RNA–Protein interactions for RNA: ENST00000440014.6

PDE4A-204, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-204ENST00000440014 ZMYM4Q5VZL5 1548 aa17.34■□□□□ 0.37
PDE4A-204ENST00000440014 EIF5BO60841 1220 aaKnown RBP17.33■□□□□ 0.37
PDE4A-204ENST00000440014 FRAT1Q92837 279 aaPredicted RBP17.33■□□□□ 0.37
PDE4A-204ENST00000440014 CCDC141Q6ZP82 1450 aa17.33■□□□□ 0.36
PDE4A-204ENST00000440014 KDM2BQ8NHM5 1336 aa17.33■□□□□ 0.36
PDE4A-204ENST00000440014 PER1O15534 1290 aaPredicted RBP17.32■□□□□ 0.36
PDE4A-204ENST00000440014 MAGI2Q86UL8 1455 aa17.31■□□□□ 0.36
PDE4A-204ENST00000440014 MLH3Q9UHC1 1453 aa17.3■□□□□ 0.36
PDE4A-204ENST00000440014 C20orf194Q5TEA3 1177 aa17.3■□□□□ 0.36
PDE4A-204ENST00000440014 CENPQQ7L2Z9 268 aaPredicted RBP17.3■□□□□ 0.36
PDE4A-204ENST00000440014 KDM5DQ9BY66 1539 aa17.3■□□□□ 0.36
PDE4A-204ENST00000440014 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
PDE4A-204ENST00000440014 FAM161AQ3B820 660 aa17.29■□□□□ 0.36
PDE4A-204ENST00000440014 SPAG9O60271 1321 aaKnown RBP17.29■□□□□ 0.36
PDE4A-204ENST00000440014 HECW2Q9P2P5 1572 aa17.28■□□□□ 0.36
PDE4A-204ENST00000440014 TSPY4P0CV99 314 aa17.27■□□□□ 0.36
PDE4A-204ENST00000440014 TSPY10P0CW01 314 aa17.27■□□□□ 0.36
PDE4A-204ENST00000440014 RTEL1-TNFRSF6BF6WH68 1400 aa17.27■□□□□ 0.36
PDE4A-204ENST00000440014 C8orf34Q49A92 452 aa17.27■□□□□ 0.35
PDE4A-204ENST00000440014 C9orf84Q5VXU9 1444 aa17.27■□□□□ 0.35
PDE4A-204ENST00000440014 SHANK2Q9UPX8 1470 aa17.26■□□□□ 0.35
PDE4A-204ENST00000440014 ZFYVE16Q7Z3T8 1539 aa17.26■□□□□ 0.35
PDE4A-204ENST00000440014 INO80Q9ULG1 1556 aaPredicted RBP17.26■□□□□ 0.35
PDE4A-204ENST00000440014 TRPM1Q7Z4N2 1603 aa17.26■□□□□ 0.35
PDE4A-204ENST00000440014 PRAG1Q86YV5 1406 aa17.26■□□□□ 0.35
PDE4A-204ENST00000440014 MAST1Q9Y2H9 1570 aa17.26■□□□□ 0.35
PDE4A-204ENST00000440014 YEATS2Q9ULM3 1422 aa17.25■□□□□ 0.35
PDE4A-204ENST00000440014 ATP7AQ04656 1500 aa17.25■□□□□ 0.35
PDE4A-204ENST00000440014 KIDINS220Q9ULH0 1771 aa17.25■□□□□ 0.35
PDE4A-204ENST00000440014 ARHGEF40Q8TER5 1519 aa17.24■□□□□ 0.35
PDE4A-204ENST00000440014 FRAT2O75474 233 aaPredicted RBP17.23■□□□□ 0.35
PDE4A-204ENST00000440014 PANK3Q9H999 370 aa17.22■□□□□ 0.35
PDE4A-204ENST00000440014 DISP3Q9P2K9 1392 aa17.22■□□□□ 0.35
PDE4A-204ENST00000440014 NBPF1Q3BBV0 1214 aa17.21■□□□□ 0.35
PDE4A-204ENST00000440014 DIP2CQ9Y2E4 1556 aa17.21■□□□□ 0.35
PDE4A-204ENST00000440014 ABCA6Q8N139 1617 aa17.21■□□□□ 0.35
PDE4A-204ENST00000440014 ATP10AO60312 1499 aa17.21■□□□□ 0.35
PDE4A-204ENST00000440014 GPRASP1Q5JY77 1395 aa17.2■□□□□ 0.34
PDE4A-204ENST00000440014 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
PDE4A-204ENST00000440014 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.2■□□□□ 0.34
PDE4A-204ENST00000440014 DUSP27Q5VZP5 1158 aa17.19■□□□□ 0.34
PDE4A-204ENST00000440014 RGS3P49796 1198 aa17.19■□□□□ 0.34
PDE4A-204ENST00000440014 TESK2Q96S53 571 aa17.19■□□□□ 0.34
PDE4A-204ENST00000440014 CCDC144AA2RUR9 1427 aa17.18■□□□□ 0.34
PDE4A-204ENST00000440014 PLXNC1O60486 1568 aa17.18■□□□□ 0.34
PDE4A-204ENST00000440014 ERBINQ96RT1 1412 aa17.17■□□□□ 0.34
PDE4A-204ENST00000440014 PLEKHH1Q9ULM0 1364 aa17.17■□□□□ 0.34
PDE4A-204ENST00000440014 PRDM15P57071 1507 aaPredicted RBP17.17■□□□□ 0.34
PDE4A-204ENST00000440014 REREQ9P2R6 1566 aa17.17■□□□□ 0.34
PDE4A-204ENST00000440014 LAMC1P11047 1609 aa17.17■□□□□ 0.34
PDE4A-204ENST00000440014 RGL3Q3MIN7 710 aa17.16■□□□□ 0.34
PDE4A-204ENST00000440014 FAM43AQ8N2R8 423 aa17.16■□□□□ 0.34
PDE4A-204ENST00000440014 FAM135AQ9P2D6 1515 aa17.16■□□□□ 0.34
PDE4A-204ENST00000440014 TMF1P82094 1093 aa17.15■□□□□ 0.34
PDE4A-204ENST00000440014 GOLGA2Q08379 1002 aa17.15■□□□□ 0.34
PDE4A-204ENST00000440014 WDR43Q15061 677 aaKnown RBP eCLIP17.15■□□□□ 0.34
PDE4A-204ENST00000440014 A2MP01023 1474 aa17.15■□□□□ 0.34
PDE4A-204ENST00000440014 ZNF521Q96K83 1311 aa17.13■□□□□ 0.33
PDE4A-204ENST00000440014 RSPH6AQ9H0K4 717 aa17.13■□□□□ 0.33
PDE4A-204ENST00000440014 DUOX2Q9NRD8 1548 aa17.12■□□□□ 0.33
PDE4A-204ENST00000440014 AGLP35573 1532 aa17.12■□□□□ 0.33
PDE4A-204ENST00000440014 SIGLEC1Q9BZZ2 1709 aa17.11■□□□□ 0.33
PDE4A-204ENST00000440014 PPP2R1AP30153 589 aa17.1■□□□□ 0.33
PDE4A-204ENST00000440014 EIF2AK4Q9P2K8 1649 aaKnown RBP17.1■□□□□ 0.33
PDE4A-204ENST00000440014 EIF3AQ14152 1382 aaKnown RBP17.1■□□□□ 0.33
PDE4A-204ENST00000440014 SLFN5Q08AF3 891 aa17.09■□□□□ 0.33
PDE4A-204ENST00000440014 KNSTRNQ9Y448 316 aa17.08■□□□□ 0.32
PDE4A-204ENST00000440014 PLA2R1Q13018 1463 aa17.07■□□□□ 0.32
PDE4A-204ENST00000440014 VIRMAQ69YN4 1812 aaKnown RBP17.07■□□□□ 0.32
PDE4A-204ENST00000440014 USP19O94966 1318 aa17.06■□□□□ 0.32
PDE4A-204ENST00000440014 POGKQ9P215 609 aa17.06■□□□□ 0.32
PDE4A-204ENST00000440014 BECN1Q14457 450 aa17.05■□□□□ 0.32
PDE4A-204ENST00000440014 TRMT2AQ8IZ69 625 aaKnown RBP17.05■□□□□ 0.32
PDE4A-204ENST00000440014 NKTRP30414 1462 aaKnown RBP17.04■□□□□ 0.32
PDE4A-204ENST00000440014 KIF3BO15066 747 aa17.04■□□□□ 0.32
PDE4A-204ENST00000440014 IGHDP01880 384 aa17.03■□□□□ 0.32
PDE4A-204ENST00000440014 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
PDE4A-204ENST00000440014 PKNOX2Q96KN3 472 aa17.03■□□□□ 0.32
PDE4A-204ENST00000440014 BCAR3O75815 825 aa17.02■□□□□ 0.32
PDE4A-204ENST00000440014 MAPK8IP3Q9UPT6 1336 aa17.01■□□□□ 0.31
PDE4A-204ENST00000440014 UNC13BO14795 1591 aa17.01■□□□□ 0.31
PDE4A-204ENST00000440014 L1TD1Q5T7N2 865 aaKnown RBP17.01■□□□□ 0.31
PDE4A-204ENST00000440014 CCDC146Q8IYE0 955 aa17.01■□□□□ 0.31
PDE4A-204ENST00000440014 PIK3C2GO75747 1445 aa17.01■□□□□ 0.31
PDE4A-204ENST00000440014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
PDE4A-204ENST00000440014 SPINK5Q9NQ38 1064 aaPredicted RBP17.01■□□□□ 0.31
PDE4A-204ENST00000440014 RNF17Q9BXT8 1623 aaKnown RBP17■□□□□ 0.31
PDE4A-204ENST00000440014 MLECQ14165 292 aa17■□□□□ 0.31
PDE4A-204ENST00000440014 SLKQ9H2G2 1235 aaPredicted RBP17■□□□□ 0.31
PDE4A-204ENST00000440014 SEC24BO95487 1268 aa16.99■□□□□ 0.31
PDE4A-204ENST00000440014 CGNL1Q0VF96 1302 aa16.99■□□□□ 0.31
PDE4A-204ENST00000440014 GGT6Q6P531 493 aa16.98■□□□□ 0.31
PDE4A-204ENST00000440014 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
PDE4A-204ENST00000440014 E9PSI1 815 aa16.98■□□□□ 0.31
PDE4A-204ENST00000440014 APAF1O14727 1248 aa16.98■□□□□ 0.31
PDE4A-204ENST00000440014 ADAMTSL3P82987 1691 aa16.98■□□□□ 0.31
PDE4A-204ENST00000440014 ASXL1Q8IXJ9 1541 aa16.98■□□□□ 0.31
PDE4A-204ENST00000440014 SYNMO15061 1565 aa16.97■□□□□ 0.31
PDE4A-204ENST00000440014 DEPDC5O75140 1603 aa16.97■□□□□ 0.31
PDE4A-204ENST00000440014 MROH1Q8NDA8 1641 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms