RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 ARHGEF40Q8TER5 1519 aa7.47□□□□□ -1.21
CCDC140-202ENST00000440903 ANKRD30AQ9BXX3 1397 aa7.47□□□□□ -1.21
CCDC140-202ENST00000440903 RICTORQ6R327 1708 aa7.47□□□□□ -1.21
CCDC140-202ENST00000440903 INO80Q9ULG1 1556 aaPredicted RBP7.47□□□□□ -1.21
CCDC140-202ENST00000440903 RTEL1-TNFRSF6BF6WH68 1400 aa7.47□□□□□ -1.21
CCDC140-202ENST00000440903 TRAPPC8Q9Y2L5 1435 aa7.47□□□□□ -1.21
CCDC140-202ENST00000440903 ITGAEP38570 1179 aa7.47□□□□□ -1.21
CCDC140-202ENST00000440903 TRIM26Q12899 539 aaPredicted RBP7.47□□□□□ -1.21
CCDC140-202ENST00000440903 MBD5Q9P267 1494 aa7.47□□□□□ -1.21
CCDC140-202ENST00000440903 ZNF644Q9H582 1327 aaPredicted RBP7.47□□□□□ -1.21
CCDC140-202ENST00000440903 PLXNC1O60486 1568 aa7.46□□□□□ -1.21
CCDC140-202ENST00000440903 FRMPD1Q5SYB0 1578 aa7.46□□□□□ -1.21
CCDC140-202ENST00000440903 HNRNPMP52272 730 aaKnown RBP eCLIP7.46□□□□□ -1.22
CCDC140-202ENST00000440903 MLH3Q9UHC1 1453 aa7.46□□□□□ -1.22
CCDC140-202ENST00000440903 ARHGEF12Q9NZN5 1544 aa7.46□□□□□ -1.22
CCDC140-202ENST00000440903 ABCC5O15440 1437 aa7.45□□□□□ -1.22
CCDC140-202ENST00000440903 ADGRL2O95490 1459 aa7.45□□□□□ -1.22
CCDC140-202ENST00000440903 POTEB3A0JP26 581 aa7.45□□□□□ -1.22
CCDC140-202ENST00000440903 G3V3G9 751 aa7.45□□□□□ -1.22
CCDC140-202ENST00000440903 POTEBQ6S5H4 581 aa7.45□□□□□ -1.22
CCDC140-202ENST00000440903 ROCK1Q13464 1354 aa7.45□□□□□ -1.22
CCDC140-202ENST00000440903 DUOX2Q9NRD8 1548 aa7.44□□□□□ -1.22
CCDC140-202ENST00000440903 FKBP8Q14318 412 aa7.44□□□□□ -1.22
CCDC140-202ENST00000440903 GCC2Q8IWJ2 1684 aa7.44□□□□□ -1.22
CCDC140-202ENST00000440903 KIF15Q9NS87 1388 aa7.44□□□□□ -1.22
CCDC140-202ENST00000440903 ERBINQ96RT1 1412 aa7.44□□□□□ -1.22
CCDC140-202ENST00000440903 DIP2CQ9Y2E4 1556 aa7.43□□□□□ -1.22
CCDC140-202ENST00000440903 ABCA6Q8N139 1617 aa7.43□□□□□ -1.22
CCDC140-202ENST00000440903 RAPGEF3O95398 923 aa7.43□□□□□ -1.22
CCDC140-202ENST00000440903 GSE1Q14687 1217 aa7.43□□□□□ -1.22
CCDC140-202ENST00000440903 KLHL34Q8N239 644 aa7.43□□□□□ -1.22
CCDC140-202ENST00000440903 AFAP1Q8N556 730 aa7.43□□□□□ -1.22
CCDC140-202ENST00000440903 ACIN1Q9UKV3 1341 aaKnown RBP7.43□□□□□ -1.22
CCDC140-202ENST00000440903 REREQ9P2R6 1566 aa7.42□□□□□ -1.22
CCDC140-202ENST00000440903 KIDINS220Q9ULH0 1771 aa7.42□□□□□ -1.22
CCDC140-202ENST00000440903 ZNF710Q8N1W2 664 aa7.42□□□□□ -1.22
CCDC140-202ENST00000440903 CHIC2Q9UKJ5 165 aa7.42□□□□□ -1.22
CCDC140-202ENST00000440903 HFM1A2PYH4 1435 aa7.42□□□□□ -1.22
CCDC140-202ENST00000440903 A2MP01023 1474 aa7.42□□□□□ -1.22
CCDC140-202ENST00000440903 EIF2AK4Q9P2K8 1649 aaKnown RBP7.41□□□□□ -1.22
CCDC140-202ENST00000440903 PSEN1P49768 467 aa7.41□□□□□ -1.22
CCDC140-202ENST00000440903 ANKRD50Q9ULJ7 1429 aa7.41□□□□□ -1.22
CCDC140-202ENST00000440903 ATP10AO60312 1499 aa7.41□□□□□ -1.22
CCDC140-202ENST00000440903 FBXO3Q9UK99 471 aa7.4□□□□□ -1.22
CCDC140-202ENST00000440903 NCOA1Q15788 1441 aa7.4□□□□□ -1.22
CCDC140-202ENST00000440903 YEATS2Q9ULM3 1422 aa7.4□□□□□ -1.22
CCDC140-202ENST00000440903 COL17A1Q9UMD9 1497 aaPredicted RBP7.4□□□□□ -1.22
CCDC140-202ENST00000440903 FAM135AQ9P2D6 1515 aa7.39□□□□□ -1.23
CCDC140-202ENST00000440903 KANK1Q14678 1352 aa7.39□□□□□ -1.23
CCDC140-202ENST00000440903 ARID4BQ4LE39 1312 aaPredicted RBP7.39□□□□□ -1.23
CCDC140-202ENST00000440903 RRP7BPQ9NSQ0 103 aa7.39□□□□□ -1.23
CCDC140-202ENST00000440903 AGLP35573 1532 aa7.38□□□□□ -1.23
CCDC140-202ENST00000440903 NAIPQ13075 1403 aa7.38□□□□□ -1.23
CCDC140-202ENST00000440903 PTPRKQ15262 1439 aa7.38□□□□□ -1.23
CCDC140-202ENST00000440903 SETD5Q9C0A6 1442 aa7.38□□□□□ -1.23
CCDC140-202ENST00000440903 DHX29Q7Z478 1369 aaKnown RBP7.38□□□□□ -1.23
CCDC140-202ENST00000440903 ERBB3P21860 1342 aa7.38□□□□□ -1.23
CCDC140-202ENST00000440903 ESF1Q9H501 851 aaKnown RBP7.38□□□□□ -1.23
CCDC140-202ENST00000440903 DPY19L2Q6NUT2 758 aa7.37□□□□□ -1.23
CCDC140-202ENST00000440903 RNF166Q96A37 237 aaPredicted RBP7.37□□□□□ -1.23
CCDC140-202ENST00000440903 PCGF6Q9BYE7 350 aa7.37□□□□□ -1.23
CCDC140-202ENST00000440903 BCORL1Q5H9F3 1711 aa7.36□□□□□ -1.23
CCDC140-202ENST00000440903 ZC3H13Q5T200 1668 aaKnown RBP7.36□□□□□ -1.23
CCDC140-202ENST00000440903 BOLA1Q9Y3E2 137 aa7.36□□□□□ -1.23
CCDC140-202ENST00000440903 RNF17Q9BXT8 1623 aaKnown RBP7.36□□□□□ -1.23
CCDC140-202ENST00000440903 UNC13BO14795 1591 aa7.36□□□□□ -1.23
CCDC140-202ENST00000440903 PRDM15P57071 1507 aaPredicted RBP7.36□□□□□ -1.23
CCDC140-202ENST00000440903 RAB3GAP2Q9H2M9 1393 aa7.35□□□□□ -1.23
CCDC140-202ENST00000440903 KIF3BO15066 747 aa7.35□□□□□ -1.23
CCDC140-202ENST00000440903 HOXB1P14653 301 aaPredicted RBP7.35□□□□□ -1.23
CCDC140-202ENST00000440903 PDAP1Q13442 181 aaKnown RBP7.35□□□□□ -1.23
CCDC140-202ENST00000440903 DOK7Q18PE1 504 aa7.35□□□□□ -1.23
CCDC140-202ENST00000440903 CABP2Q9NPB3 220 aa7.35□□□□□ -1.23
CCDC140-202ENST00000440903 KDM5DQ9BY66 1539 aa7.35□□□□□ -1.23
CCDC140-202ENST00000440903 CNTLNQ9NXG0 1405 aa7.35□□□□□ -1.23
CCDC140-202ENST00000440903 DEPDC5O75140 1603 aa7.34□□□□□ -1.23
CCDC140-202ENST00000440903 HOXB3P14651 431 aaPredicted RBP7.34□□□□□ -1.23
CCDC140-202ENST00000440903 TRIM52Q96A61 297 aa7.34□□□□□ -1.23
CCDC140-202ENST00000440903 RIMBP2O15034 1052 aa7.33□□□□□ -1.24
CCDC140-202ENST00000440903 CHRM1P11229 460 aaPredicted RBP7.33□□□□□ -1.24
CCDC140-202ENST00000440903 GGT6Q6P531 493 aa7.33□□□□□ -1.24
CCDC140-202ENST00000440903 IQGAP3Q86VI3 1631 aa7.32□□□□□ -1.24
CCDC140-202ENST00000440903 HRCP23327 699 aa7.32□□□□□ -1.24
CCDC140-202ENST00000440903 MLECQ14165 292 aa7.32□□□□□ -1.24
CCDC140-202ENST00000440903 NUP155O75694 1391 aa7.32□□□□□ -1.24
CCDC140-202ENST00000440903 WASHC2CQ9Y4E1 1318 aa7.31□□□□□ -1.24
CCDC140-202ENST00000440903 FER1L4A9Z1Z3 1794 aa7.31□□□□□ -1.24
CCDC140-202ENST00000440903 VARS2Q5ST30 1063 aaKnown RBP7.31□□□□□ -1.24
CCDC140-202ENST00000440903 TET3O43151 1660 aa7.31□□□□□ -1.24
CCDC140-202ENST00000440903 ABCC3O15438 1527 aa7.31□□□□□ -1.24
CCDC140-202ENST00000440903 ILDR1Q86SU0 546 aaPredicted RBP7.3□□□□□ -1.24
CCDC140-202ENST00000440903 MROH2AA6NES4 1674 aa7.3□□□□□ -1.24
CCDC140-202ENST00000440903 EFCAB6Q5THR3 1501 aa7.3□□□□□ -1.24
CCDC140-202ENST00000440903 LMTK2Q8IWU2 1503 aa7.3□□□□□ -1.24
CCDC140-202ENST00000440903 CAMSAP1Q5T5Y3 1602 aa7.3□□□□□ -1.24
CCDC140-202ENST00000440903 MROH1Q8NDA8 1641 aa7.3□□□□□ -1.24
CCDC140-202ENST00000440903 RPRD2Q5VT52 1461 aaKnown RBP7.3□□□□□ -1.24
CCDC140-202ENST00000440903 VASPP50552 380 aaPredicted RBP7.29□□□□□ -1.24
CCDC140-202ENST00000440903 MADDQ8WXG6 1647 aa7.29□□□□□ -1.24
CCDC140-202ENST00000440903 CEP152O94986 1710 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms