RNA–Protein interactions for RNA: ENST00000442742.6

CASK-208, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

TSL 1 (best) BASIC

Gene CASK, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-208ENST00000442742 ABCC3O15438 1527 aa12.85□□□□□ -0.35
CASK-208ENST00000442742 MADDQ8WXG6 1647 aa12.85□□□□□ -0.35
CASK-208ENST00000442742 SALL2Q9Y467 1007 aaPredicted RBP12.84□□□□□ -0.35
CASK-208ENST00000442742 FKBP8Q14318 412 aa12.84□□□□□ -0.35
CASK-208ENST00000442742 SUPT16HQ9Y5B9 1047 aaKnown RBP12.84□□□□□ -0.35
CASK-208ENST00000442742 MROH2AA6NES4 1674 aa12.84□□□□□ -0.35
CASK-208ENST00000442742 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
CASK-208ENST00000442742 COL17A1Q9UMD9 1497 aaPredicted RBP12.84□□□□□ -0.35
CASK-208ENST00000442742 IRX6P78412 446 aaPredicted RBP12.83□□□□□ -0.36
CASK-208ENST00000442742 STK26Q9P289 416 aa12.83□□□□□ -0.36
CASK-208ENST00000442742 GLI2P10070 1586 aa12.82□□□□□ -0.36
CASK-208ENST00000442742 PER1O15534 1290 aaPredicted RBP12.81□□□□□ -0.36
CASK-208ENST00000442742 SIGLEC1Q9BZZ2 1709 aa12.81□□□□□ -0.36
CASK-208ENST00000442742 ESF1Q9H501 851 aaKnown RBP12.8□□□□□ -0.36
CASK-208ENST00000442742 SCAF11Q99590 1463 aaKnown RBP12.8□□□□□ -0.36
CASK-208ENST00000442742 LMTK2Q8IWU2 1503 aa12.8□□□□□ -0.36
CASK-208ENST00000442742 CAMSAP1Q5T5Y3 1602 aa12.8□□□□□ -0.36
CASK-208ENST00000442742 STAC3Q96MF2 364 aa12.8□□□□□ -0.36
CASK-208ENST00000442742 KNSTRNQ9Y448 316 aa12.79□□□□□ -0.36
CASK-208ENST00000442742 KTN1Q86UP2 1357 aaKnown RBP12.78□□□□□ -0.36
CASK-208ENST00000442742 KIF13AQ9H1H9 1805 aa12.77□□□□□ -0.36
CASK-208ENST00000442742 VGFO15240 615 aaPredicted RBP12.77□□□□□ -0.36
CASK-208ENST00000442742 MYBBP1AQ9BQG0 1328 aaKnown RBP12.77□□□□□ -0.37
CASK-208ENST00000442742 PNISRQ8TF01 805 aaKnown RBP12.77□□□□□ -0.37
CASK-208ENST00000442742 C14orf93Q9H972 538 aaKnown RBP12.76□□□□□ -0.37
CASK-208ENST00000442742 EIF3AQ14152 1382 aaKnown RBP12.76□□□□□ -0.37
CASK-208ENST00000442742 NEFLP07196 543 aa12.76□□□□□ -0.37
CASK-208ENST00000442742 RALBP1Q15311 655 aa12.76□□□□□ -0.37
CASK-208ENST00000442742 SYNMO15061 1565 aa12.76□□□□□ -0.37
CASK-208ENST00000442742 SLC52A1Q9NWF4 448 aa12.75□□□□□ -0.37
CASK-208ENST00000442742 CENPJQ9HC77 1338 aaPredicted RBP12.75□□□□□ -0.37
CASK-208ENST00000442742 ADGRB3O60242 1522 aa12.75□□□□□ -0.37
CASK-208ENST00000442742 CDCA8Q53HL2 280 aa12.74□□□□□ -0.37
CASK-208ENST00000442742 IQGAP1P46940 1657 aa12.74□□□□□ -0.37
CASK-208ENST00000442742 LAMC1P11047 1609 aa12.74□□□□□ -0.37
CASK-208ENST00000442742 TNNT2P45379 298 aaPredicted RBP12.74□□□□□ -0.37
CASK-208ENST00000442742 MYO5BQ9ULV0 1848 aa12.74□□□□□ -0.37
CASK-208ENST00000442742 SLC12A5Q9H2X9 1139 aa12.73□□□□□ -0.37
CASK-208ENST00000442742 MYOM2P54296 1465 aa12.73□□□□□ -0.37
CASK-208ENST00000442742 CEBPAP49715 358 aaPredicted RBP12.73□□□□□ -0.37
CASK-208ENST00000442742 NLRP13Q86W25 1043 aa12.73□□□□□ -0.37
CASK-208ENST00000442742 PIK3C2GO75747 1445 aa12.72□□□□□ -0.37
CASK-208ENST00000442742 RPGRIP1LQ68CZ1 1315 aa12.72□□□□□ -0.37
CASK-208ENST00000442742 PPLO60437 1756 aa12.71□□□□□ -0.37
CASK-208ENST00000442742 IFT172Q9UG01 1749 aa12.71□□□□□ -0.37
CASK-208ENST00000442742 ZMYM4Q5VZL5 1548 aa12.71□□□□□ -0.37
CASK-208ENST00000442742 CABP2Q9NPB3 220 aa12.7□□□□□ -0.38
CASK-208ENST00000442742 CLTCQ00610 1675 aaKnown RBP12.7□□□□□ -0.38
CASK-208ENST00000442742 PARD3Q8TEW0 1356 aa12.7□□□□□ -0.38
CASK-208ENST00000442742 ZBED9Q6R2W3 1325 aa12.7□□□□□ -0.38
CASK-208ENST00000442742 MINK1Q8N4C8 1332 aaPredicted RBP12.7□□□□□ -0.38
CASK-208ENST00000442742 ARHGAP31Q2M1Z3 1444 aa12.7□□□□□ -0.38
CASK-208ENST00000442742 CARD14Q9BXL6 1004 aa12.7□□□□□ -0.38
CASK-208ENST00000442742 PREX1Q8TCU6 1659 aa12.69□□□□□ -0.38
CASK-208ENST00000442742 ERVK-7P63135 1459 aa12.69□□□□□ -0.38
CASK-208ENST00000442742 AMER1Q5JTC6 1135 aaPredicted RBP12.69□□□□□ -0.38
CASK-208ENST00000442742 POGKQ9P215 609 aa12.69□□□□□ -0.38
CASK-208ENST00000442742 BRD4O60885 1362 aaPredicted RBP12.68□□□□□ -0.38
CASK-208ENST00000442742 SRPK2P78362 688 aaKnown RBP12.68□□□□□ -0.38
CASK-208ENST00000442742 PIK3C2BO00750 1634 aa12.68□□□□□ -0.38
CASK-208ENST00000442742 ZMYM3Q14202 1370 aa12.68□□□□□ -0.38
CASK-208ENST00000442742 NRXN1Q9ULB1 1477 aa12.68□□□□□ -0.38
CASK-208ENST00000442742 PRAM1Q96QH2 718 aa12.67□□□□□ -0.38
CASK-208ENST00000442742 NEXMIFQ5QGS0 1516 aa12.67□□□□□ -0.38
CASK-208ENST00000442742 PPP2R1AP30153 589 aa12.66□□□□□ -0.38
CASK-208ENST00000442742 KIAA1210Q9ULL0 1709 aa12.66□□□□□ -0.38
CASK-208ENST00000442742 ZC3H13Q5T200 1668 aaKnown RBP12.66□□□□□ -0.38
CASK-208ENST00000442742 WAPLQ7Z5K2 1190 aa12.66□□□□□ -0.38
CASK-208ENST00000442742 NEURL4Q96JN8 1562 aa12.65□□□□□ -0.38
CASK-208ENST00000442742 ADAMTS8Q9UP79 889 aa12.65□□□□□ -0.38
CASK-208ENST00000442742 ADGRB1O14514 1584 aa12.64□□□□□ -0.39
CASK-208ENST00000442742 KDM5AP29375 1690 aaKnown RBP12.64□□□□□ -0.39
CASK-208ENST00000442742 TMEM131LA2VDJ0 1609 aa12.63□□□□□ -0.39
CASK-208ENST00000442742 EVC2Q86UK5 1308 aa12.63□□□□□ -0.39
CASK-208ENST00000442742 WDR43Q15061 677 aaKnown RBP eCLIP12.62□□□□□ -0.39
CASK-208ENST00000442742 CCDC146Q8IYE0 955 aa12.62□□□□□ -0.39
CASK-208ENST00000442742 CDCA7LQ96GN5 454 aa12.62□□□□□ -0.39
CASK-208ENST00000442742 PPP6R1Q9UPN7 881 aa12.62□□□□□ -0.39
CASK-208ENST00000442742 ARHGEF40Q8TER5 1519 aa12.61□□□□□ -0.39
CASK-208ENST00000442742 MYOM1P52179 1685 aa12.61□□□□□ -0.39
CASK-208ENST00000442742 QRICH2Q9H0J4 1663 aa12.61□□□□□ -0.39
CASK-208ENST00000442742 SLC24A1O60721 1099 aa12.61□□□□□ -0.39
CASK-208ENST00000442742 AGLP35573 1532 aa12.61□□□□□ -0.39
CASK-208ENST00000442742 TXNDC2Q86VQ3 553 aa12.61□□□□□ -0.39
CASK-208ENST00000442742 LRPPRCP42704 1394 aaKnown RBP12.61□□□□□ -0.39
CASK-208ENST00000442742 MORC1Q86VD1 984 aa12.6□□□□□ -0.39
CASK-208ENST00000442742 NSD3Q9BZ95 1437 aa12.6□□□□□ -0.39
CASK-208ENST00000442742 SETBP1Q9Y6X0 1596 aa12.6□□□□□ -0.39
CASK-208ENST00000442742 ASXL1Q8IXJ9 1541 aa12.6□□□□□ -0.39
CASK-208ENST00000442742 RIMS2Q9UQ26 1411 aa12.6□□□□□ -0.39
CASK-208ENST00000442742 A2ML1A8K2U0 1454 aa12.59□□□□□ -0.39
CASK-208ENST00000442742 NUTM2FA1L443 756 aa12.59□□□□□ -0.39
CASK-208ENST00000442742 YTHDC2Q9H6S0 1430 aaKnown RBP12.58□□□□□ -0.4
CASK-208ENST00000442742 NUDCQ9Y266 331 aa12.58□□□□□ -0.4
CASK-208ENST00000442742 SLC26A8Q96RN1 970 aa12.58□□□□□ -0.4
CASK-208ENST00000442742 CDK19Q9BWU1 502 aa12.57□□□□□ -0.4
CASK-208ENST00000442742 GGNBP2Q9H3C7 697 aa12.57□□□□□ -0.4
CASK-208ENST00000442742 TNRQ92752 1358 aa12.57□□□□□ -0.4
CASK-208ENST00000442742 PLEKHH1Q9ULM0 1364 aa12.57□□□□□ -0.4
CASK-208ENST00000442742 SBNO2Q9Y2G9 1366 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms