RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 TXNDC2Q86VQ3 553 aa11.12□□□□□ -0.63
RFX3-206ENST00000442560 DUOX2Q9NRD8 1548 aa11.12□□□□□ -0.63
RFX3-206ENST00000442560 MROH1Q8NDA8 1641 aa11.11□□□□□ -0.63
RFX3-206ENST00000442560 LTKP29376 864 aa11.11□□□□□ -0.63
RFX3-206ENST00000442560 POLR1AO95602 1720 aaPredicted RBP11.11□□□□□ -0.63
RFX3-206ENST00000442560 EIF2AK4Q9P2K8 1649 aaKnown RBP11.1□□□□□ -0.63
RFX3-206ENST00000442560 DAPK1P53355 1430 aa11.09□□□□□ -0.63
RFX3-206ENST00000442560 ARHGAP31Q2M1Z3 1444 aa11.09□□□□□ -0.63
RFX3-206ENST00000442560 DEPDC5O75140 1603 aa11.09□□□□□ -0.63
RFX3-206ENST00000442560 ZC3H13Q5T200 1668 aaKnown RBP11.09□□□□□ -0.63
RFX3-206ENST00000442560 C19orf67A6NJJ6 358 aa11.09□□□□□ -0.63
RFX3-206ENST00000442560 STAG3Q9UJ98 1225 aa11.09□□□□□ -0.63
RFX3-206ENST00000442560 ERBINQ96RT1 1412 aa11.09□□□□□ -0.63
RFX3-206ENST00000442560 KANK1Q14678 1352 aa11.08□□□□□ -0.64
RFX3-206ENST00000442560 GABBR2O75899 941 aa11.08□□□□□ -0.64
RFX3-206ENST00000442560 EID1Q9Y6B2 187 aa11.08□□□□□ -0.64
RFX3-206ENST00000442560 LRRC7Q96NW7 1537 aa11.08□□□□□ -0.64
RFX3-206ENST00000442560 FGD6Q6ZV73 1430 aa11.08□□□□□ -0.64
RFX3-206ENST00000442560 SCAF11Q99590 1463 aaKnown RBP11.07□□□□□ -0.64
RFX3-206ENST00000442560 PTPN23Q9H3S7 1636 aa11.07□□□□□ -0.64
RFX3-206ENST00000442560 IDI1Q13907 227 aa11.07□□□□□ -0.64
RFX3-206ENST00000442560 ANKRD30AQ9BXX3 1397 aa11.06□□□□□ -0.64
RFX3-206ENST00000442560 IQGAP1P46940 1657 aa11.06□□□□□ -0.64
RFX3-206ENST00000442560 CEP152O94986 1710 aa11.06□□□□□ -0.64
RFX3-206ENST00000442560 ARHGAP23Q9P227 1491 aa11.06□□□□□ -0.64
RFX3-206ENST00000442560 PRDM15P57071 1507 aaPredicted RBP11.05□□□□□ -0.64
RFX3-206ENST00000442560 FAM50AQ14320 339 aaKnown RBP11.05□□□□□ -0.64
RFX3-206ENST00000442560 ALKQ9UM73 1620 aa11.05□□□□□ -0.64
RFX3-206ENST00000442560 TMEM2Q9UHN6 1383 aa11.04□□□□□ -0.64
RFX3-206ENST00000442560 SSUH2Q9Y2M2 353 aa11.04□□□□□ -0.64
RFX3-206ENST00000442560 SLIT1O75093 1534 aa11.04□□□□□ -0.64
RFX3-206ENST00000442560 UBR1Q8IWV7 1749 aa11.04□□□□□ -0.64
RFX3-206ENST00000442560 MED1Q15648 1581 aaPredicted RBP11.03□□□□□ -0.64
RFX3-206ENST00000442560 SLC26A8Q96RN1 970 aa11.03□□□□□ -0.64
RFX3-206ENST00000442560 STRCP1A6NGW2 1772 aa11.01□□□□□ -0.65
RFX3-206ENST00000442560 LMTK2Q8IWU2 1503 aa11.01□□□□□ -0.65
RFX3-206ENST00000442560 KCNA6P17658 529 aa11.01□□□□□ -0.65
RFX3-206ENST00000442560 RBM33Q96EV2 1170 aaKnown RBP11.01□□□□□ -0.65
RFX3-206ENST00000442560 BCANQ96GW7 911 aa11.01□□□□□ -0.65
RFX3-206ENST00000442560 CROCC2H7BZ55 1655 aa11.01□□□□□ -0.65
RFX3-206ENST00000442560 PIK3C2BO00750 1634 aa11□□□□□ -0.65
RFX3-206ENST00000442560 LHX8Q68G74 356 aa11□□□□□ -0.65
RFX3-206ENST00000442560 SLC52A1Q9NWF4 448 aa11□□□□□ -0.65
RFX3-206ENST00000442560 NOS1P29475 1434 aa11□□□□□ -0.65
RFX3-206ENST00000442560 EFCAB6Q5THR3 1501 aa10.99□□□□□ -0.65
RFX3-206ENST00000442560 SYNMO15061 1565 aa10.99□□□□□ -0.65
RFX3-206ENST00000442560 PRR29P0C7W0 189 aa10.99□□□□□ -0.65
RFX3-206ENST00000442560 PROSER2Q86WR7 435 aaPredicted RBP10.99□□□□□ -0.65
RFX3-206ENST00000442560 TMEM94Q12767 1356 aa10.99□□□□□ -0.65
RFX3-206ENST00000442560 CFAP65Q6ZU64 1925 aaKnown RBP10.99□□□□□ -0.65
RFX3-206ENST00000442560 ANKRD50Q9ULJ7 1429 aa10.98□□□□□ -0.65
RFX3-206ENST00000442560 ADGRL2O95490 1459 aa10.98□□□□□ -0.65
RFX3-206ENST00000442560 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
RFX3-206ENST00000442560 FAM135BQ49AJ0 1406 aa10.95□□□□□ -0.66
RFX3-206ENST00000442560 PPP1R15AO75807 674 aaPredicted RBP10.95□□□□□ -0.66
RFX3-206ENST00000442560 TET3O43151 1660 aa10.95□□□□□ -0.66
RFX3-206ENST00000442560 ADGRB3O60242 1522 aa10.94□□□□□ -0.66
RFX3-206ENST00000442560 ITGAEP38570 1179 aa10.94□□□□□ -0.66
RFX3-206ENST00000442560 HDGFP51858 240 aaKnown RBP10.94□□□□□ -0.66
RFX3-206ENST00000442560 RGS17Q9UGC6 210 aaPredicted RBP10.94□□□□□ -0.66
RFX3-206ENST00000442560 NUTM2DQ5VT03 806 aaPredicted RBP10.93□□□□□ -0.66
RFX3-206ENST00000442560 RIMS2Q9UQ26 1411 aa10.92□□□□□ -0.66
RFX3-206ENST00000442560 PPARGC1BQ86YN6 1023 aaKnown RBP10.92□□□□□ -0.66
RFX3-206ENST00000442560 RPRD2Q5VT52 1461 aaKnown RBP10.92□□□□□ -0.66
RFX3-206ENST00000442560 MSH6P52701 1360 aa10.91□□□□□ -0.66
RFX3-206ENST00000442560 PLEKHG1Q9ULL1 1385 aa10.91□□□□□ -0.66
RFX3-206ENST00000442560 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.91□□□□□ -0.66
RFX3-206ENST00000442560 TBX22Q9Y458 520 aa10.91□□□□□ -0.66
RFX3-206ENST00000442560 KDM5AP29375 1690 aaKnown RBP10.91□□□□□ -0.66
RFX3-206ENST00000442560 ZFYVE9O95405 1425 aa10.91□□□□□ -0.66
RFX3-206ENST00000442560 SLAIN2Q9P270 581 aa10.9□□□□□ -0.66
RFX3-206ENST00000442560 XIRP1Q702N8 1843 aaKnown RBP10.89□□□□□ -0.67
RFX3-206ENST00000442560 NKTRP30414 1462 aaKnown RBP10.89□□□□□ -0.67
RFX3-206ENST00000442560 POTEAQ6S8J7 498 aa10.89□□□□□ -0.67
RFX3-206ENST00000442560 NUP155O75694 1391 aa10.89□□□□□ -0.67
RFX3-206ENST00000442560 ROCK1Q13464 1354 aa10.89□□□□□ -0.67
RFX3-206ENST00000442560 CD44P16070 742 aaKnown RBP10.88□□□□□ -0.67
RFX3-206ENST00000442560 C14orf37Q86TY3 774 aa10.88□□□□□ -0.67
RFX3-206ENST00000442560 NWD1Q149M9 1564 aa10.87□□□□□ -0.67
RFX3-206ENST00000442560 POTEIP0CG38 1075 aa10.87□□□□□ -0.67
RFX3-206ENST00000442560 ADAMTS13Q76LX8 1427 aa10.86□□□□□ -0.67
RFX3-206ENST00000442560 TMEM131LA2VDJ0 1609 aa10.86□□□□□ -0.67
RFX3-206ENST00000442560 ROBO1Q9Y6N7 1651 aa10.85□□□□□ -0.67
RFX3-206ENST00000442560 AMOTL2Q9Y2J4 779 aa10.85□□□□□ -0.67
RFX3-206ENST00000442560 UNC13BO14795 1591 aa10.85□□□□□ -0.67
RFX3-206ENST00000442560 ATF3P18847 181 aa10.84□□□□□ -0.67
RFX3-206ENST00000442560 CADPS2Q86UW7 1296 aa10.84□□□□□ -0.67
RFX3-206ENST00000442560 C19orf44Q9H6X5 657 aa10.84□□□□□ -0.67
RFX3-206ENST00000442560 JCADQ9P266 1359 aa10.84□□□□□ -0.67
RFX3-206ENST00000442560 NCOA3Q9Y6Q9 1424 aa10.84□□□□□ -0.67
RFX3-206ENST00000442560 GCC2Q8IWJ2 1684 aa10.83□□□□□ -0.68
RFX3-206ENST00000442560 ZNF326Q5BKZ1 582 aaKnown RBP10.83□□□□□ -0.68
RFX3-206ENST00000442560 PIK3R4Q99570 1358 aa10.82□□□□□ -0.68
RFX3-206ENST00000442560 FARP1Q9Y4F1 1045 aaPredicted RBP10.82□□□□□ -0.68
RFX3-206ENST00000442560 PTPRUQ92729 1446 aa10.82□□□□□ -0.68
RFX3-206ENST00000442560 E9PCH4 1651 aa10.82□□□□□ -0.68
RFX3-206ENST00000442560 IQGAP3Q86VI3 1631 aa10.8□□□□□ -0.68
RFX3-206ENST00000442560 MEX3CQ5U5Q3 659 aaKnown RBP10.8□□□□□ -0.68
RFX3-206ENST00000442560 CHD2O14647 1828 aaKnown RBP10.79□□□□□ -0.68
RFX3-206ENST00000442560 MYO5BQ9ULV0 1848 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms