54296 1465 aa19.23■□□□□ 0.67
SF1-210ENST00000443908 IFT172Q9UG01 1749 aa19.23■□□□□ 0.67
SF1-210ENST00000443908 C14orf37Q86TY3 774 aa19.23■□□□□ 0.67
SF1-210ENST00000443908 SLAIN2Q9P270 581 aa19.23■□□□□ 0.67
SF1-210ENST00000443908 RPGRIP1LQ68CZ1 1315 aa19.22■□□□□ 0.67
SF1-210ENST00000443908 NUTM2DQ5VT03 806 aaPredicted RBP19.21■□□□□ 0.67
SF1-210ENST00000443908 MSH6P52701 1360 aa19.2■□□□□ 0.66
SF1-210ENST00000443908 PRAG1Q86YV5 1406 aa19.19■□□□□ 0.66
SF1-210ENST00000443908 RGL3Q3MIN7 710 aa19.19■□□□□ 0.66
SF1-210ENST00000443908 DCAF11Q8TEB1 546 aa19.19■□□□□ 0.66
SF1-210ENST00000443908 POTEAQ6S8J7 498 aa19.18■□□□□ 0.66
SF1-210ENST00000443908 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.18■□□□□ 0.66
SF1-210ENST00000443908 NEXMIFQ5QGS0 1516 aa19.18■□□□□ 0.66
SF1-210ENST00000443908 PPLO60437 1756 aa19.18■□□□□ 0.66
SF1-210ENST00000443908 RALGAPBQ86X10 1494 aa19.17■□□□□ 0.66
SF1-210ENST00000443908 NRXN1Q9ULB1 1477 aa19.17■□□□□ 0.66
SF1-210ENST00000443908 XIRP1Q702N8 1843 aaKnown RBP19.16■□□□□ 0.66
SF1-210ENST00000443908 ZFYVE9O95405 1425 aa19.16■□□□□ 0.66
SF1-210ENST00000443908 NBPF8Q3BBV2 869 aa19.15■□□□□ 0.66
SF1-210ENST00000443908 TBX22Q9Y458 520 aa19.15■□□□□ 0.66
SF1-210ENST00000443908 RIMS2Q9UQ26 1411 aa19.15■□□□□ 0.66
SF1-210ENST00000443908 PLEKHG1Q9ULL1 1385 aa19.14■□□□□ 0.65
SF1-210ENST00000443908 TRPM1Q7Z4N2 1603 aa19.14■□□□□ 0.65
SF1-210ENST00000443908 MYO5BQ9ULV0 1848 aa19.14■□□□□ 0.65
SF1-210ENST00000443908 KIAA1210Q9ULL0 1709 aa19.12■□□□□ 0.65
SF1-210ENST00000443908 ZNF326Q5BKZ1 582 aaKnown RBP19.12■□□□□ 0.65
SF1-210ENST00000443908 KDM2AQ9Y2K7 1162 aa19.12■□□□□ 0.65
SF1-210ENST00000443908 ATF3P18847 181 aa19.11■□□□□ 0.65
SF1-210ENST00000443908 MEX3CQ5U5Q3 659 aaKnown RBP19.1■□□□□ 0.65
SF1-210ENST00000443908 ROBO1Q9Y6N7 1651 aa19.1■□□□□ 0.65
SF1-210ENST00000443908 LAMC1P11047 1609 aa19.1■□□□□ 0.65
SF1-210ENST00000443908 NKTRP30414 1462 aaKnown RBP19.09■□□□□ 0.65
SF1-210ENST00000443908 PIK3C2GO75747 1445 aa19.09■□□□□ 0.65
SF1-210ENST00000443908 GPRASP1Q5JY77 1395 aa19.09■□□□□ 0.65
SF1-210ENST00000443908 C19orf44Q9H6X5 657 aa19.09■□□□□ 0.65
SF1-210ENST00000443908 VGFO15240 615 aaPredicted RBP19.08■□□□□ 0.64
SF1-210ENST00000443908 CADPS2Q86UW7 1296 aa19.08■□□□□ 0.64
SF1-210ENST00000443908 JCADQ9P266 1359 aa19.07■□□□□ 0.64
SF1-210ENST00000443908 AMOTL2Q9Y2J4 779 aa19.07■□□□□ 0.64
SF1-210ENST00000443908 ADGRF5Q8IZF2 1346 aa19.06■□□□□ 0.64
SF1-210ENST00000443908 SETBP1Q9Y6X0 1596 aa19.04■□□□□ 0.64
SF1-210ENST00000443908 ROCK2O75116 1388 aaKnown RBP19.03■□□□□ 0.64
SF1-210ENST00000443908 NWD1Q149M9 1564 aa19.02■□□□□ 0.63
SF1-210ENST00000443908 NCOA3Q9Y6Q9 1424 aa19.01■□□□□ 0.63
SF1-210ENST00000443908 NUTM2BA6NNL0 878 aaPredicted RBP19.01■□□□□ 0.63
SF1-210ENST00000443908 NUTM2EB1AL46 878 aaPredicted RBP19.01■□□□□ 0.63
SF1-210ENST00000443908 NUTM2AQ8IVF1 878 aaPredicted RBP19.01■□□□□ 0.63
SF1-210ENST00000443908 PHLPP1O60346 1717 aa19■□□□□ 0.63
SF1-210ENST00000443908 CHD2O14647 1828 aaKnown RBP19■□□□□ 0.63
SF1-210ENST00000443908 ZNF772Q68DY9 489 aaPredicted RBP19■□□□□ 0.63
SF1-210ENST00000443908 SPATA31A6Q5VVP1 1343 aa19■□□□□ 0.63
SF1-210ENST00000443908 C14orf93Q9H972 538 aaKnown RBP18.99■□□□□ 0.63
SF1-210ENST00000443908 ADAMTS13Q76LX8 1427 aa18.99■□□□□ 0.63
SF1-210ENST00000443908 PIK3R4Q99570 1358 aa18.98■□□□□ 0.63
SF1-210ENST00000443908 EIF4G2P78344 907 aaKnown RBP eCLIP18.98■□□□□ 0.631e-7■■□□□ 12.5
SF1-210ENST00000443908 CARD11Q9BXL7 1154 aa18.98■□□□□ 0.63
SF1-210ENST00000443908 ADGRB1O14514 1584 aa18.98■□□□□ 0.63
SF1-210ENST00000443908 ZNF316A6NFI3 1004 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms