RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 PPLO60437 1756 aa23.79■■□□□ 1.4
TMEM39B-203ENST00000441402 FBXO31Q5XUX0 539 aaPredicted RBP23.79■■□□□ 1.4
TMEM39B-203ENST00000441402 ESF1Q9H501 851 aaKnown RBP23.79■■□□□ 1.4
TMEM39B-203ENST00000441402 ZMYM3Q14202 1370 aa23.79■■□□□ 1.4
TMEM39B-203ENST00000441402 CHGAP10645 457 aaKnown RBP23.78■■□□□ 1.4
TMEM39B-203ENST00000441402 ADGRF5Q8IZF2 1346 aa23.77■■□□□ 1.39
TMEM39B-203ENST00000441402 ST20-MTHFSA0A0A6YYL1 179 aa23.76■■□□□ 1.39
TMEM39B-203ENST00000441402 TMEM131LA2VDJ0 1609 aa23.75■■□□□ 1.39
TMEM39B-203ENST00000441402 ZFYVE9O95405 1425 aa23.74■■□□□ 1.39
TMEM39B-203ENST00000441402 KIF7Q2M1P5 1343 aa23.74■■□□□ 1.39
TMEM39B-203ENST00000441402 VGFO15240 615 aaPredicted RBP23.72■■□□□ 1.39
TMEM39B-203ENST00000441402 NEXMIFQ5QGS0 1516 aa23.72■■□□□ 1.39
TMEM39B-203ENST00000441402 PIK3C2GO75747 1445 aa23.71■■□□□ 1.39
TMEM39B-203ENST00000441402 IQGAP1P46940 1657 aa23.7■■□□□ 1.38
TMEM39B-203ENST00000441402 SCAF11Q99590 1463 aaKnown RBP23.69■■□□□ 1.38
TMEM39B-203ENST00000441402 C14orf93Q9H972 538 aaKnown RBP23.69■■□□□ 1.38
TMEM39B-203ENST00000441402 SETBP1Q9Y6X0 1596 aa23.68■■□□□ 1.38
TMEM39B-203ENST00000441402 CFAP70Q5T0N1 1121 aa23.68■■□□□ 1.38
TMEM39B-203ENST00000441402 TESK2Q96S53 571 aa23.66■■□□□ 1.38
TMEM39B-203ENST00000441402 MYO5BQ9ULV0 1848 aa23.66■■□□□ 1.38
TMEM39B-203ENST00000441402 A2ML1A8K2U0 1454 aa23.63■■□□□ 1.37
TMEM39B-203ENST00000441402 ANP32CO43423 234 aa23.62■■□□□ 1.37
TMEM39B-203ENST00000441402 TNRQ92752 1358 aa23.61■■□□□ 1.37
TMEM39B-203ENST00000441402 SLC24A1O60721 1099 aa23.61■■□□□ 1.37
TMEM39B-203ENST00000441402 EIF3AQ14152 1382 aaKnown RBP23.61■■□□□ 1.37
TMEM39B-203ENST00000441402 KDM5AP29375 1690 aaKnown RBP23.6■■□□□ 1.37
TMEM39B-203ENST00000441402 STAG3Q9UJ98 1225 aa23.6■■□□□ 1.37
TMEM39B-203ENST00000441402 ADGRB1O14514 1584 aa23.58■■□□□ 1.37
TMEM39B-203ENST00000441402 FER1L4A9Z1Z3 1794 aa23.57■■□□□ 1.36
TMEM39B-203ENST00000441402 TMF1P82094 1093 aa23.57■■□□□ 1.36
TMEM39B-203ENST00000441402 CCER2I3L3R5 266 aa23.55■■□□□ 1.36
TMEM39B-203ENST00000441402 C3P01024 1663 aa23.55■■□□□ 1.36
TMEM39B-203ENST00000441402 NLRP1Q9C000 1473 aa23.55■■□□□ 1.36
TMEM39B-203ENST00000441402 MYO3AQ8NEV4 1616 aa23.53■■□□□ 1.36
TMEM39B-203ENST00000441402 SBNO2Q9Y2G9 1366 aa23.52■■□□□ 1.36
TMEM39B-203ENST00000441402 RIMS2Q9UQ26 1411 aa23.52■■□□□ 1.36
TMEM39B-203ENST00000441402 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.52■■□□□ 1.36
TMEM39B-203ENST00000441402 DISP3Q9P2K9 1392 aa23.51■■□□□ 1.35
TMEM39B-203ENST00000441402 HDGFP51858 240 aaKnown RBP23.51■■□□□ 1.35
TMEM39B-203ENST00000441402 NUTM2DQ5VT03 806 aaPredicted RBP23.51■■□□□ 1.35
TMEM39B-203ENST00000441402 CDCA8Q53HL2 280 aa23.5■■□□□ 1.35
TMEM39B-203ENST00000441402 UBR1Q8IWV7 1749 aa23.48■■□□□ 1.35
TMEM39B-203ENST00000441402 CEBPAP49715 358 aaPredicted RBP23.48■■□□□ 1.35
TMEM39B-203ENST00000441402 POLR3GLQ9BT43 218 aa23.48■■□□□ 1.35
TMEM39B-203ENST00000441402 TMEM132EQ6IEE7 984 aa23.47■■□□□ 1.35
TMEM39B-203ENST00000441402 ALKQ9UM73 1620 aa23.45■■□□□ 1.34
TMEM39B-203ENST00000441402 ADAMTSL3P82987 1691 aa23.45■■□□□ 1.34
TMEM39B-203ENST00000441402 TMEM2Q9UHN6 1383 aa23.44■■□□□ 1.34
TMEM39B-203ENST00000441402 CENPJQ9HC77 1338 aaPredicted RBP23.44■■□□□ 1.34
TMEM39B-203ENST00000441402 PRKRIP1Q9H875 184 aaPredicted RBP23.44■■□□□ 1.34
TMEM39B-203ENST00000441402 ASXL1Q8IXJ9 1541 aa23.43■■□□□ 1.34
TMEM39B-203ENST00000441402 TRAK1Q9UPV9 953 aa23.43■■□□□ 1.34
TMEM39B-203ENST00000441402 ARHGEF28Q8N1W1 1705 aaKnown RBP23.39■■□□□ 1.33
TMEM39B-203ENST00000441402 YTHDC2Q9H6S0 1430 aaKnown RBP23.38■■□□□ 1.33
TMEM39B-203ENST00000441402 PER1O15534 1290 aaPredicted RBP23.38■■□□□ 1.33
TMEM39B-203ENST00000441402 PUS7Q96PZ0 661 aaKnown RBP23.38■■□□□ 1.33
TMEM39B-203ENST00000441402 SETD1AO15047 1707 aaKnown RBP23.37■■□□□ 1.33
TMEM39B-203ENST00000441402 RIMS1Q86UR5 1692 aaKnown RBP23.37■■□□□ 1.33
TMEM39B-203ENST00000441402 QRICH2Q9H0J4 1663 aa23.36■■□□□ 1.33
TMEM39B-203ENST00000441402 SLIT1O75093 1534 aa23.36■■□□□ 1.33
TMEM39B-203ENST00000441402 NRXN3Q9Y4C0 1643 aa23.36■■□□□ 1.33
TMEM39B-203ENST00000441402 PTPRMP28827 1452 aa23.36■■□□□ 1.33
TMEM39B-203ENST00000441402 ARHGAP23Q9P227 1491 aa23.36■■□□□ 1.33
TMEM39B-203ENST00000441402 KTN1Q86UP2 1357 aaKnown RBP23.35■■□□□ 1.33
TMEM39B-203ENST00000441402 THEMISQ8N1K5 641 aaPredicted RBP23.34■■□□□ 1.33
TMEM39B-203ENST00000441402 DLC1Q96QB1 1528 aa23.33■■□□□ 1.32
TMEM39B-203ENST00000441402 LRPPRCP42704 1394 aaKnown RBP23.32■■□□□ 1.32
TMEM39B-203ENST00000441402 ABCC11Q96J66 1382 aa23.32■■□□□ 1.32
TMEM39B-203ENST00000441402 CENPBP07199 599 aaPredicted RBP23.32■■□□□ 1.32
TMEM39B-203ENST00000441402 PANK3Q9H999 370 aa23.32■■□□□ 1.32
TMEM39B-203ENST00000441402 PLEKHG1Q9ULL1 1385 aa23.31■■□□□ 1.32
TMEM39B-203ENST00000441402 SETD1BQ9UPS6 1966 aaKnown RBP23.3■■□□□ 1.32
TMEM39B-203ENST00000441402 LTKP29376 864 aa23.29■■□□□ 1.32
TMEM39B-203ENST00000441402 YTHDC1Q96MU7 727 aaKnown RBP23.29■■□□□ 1.32
TMEM39B-203ENST00000441402 EID1Q9Y6B2 187 aa23.29■■□□□ 1.32
TMEM39B-203ENST00000441402 MYOM1P52179 1685 aa23.29■■□□□ 1.32
TMEM39B-203ENST00000441402 RALBP1Q15311 655 aa23.28■■□□□ 1.32
TMEM39B-203ENST00000441402 TXNDC2Q86VQ3 553 aa23.28■■□□□ 1.32
TMEM39B-203ENST00000441402 SIRT1Q96EB6 747 aa23.28■■□□□ 1.32
TMEM39B-203ENST00000441402 STK26Q9P289 416 aa23.28■■□□□ 1.32
TMEM39B-203ENST00000441402 EVC2Q86UK5 1308 aa23.27■■□□□ 1.32
TMEM39B-203ENST00000441402 CEP170BQ9Y4F5 1589 aaPredicted RBP23.26■■□□□ 1.31
TMEM39B-203ENST00000441402 ADAMTS13Q76LX8 1427 aa23.26■■□□□ 1.31
TMEM39B-203ENST00000441402 MED14O60244 1454 aa23.26■■□□□ 1.31
TMEM39B-203ENST00000441402 PLPPR3Q6T4P5 718 aa23.24■■□□□ 1.31
TMEM39B-203ENST00000441402 METP08581 1390 aa23.24■■□□□ 1.31
TMEM39B-203ENST00000441402 TECPR2O15040 1411 aa23.24■■□□□ 1.31
TMEM39B-203ENST00000441402 PRAM1Q96QH2 718 aa23.23■■□□□ 1.31
TMEM39B-203ENST00000441402 ZNF142P52746 1687 aaPredicted RBP23.23■■□□□ 1.31
TMEM39B-203ENST00000441402 TULP4Q9NRJ4 1543 aa23.23■■□□□ 1.31
TMEM39B-203ENST00000441402 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
TMEM39B-203ENST00000441402 POGKQ9P215 609 aa23.23■■□□□ 1.31
TMEM39B-203ENST00000441402 KNDC1Q76NI1 1749 aa23.22■■□□□ 1.31
TMEM39B-203ENST00000441402 PARD3Q8TEW0 1356 aa23.22■■□□□ 1.31
TMEM39B-203ENST00000441402 NPC1L1Q9UHC9 1359 aa23.21■■□□□ 1.31
TMEM39B-203ENST00000441402 FAM135BQ49AJ0 1406 aa23.2■■□□□ 1.31
TMEM39B-203ENST00000441402 KNSTRNQ9Y448 316 aa23.2■■□□□ 1.3
TMEM39B-203ENST00000441402 TBX22Q9Y458 520 aa23.2■■□□□ 1.3
TMEM39B-203ENST00000441402 BCANQ96GW7 911 aa23.18■■□□□ 1.3
TMEM39B-203ENST00000441402 MYBBP1AQ9BQG0 1328 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms