RNA–Protein interactions for RNA: ENST00000440192.1

SDCBPP1-201, Transcript of syndecan binding protein pseudogene 1, humanhuman

BASIC

Gene SDCBPP1, Length 890 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP1-201ENST00000440192 RCCD1A6NED2 376 aa8.52□□□□□ -1.05
SDCBPP1-201ENST00000440192 TJAP1Q5JTD0 557 aa8.52□□□□□ -1.05
SDCBPP1-201ENST00000440192 TMEM134Q9H6X4 195 aa8.52□□□□□ -1.05
SDCBPP1-201ENST00000440192 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.51□□□□□ -1.05
SDCBPP1-201ENST00000440192 GNPATO15228 680 aa8.5□□□□□ -1.05
SDCBPP1-201ENST00000440192 COPS2P61201 443 aa8.5□□□□□ -1.05
SDCBPP1-201ENST00000440192 GPIHBP1Q8IV16 184 aa8.5□□□□□ -1.05
SDCBPP1-201ENST00000440192 KMT5BQ4FZB7 885 aa8.49□□□□□ -1.05
SDCBPP1-201ENST00000440192 PCDHB3Q9Y5E6 796 aa8.49□□□□□ -1.05
SDCBPP1-201ENST00000440192 RSPH4AQ5TD94 716 aa8.48□□□□□ -1.05
SDCBPP1-201ENST00000440192 PXYLP1Q8TE99 480 aa8.48□□□□□ -1.05
SDCBPP1-201ENST00000440192 ZNF516Q92618 1163 aa8.47□□□□□ -1.05
SDCBPP1-201ENST00000440192 IRX2Q9BZI1 471 aaPredicted RBP8.47□□□□□ -1.05
SDCBPP1-201ENST00000440192 METTL3Q86U44 580 aaKnown RBP8.46□□□□□ -1.06
SDCBPP1-201ENST00000440192 CFHP08603 1231 aa8.45□□□□□ -1.06
SDCBPP1-201ENST00000440192 PRKCSHP14314 528 aaPredicted RBP8.45□□□□□ -1.06
SDCBPP1-201ENST00000440192 FECHP22830 423 aa8.45□□□□□ -1.06
SDCBPP1-201ENST00000440192 GGCXP38435 758 aa8.45□□□□□ -1.06
SDCBPP1-201ENST00000440192 ZPR1O75312 459 aa8.43□□□□□ -1.06
SDCBPP1-201ENST00000440192 PPP1R18Q6NYC8 613 aa8.43□□□□□ -1.06
SDCBPP1-201ENST00000440192 BLOC1S3Q6QNY0 202 aa8.43□□□□□ -1.06
SDCBPP1-201ENST00000440192 GPR37O15354 613 aa8.42□□□□□ -1.06
SDCBPP1-201ENST00000440192 NKX2-3Q8TAU0 364 aa8.42□□□□□ -1.06
SDCBPP1-201ENST00000440192 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.42□□□□□ -1.06
SDCBPP1-201ENST00000440192 ACTN4O43707 911 aaKnown RBP8.41□□□□□ -1.06
SDCBPP1-201ENST00000440192 RDH13Q8NBN7 331 aa8.41□□□□□ -1.06
SDCBPP1-201ENST00000440192 DAXXQ9UER7 740 aaPredicted RBP8.4□□□□□ -1.06
SDCBPP1-201ENST00000440192 DDX11L8A8MPP1 907 aa8.39□□□□□ -1.07
SDCBPP1-201ENST00000440192 SLC10A3P09131 477 aa8.39□□□□□ -1.07
SDCBPP1-201ENST00000440192 PRKD2Q9BZL6 878 aa8.39□□□□□ -1.07
SDCBPP1-201ENST00000440192 NR1I2O75469 434 aa8.38□□□□□ -1.07
SDCBPP1-201ENST00000440192 SULF1Q8IWU6 871 aa8.38□□□□□ -1.07
SDCBPP1-201ENST00000440192 TPRNQ4KMQ1 711 aa8.37□□□□□ -1.07
SDCBPP1-201ENST00000440192 NLRP7Q8WX94 980 aa8.37□□□□□ -1.07
SDCBPP1-201ENST00000440192 TMUB1Q9BVT8 246 aa8.37□□□□□ -1.07
SDCBPP1-201ENST00000440192 TLL1O43897 1013 aa8.35□□□□□ -1.07
SDCBPP1-201ENST00000440192 MAP2K5Q13163 448 aa8.35□□□□□ -1.07
SDCBPP1-201ENST00000440192 V9GY48 417 aaPredicted RBP8.35□□□□□ -1.07
SDCBPP1-201ENST00000440192 LAPTM4AQ15012 233 aa8.33□□□□□ -1.08
SDCBPP1-201ENST00000440192 PUS10Q3MIT2 529 aaKnown RBP8.33□□□□□ -1.08
SDCBPP1-201ENST00000440192 Q6ZNB5 142 aa8.33□□□□□ -1.08
SDCBPP1-201ENST00000440192 ADH1BP00325 375 aa8.32□□□□□ -1.08
SDCBPP1-201ENST00000440192 SCUBE3Q8IX30 993 aa8.32□□□□□ -1.08
SDCBPP1-201ENST00000440192 PHOX2BQ99453 314 aa8.32□□□□□ -1.08
SDCBPP1-201ENST00000440192 MINK1Q8N4C8 1332 aaPredicted RBP8.31□□□□□ -1.08
SDCBPP1-201ENST00000440192 RNF223E7ERA6 249 aa8.31□□□□□ -1.08
SDCBPP1-201ENST00000440192 IRF6O14896 467 aa8.31□□□□□ -1.08
SDCBPP1-201ENST00000440192 GFRA3O60609 400 aa8.31□□□□□ -1.08
SDCBPP1-201ENST00000440192 S1PR4O95977 384 aa8.3□□□□□ -1.08
SDCBPP1-201ENST00000440192 ATP6V1AP38606 617 aa8.3□□□□□ -1.08
SDCBPP1-201ENST00000440192 FUT2Q10981 343 aa8.3□□□□□ -1.08
SDCBPP1-201ENST00000440192 GRIPAP1Q4V328 841 aa8.3□□□□□ -1.08
SDCBPP1-201ENST00000440192 KRI1Q8N9T8 703 aaKnown RBP8.3□□□□□ -1.08
SDCBPP1-201ENST00000440192 SLC6A16Q9GZN6 736 aa8.3□□□□□ -1.08
SDCBPP1-201ENST00000440192 GCGRP47871 477 aa8.29□□□□□ -1.08
SDCBPP1-201ENST00000440192 SPSB2Q99619 263 aa8.29□□□□□ -1.08
SDCBPP1-201ENST00000440192 MDM2Q00987 491 aaPredicted RBP8.28□□□□□ -1.08
SDCBPP1-201ENST00000440192 LMOD2Q6P5Q4 547 aa8.28□□□□□ -1.08
SDCBPP1-201ENST00000440192 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.28□□□□□ -1.08
SDCBPP1-201ENST00000440192 ANKLE1Q8NAG6 615 aa8.28□□□□□ -1.08
SDCBPP1-201ENST00000440192 PPEF1O14829 653 aaPredicted RBP8.27□□□□□ -1.09
SDCBPP1-201ENST00000440192 SLC19A1P41440 591 aa8.27□□□□□ -1.09
SDCBPP1-201ENST00000440192 MORN1Q5T089 497 aa8.27□□□□□ -1.09
SDCBPP1-201ENST00000440192 CCDC102AQ96A19 550 aa8.27□□□□□ -1.09
SDCBPP1-201ENST00000440192 FMNL1O95466 1100 aaPredicted RBP8.26□□□□□ -1.09
SDCBPP1-201ENST00000440192 PDZRN3Q9UPQ7 1066 aa8.25□□□□□ -1.09
SDCBPP1-201ENST00000440192 NRG2O14511 850 aaPredicted RBP8.24□□□□□ -1.09
SDCBPP1-201ENST00000440192 CLCN1P35523 988 aa8.24□□□□□ -1.09
SDCBPP1-201ENST00000440192 SLC27A5Q9Y2P5 690 aa8.24□□□□□ -1.09
SDCBPP1-201ENST00000440192 CD46P15529 392 aa8.23□□□□□ -1.09
SDCBPP1-201ENST00000440192 GPCPD1Q9NPB8 672 aa8.23□□□□□ -1.09
SDCBPP1-201ENST00000440192 KDM4AO75164 1064 aa8.22□□□□□ -1.09
SDCBPP1-201ENST00000440192 Q3C1V9 767 aa8.21□□□□□ -1.1
SDCBPP1-201ENST00000440192 SPRYD7Q5W111 196 aa8.21□□□□□ -1.1
SDCBPP1-201ENST00000440192 USP46P62068 366 aa8.2□□□□□ -1.1
SDCBPP1-201ENST00000440192 ZNF598Q86UK7 904 aaKnown RBP8.2□□□□□ -1.1
SDCBPP1-201ENST00000440192 SALL2Q9Y467 1007 aaPredicted RBP8.2□□□□□ -1.1
SDCBPP1-201ENST00000440192 ZNF697Q5TEC3 545 aa8.19□□□□□ -1.1
SDCBPP1-201ENST00000440192 TRAF7Q6Q0C0 670 aa8.19□□□□□ -1.1
SDCBPP1-201ENST00000440192 LIAT1Q6ZQX7 453 aa8.19□□□□□ -1.1
SDCBPP1-201ENST00000440192 THAP11Q96EK4 314 aa8.19□□□□□ -1.1
SDCBPP1-201ENST00000440192 TTLL12Q14166 644 aaPredicted RBP8.18□□□□□ -1.1
SDCBPP1-201ENST00000440192 BRICD5Q6PL45 260 aa8.18□□□□□ -1.1
SDCBPP1-201ENST00000440192 RNF19BQ6ZMZ0 732 aa8.18□□□□□ -1.1
SDCBPP1-201ENST00000440192 NUTM1Q86Y26 1132 aa8.18□□□□□ -1.1
SDCBPP1-201ENST00000440192 ZC3H15Q8WU90 426 aaKnown RBP8.18□□□□□ -1.1
SDCBPP1-201ENST00000440192 FAM217BQ9NTX9 383 aaPredicted RBP8.18□□□□□ -1.1
SDCBPP1-201ENST00000440192 FCF1Q9Y324 198 aaKnown RBP8.18□□□□□ -1.1
SDCBPP1-201ENST00000440192 BARGINQ6ZT62 677 aa8.17□□□□□ -1.1
SDCBPP1-201ENST00000440192 FAM160A2Q8N612 972 aaPredicted RBP8.17□□□□□ -1.1
SDCBPP1-201ENST00000440192 EMID1Q96A84 441 aaPredicted RBP8.17□□□□□ -1.1
SDCBPP1-201ENST00000440192 ZBTB24O43167 697 aaPredicted RBP8.16□□□□□ -1.1
SDCBPP1-201ENST00000440192 ZMYND10O75800 440 aa8.16□□□□□ -1.1
SDCBPP1-201ENST00000440192 PLA2G2CQ5R387 149 aa8.16□□□□□ -1.1
SDCBPP1-201ENST00000440192 PRDM9Q9NQV7 894 aa8.16□□□□□ -1.1
SDCBPP1-201ENST00000440192 CD2BP2O95400 341 aaKnown RBP8.15□□□□□ -1.1
SDCBPP1-201ENST00000440192 MSS51Q4VC12 460 aa8.15□□□□□ -1.1
SDCBPP1-201ENST00000440192 HOXA2O43364 376 aa8.14□□□□□ -1.11
SDCBPP1-201ENST00000440192 RPIAP49247 311 aa8.14□□□□□ -1.11
SDCBPP1-201ENST00000440192 PKDCCQ504Y2 493 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms