RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 KTN1Q86UP2 1357 aaKnown RBP10.63□□□□□ -0.71
APP-209ENST00000440126 POGZQ7Z3K3 1410 aa10.63□□□□□ -0.71
APP-209ENST00000440126 MADDQ8WXG6 1647 aa10.63□□□□□ -0.71
APP-209ENST00000440126 TET3O43151 1660 aa10.63□□□□□ -0.71
APP-209ENST00000440126 PPRC1Q5VV67 1664 aaKnown RBP10.63□□□□□ -0.71
APP-209ENST00000440126 PTPRTO14522 1441 aa10.62□□□□□ -0.71
APP-209ENST00000440126 DEKP35659 375 aaKnown RBP10.62□□□□□ -0.71
APP-209ENST00000440126 NOS1P29475 1434 aa10.62□□□□□ -0.71
APP-209ENST00000440126 YEATS2Q9ULM3 1422 aa10.62□□□□□ -0.71
APP-209ENST00000440126 DEPDC5O75140 1603 aa10.62□□□□□ -0.71
APP-209ENST00000440126 TSPOAP1O95153 1857 aa10.62□□□□□ -0.71
APP-209ENST00000440126 RBM19Q9Y4C8 960 aaKnown RBP10.61□□□□□ -0.71
APP-209ENST00000440126 NPATQ14207 1427 aa10.61□□□□□ -0.71
APP-209ENST00000440126 FRMPD1Q5SYB0 1578 aa10.61□□□□□ -0.71
APP-209ENST00000440126 TNNT2P45379 298 aaPredicted RBP10.61□□□□□ -0.71
APP-209ENST00000440126 RALBP1Q15311 655 aa10.61□□□□□ -0.71
APP-209ENST00000440126 MROH2AA6NES4 1674 aa10.61□□□□□ -0.71
APP-209ENST00000440126 MSH5O43196 834 aa10.6□□□□□ -0.71
APP-209ENST00000440126 CDCA7LQ96GN5 454 aa10.6□□□□□ -0.71
APP-209ENST00000440126 ABCA6Q8N139 1617 aa10.6□□□□□ -0.71
APP-209ENST00000440126 A0A0U1RQG5 324 aaPredicted RBP10.6□□□□□ -0.71
APP-209ENST00000440126 NLRP13Q86W25 1043 aa10.6□□□□□ -0.71
APP-209ENST00000440126 EIF2AK4Q9P2K8 1649 aaKnown RBP10.6□□□□□ -0.71
APP-209ENST00000440126 FBXO31Q5XUX0 539 aaPredicted RBP10.59□□□□□ -0.71
APP-209ENST00000440126 STK26Q9P289 416 aa10.59□□□□□ -0.71
APP-209ENST00000440126 KNSTRNQ9Y448 316 aa10.59□□□□□ -0.71
APP-209ENST00000440126 EFCAB6Q5THR3 1501 aa10.59□□□□□ -0.71
APP-209ENST00000440126 VWDEQ8N2E2 1590 aa10.59□□□□□ -0.71
APP-209ENST00000440126 PARD3Q8TEW0 1356 aa10.58□□□□□ -0.72
APP-209ENST00000440126 PLPPR3Q6T4P5 718 aa10.57□□□□□ -0.72
APP-209ENST00000440126 RNF17Q9BXT8 1623 aaKnown RBP10.57□□□□□ -0.72
APP-209ENST00000440126 HECW2Q9P2P5 1572 aa10.57□□□□□ -0.72
APP-209ENST00000440126 SCAF11Q99590 1463 aaKnown RBP10.57□□□□□ -0.72
APP-209ENST00000440126 NUDCQ9Y266 331 aa10.57□□□□□ -0.72
APP-209ENST00000440126 BRD4O60885 1362 aaPredicted RBP10.57□□□□□ -0.72
APP-209ENST00000440126 CCDC146Q8IYE0 955 aa10.57□□□□□ -0.72
APP-209ENST00000440126 KIF1BO60333 1816 aa10.56□□□□□ -0.72
APP-209ENST00000440126 IDI1Q13907 227 aa10.56□□□□□ -0.72
APP-209ENST00000440126 ADAMTS8Q9UP79 889 aa10.56□□□□□ -0.72
APP-209ENST00000440126 IQGAP1P46940 1657 aa10.55□□□□□ -0.72
APP-209ENST00000440126 PPP2R1AP30153 589 aa10.55□□□□□ -0.72
APP-209ENST00000440126 SLC12A5Q9H2X9 1139 aa10.55□□□□□ -0.72
APP-209ENST00000440126 MLH3Q9UHC1 1453 aa10.55□□□□□ -0.72
APP-209ENST00000440126 AMER1Q5JTC6 1135 aaPredicted RBP10.54□□□□□ -0.72
APP-209ENST00000440126 CARD14Q9BXL6 1004 aa10.54□□□□□ -0.72
APP-209ENST00000440126 IL27Q8NEV9 243 aa10.54□□□□□ -0.72
APP-209ENST00000440126 LRPPRCP42704 1394 aaKnown RBP10.54□□□□□ -0.72
APP-209ENST00000440126 RIMBP3CA6NJZ7 1639 aa10.54□□□□□ -0.72
APP-209ENST00000440126 RIMBP3BA6NNM3 1639 aa10.54□□□□□ -0.72
APP-209ENST00000440126 RIMBP3Q9UFD9 1639 aa10.54□□□□□ -0.72
APP-209ENST00000440126 SIGLEC1Q9BZZ2 1709 aa10.53□□□□□ -0.72
APP-209ENST00000440126 PLIN1O60240 522 aa10.53□□□□□ -0.72
APP-209ENST00000440126 ABCC3O15438 1527 aa10.53□□□□□ -0.72
APP-209ENST00000440126 MAP3K4Q9Y6R4 1608 aa10.53□□□□□ -0.72
APP-209ENST00000440126 LAMC1P11047 1609 aa10.53□□□□□ -0.72
APP-209ENST00000440126 CENPJQ9HC77 1338 aaPredicted RBP10.52□□□□□ -0.72
APP-209ENST00000440126 DIP2CQ9Y2E4 1556 aa10.52□□□□□ -0.72
APP-209ENST00000440126 SMG6Q86US8 1419 aaKnown RBP10.52□□□□□ -0.73
APP-209ENST00000440126 PPP4R2Q9NY27 417 aa10.52□□□□□ -0.73
APP-209ENST00000440126 STAG3Q9UJ98 1225 aa10.52□□□□□ -0.73
APP-209ENST00000440126 ERVK-7P63135 1459 aa10.51□□□□□ -0.73
APP-209ENST00000440126 EIF3AQ14152 1382 aaKnown RBP10.51□□□□□ -0.73
APP-209ENST00000440126 CABP2Q9NPB3 220 aa10.51□□□□□ -0.73
APP-209ENST00000440126 WDR43Q15061 677 aaKnown RBP eCLIP10.5□□□□□ -0.73
APP-209ENST00000440126 KLHL34Q8N239 644 aa10.5□□□□□ -0.73
APP-209ENST00000440126 NEO1Q92859 1461 aa10.5□□□□□ -0.73
APP-209ENST00000440126 CFAP74Q9C0B2 1584 aa10.5□□□□□ -0.73
APP-209ENST00000440126 CDCA8Q53HL2 280 aa10.49□□□□□ -0.73
APP-209ENST00000440126 C14orf93Q9H972 538 aaKnown RBP10.49□□□□□ -0.73
APP-209ENST00000440126 RICTORQ6R327 1708 aa10.49□□□□□ -0.73
APP-209ENST00000440126 ADGRB3O60242 1522 aa10.49□□□□□ -0.73
APP-209ENST00000440126 CAMSAP1Q5T5Y3 1602 aa10.49□□□□□ -0.73
APP-209ENST00000440126 MINK1Q8N4C8 1332 aaPredicted RBP10.49□□□□□ -0.73
APP-209ENST00000440126 NEUROD2Q15784 382 aa10.48□□□□□ -0.73
APP-209ENST00000440126 SYNMO15061 1565 aa10.48□□□□□ -0.73
APP-209ENST00000440126 EXOC6Q8TAG9 804 aa10.48□□□□□ -0.73
APP-209ENST00000440126 MYOM1P52179 1685 aa10.48□□□□□ -0.73
APP-209ENST00000440126 MYO5BQ9ULV0 1848 aa10.48□□□□□ -0.73
APP-209ENST00000440126 SKAP1Q86WV1 359 aa10.48□□□□□ -0.73
APP-209ENST00000440126 RCAN3Q9UKA8 241 aa10.48□□□□□ -0.73
APP-209ENST00000440126 MYOM2P54296 1465 aa10.48□□□□□ -0.73
APP-209ENST00000440126 IFT172Q9UG01 1749 aa10.47□□□□□ -0.73
APP-209ENST00000440126 LMTK2Q8IWU2 1503 aa10.47□□□□□ -0.73
APP-209ENST00000440126 PIK3C2GO75747 1445 aa10.47□□□□□ -0.73
APP-209ENST00000440126 FANCIQ9NVI1 1328 aa10.47□□□□□ -0.73
APP-209ENST00000440126 PDE4CQ08493 712 aa10.47□□□□□ -0.73
APP-209ENST00000440126 RRP7AQ9Y3A4 280 aaKnown RBP10.46□□□□□ -0.73
APP-209ENST00000440126 KDM5AP29375 1690 aaKnown RBP10.46□□□□□ -0.73
APP-209ENST00000440126 NSD3Q9BZ95 1437 aa10.46□□□□□ -0.74
APP-209ENST00000440126 PPLO60437 1756 aa10.46□□□□□ -0.74
APP-209ENST00000440126 PLEKHH1Q9ULM0 1364 aa10.46□□□□□ -0.74
APP-209ENST00000440126 APAF1O14727 1248 aa10.46□□□□□ -0.74
APP-209ENST00000440126 SRPK2P78362 688 aaKnown RBP10.46□□□□□ -0.74
APP-209ENST00000440126 ASXL1Q8IXJ9 1541 aa10.46□□□□□ -0.74
APP-209ENST00000440126 VGFO15240 615 aaPredicted RBP10.45□□□□□ -0.74
APP-209ENST00000440126 STAC3Q96MF2 364 aa10.45□□□□□ -0.74
APP-209ENST00000440126 RRP1P56182 461 aaKnown RBP10.44□□□□□ -0.74
APP-209ENST00000440126 MORC1Q86VD1 984 aa10.44□□□□□ -0.74
APP-209ENST00000440126 PRAM1Q96QH2 718 aa10.44□□□□□ -0.74
APP-209ENST00000440126 DMRT2Q9Y5R5 561 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms