RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 SHROOM2Q13796 1616 aa20.21■□□□□ 0.83
AP1S3-206ENST00000443700 KNSTRNQ9Y448 316 aa20.21■□□□□ 0.83
AP1S3-206ENST00000443700 VIRMAQ69YN4 1812 aaKnown RBP20.2■□□□□ 0.82
AP1S3-206ENST00000443700 SCAPERQ9BY12 1400 aa20.2■□□□□ 0.82
AP1S3-206ENST00000443700 STAC3Q96MF2 364 aa20.2■□□□□ 0.82
AP1S3-206ENST00000443700 KDM5AP29375 1690 aaKnown RBP20.2■□□□□ 0.82
AP1S3-206ENST00000443700 NPC1L1Q9UHC9 1359 aa20.2■□□□□ 0.82
AP1S3-206ENST00000443700 SCAF11Q99590 1463 aaKnown RBP20.19■□□□□ 0.82
AP1S3-206ENST00000443700 ADAMTS8Q9UP79 889 aa20.18■□□□□ 0.82
AP1S3-206ENST00000443700 PPP2R1AP30153 589 aa20.18■□□□□ 0.82
AP1S3-206ENST00000443700 ZNF521Q96K83 1311 aa20.18■□□□□ 0.82
AP1S3-206ENST00000443700 GOLGA2Q08379 1002 aa20.17■□□□□ 0.82
AP1S3-206ENST00000443700 DUSP27Q5VZP5 1158 aa20.17■□□□□ 0.82
AP1S3-206ENST00000443700 PLEKHH1Q9ULM0 1364 aa20.17■□□□□ 0.82
AP1S3-206ENST00000443700 ABCC1P33527 1531 aa20.17■□□□□ 0.82
AP1S3-206ENST00000443700 FAM161AQ3B820 660 aa20.16■□□□□ 0.82
AP1S3-206ENST00000443700 DAXXQ9UER7 740 aaPredicted RBP20.16■□□□□ 0.82
AP1S3-206ENST00000443700 CHD1O14646 1710 aa20.15■□□□□ 0.82
AP1S3-206ENST00000443700 NEURL4Q96JN8 1562 aa20.14■□□□□ 0.82
AP1S3-206ENST00000443700 DEPDC5O75140 1603 aa20.13■□□□□ 0.81
AP1S3-206ENST00000443700 C20orf194Q5TEA3 1177 aa20.13■□□□□ 0.81
AP1S3-206ENST00000443700 TET3O43151 1660 aa20.13■□□□□ 0.81
AP1S3-206ENST00000443700 AMER1Q5JTC6 1135 aaPredicted RBP20.12■□□□□ 0.81
AP1S3-206ENST00000443700 NKTRP30414 1462 aaKnown RBP20.12■□□□□ 0.81
AP1S3-206ENST00000443700 CLTCL1P53675 1640 aa20.11■□□□□ 0.81
AP1S3-206ENST00000443700 PLCH2O75038 1416 aa20.1■□□□□ 0.81
AP1S3-206ENST00000443700 NGEFQ8N5V2 710 aa20.1■□□□□ 0.81
AP1S3-206ENST00000443700 NINLQ9Y2I6 1382 aa20.1■□□□□ 0.81
AP1S3-206ENST00000443700 SLC24A1O60721 1099 aa20.09■□□□□ 0.81
AP1S3-206ENST00000443700 SLFN5Q08AF3 891 aa20.09■□□□□ 0.81
AP1S3-206ENST00000443700 PTPRTO14522 1441 aa20.08■□□□□ 0.81
AP1S3-206ENST00000443700 RTEL1-TNFRSF6BF6WH68 1400 aa20.07■□□□□ 0.8
AP1S3-206ENST00000443700 C8orf34Q49A92 452 aa20.07■□□□□ 0.8
AP1S3-206ENST00000443700 ARAP3Q8WWN8 1544 aa20.06■□□□□ 0.8
AP1S3-206ENST00000443700 ZCCHC11Q5TAX3 1644 aaKnown RBP20.06■□□□□ 0.8
AP1S3-206ENST00000443700 GSE1Q14687 1217 aa20.06■□□□□ 0.8
AP1S3-206ENST00000443700 TRMT2AQ8IZ69 625 aaKnown RBP20.06■□□□□ 0.8
AP1S3-206ENST00000443700 NFKBIBQ15653 356 aa20.06■□□□□ 0.8
AP1S3-206ENST00000443700 ZFYVE16Q7Z3T8 1539 aa20.05■□□□□ 0.8
AP1S3-206ENST00000443700 SKAP1Q86WV1 359 aa20.05■□□□□ 0.8
AP1S3-206ENST00000443700 EFCAB2Q5VUJ9 269 aa20.04■□□□□ 0.8
AP1S3-206ENST00000443700 MYO3AQ8NEV4 1616 aa20.03■□□□□ 0.8
AP1S3-206ENST00000443700 E9PSI1 815 aa20.03■□□□□ 0.8
AP1S3-206ENST00000443700 MAP3K4Q9Y6R4 1608 aa20.02■□□□□ 0.8
AP1S3-206ENST00000443700 MYOM2P54296 1465 aa20.02■□□□□ 0.8
AP1S3-206ENST00000443700 IL27Q8NEV9 243 aa20.02■□□□□ 0.8
AP1S3-206ENST00000443700 VWDEQ8N2E2 1590 aa20.01■□□□□ 0.79
AP1S3-206ENST00000443700 ABCA6Q8N139 1617 aa20■□□□□ 0.79
AP1S3-206ENST00000443700 IFT172Q9UG01 1749 aa20■□□□□ 0.79
AP1S3-206ENST00000443700 CGNL1Q0VF96 1302 aa20■□□□□ 0.79
AP1S3-206ENST00000443700 UHRF1BP1LA0JNW5 1464 aa19.99■□□□□ 0.79
AP1S3-206ENST00000443700 KIF1BO60333 1816 aa19.99■□□□□ 0.79
AP1S3-206ENST00000443700 KANK1Q14678 1352 aa19.99■□□□□ 0.79
AP1S3-206ENST00000443700 TRAPPC8Q9Y2L5 1435 aa19.99■□□□□ 0.79
AP1S3-206ENST00000443700 INO80Q9ULG1 1556 aaPredicted RBP19.97■□□□□ 0.79
AP1S3-206ENST00000443700 MAPK8IP3Q9UPT6 1336 aa19.97■□□□□ 0.79
AP1S3-206ENST00000443700 ERVK-7P63135 1459 aa19.97■□□□□ 0.79
AP1S3-206ENST00000443700 PDE3AQ14432 1141 aa19.96■□□□□ 0.79
AP1S3-206ENST00000443700 SPAG9O60271 1321 aaKnown RBP19.96■□□□□ 0.79
AP1S3-206ENST00000443700 RGS3P49796 1198 aa19.95■□□□□ 0.78
AP1S3-206ENST00000443700 APAF1O14727 1248 aa19.94■□□□□ 0.78
AP1S3-206ENST00000443700 CCDC146Q8IYE0 955 aa19.94■□□□□ 0.78
AP1S3-206ENST00000443700 ZMYM3Q14202 1370 aa19.94■□□□□ 0.78
AP1S3-206ENST00000443700 AAMPQ13685 434 aa19.93■□□□□ 0.78
AP1S3-206ENST00000443700 ATP7AQ04656 1500 aa19.93■□□□□ 0.78
AP1S3-206ENST00000443700 SHPRHQ149N8 1683 aa19.93■□□□□ 0.78
AP1S3-206ENST00000443700 POLR3AO14802 1390 aaPredicted RBP19.93■□□□□ 0.78
AP1S3-206ENST00000443700 ERCC6L2Q5T890 1561 aa19.93■□□□□ 0.78
AP1S3-206ENST00000443700 SLC4A3P48751 1232 aa19.93■□□□□ 0.78
AP1S3-206ENST00000443700 SBNO2Q9Y2G9 1366 aa19.92■□□□□ 0.78
AP1S3-206ENST00000443700 CENPJQ9HC77 1338 aaPredicted RBP19.91■□□□□ 0.78
AP1S3-206ENST00000443700 USP32Q8NFA0 1604 aa19.91■□□□□ 0.78
AP1S3-206ENST00000443700 ZC3H13Q5T200 1668 aaKnown RBP19.91■□□□□ 0.78
AP1S3-206ENST00000443700 SETBP1Q9Y6X0 1596 aa19.9■□□□□ 0.78
AP1S3-206ENST00000443700 FRAT1Q92837 279 aaPredicted RBP19.9■□□□□ 0.78
AP1S3-206ENST00000443700 ABCA9Q8IUA7 1624 aa19.9■□□□□ 0.78
AP1S3-206ENST00000443700 CLUAP1Q96AJ1 413 aa19.89■□□□□ 0.77
AP1S3-206ENST00000443700 BCAR3O75815 825 aa19.88■□□□□ 0.77
AP1S3-206ENST00000443700 CANXP27824 592 aaKnown RBP19.88■□□□□ 0.77
AP1S3-206ENST00000443700 BECN1Q14457 450 aa19.88■□□□□ 0.77
AP1S3-206ENST00000443700 SPINK5Q9NQ38 1064 aaPredicted RBP19.88■□□□□ 0.77
AP1S3-206ENST00000443700 MROH2AA6NES4 1674 aa19.88■□□□□ 0.77
AP1S3-206ENST00000443700 MROH1Q8NDA8 1641 aa19.87■□□□□ 0.77
AP1S3-206ENST00000443700 EFCAB6Q5THR3 1501 aa19.87■□□□□ 0.77
AP1S3-206ENST00000443700 NRXN1Q9ULB1 1477 aa19.87■□□□□ 0.77
AP1S3-206ENST00000443700 RTN4Q9NQC3 1192 aaKnown RBP19.87■□□□□ 0.77
AP1S3-206ENST00000443700 IQSEC2Q5JU85 1478 aa19.86■□□□□ 0.77
AP1S3-206ENST00000443700 PMFBP1Q8TBY8 1022 aa19.85■□□□□ 0.77
AP1S3-206ENST00000443700 QRICH2Q9H0J4 1663 aa19.84■□□□□ 0.77
AP1S3-206ENST00000443700 BRPF3Q9ULD4 1205 aa19.83■□□□□ 0.77
AP1S3-206ENST00000443700 FRAT2O75474 233 aaPredicted RBP19.83■□□□□ 0.76
AP1S3-206ENST00000443700 IGHDP01880 384 aa19.83■□□□□ 0.76
AP1S3-206ENST00000443700 WWC1Q8IX03 1113 aa19.83■□□□□ 0.76
AP1S3-206ENST00000443700 NLRP1Q9C000 1473 aa19.82■□□□□ 0.76
AP1S3-206ENST00000443700 ADGRB3O60242 1522 aa19.81■□□□□ 0.76
AP1S3-206ENST00000443700 LMTK2Q8IWU2 1503 aa19.81■□□□□ 0.76
AP1S3-206ENST00000443700 UPF2Q9HAU5 1272 aaKnown RBP19.81■□□□□ 0.76
AP1S3-206ENST00000443700 ANO8Q9HCE9 1232 aaPredicted RBP19.81■□□□□ 0.76
AP1S3-206ENST00000443700 USP19O94966 1318 aa19.81■□□□□ 0.76
AP1S3-206ENST00000443700 CARD14Q9BXL6 1004 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms