RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 DISP3Q9P2K9 1392 aa20.59■□□□□ 0.89
CPSF7-205ENST00000439958 TMC1Q8TDI8 760 aa20.58■□□□□ 0.88
CPSF7-205ENST00000439958 BCORL1Q5H9F3 1711 aa20.57■□□□□ 0.88
CPSF7-205ENST00000439958 KIF13AQ9H1H9 1805 aa20.57■□□□□ 0.88
CPSF7-205ENST00000439958 TESK2Q96S53 571 aa20.57■□□□□ 0.88
CPSF7-205ENST00000439958 PANK3Q9H999 370 aa20.57■□□□□ 0.88
CPSF7-205ENST00000439958 STAC3Q96MF2 364 aa20.54■□□□□ 0.88
CPSF7-205ENST00000439958 TRPM1Q7Z4N2 1603 aa20.54■□□□□ 0.88
CPSF7-205ENST00000439958 LMTK2Q8IWU2 1503 aa20.52■□□□□ 0.88
CPSF7-205ENST00000439958 EIF3AQ14152 1382 aaKnown RBP20.52■□□□□ 0.88
CPSF7-205ENST00000439958 KIF1BO60333 1816 aa20.52■□□□□ 0.87
CPSF7-205ENST00000439958 CAMSAP1Q5T5Y3 1602 aa20.52■□□□□ 0.87
CPSF7-205ENST00000439958 GPRASP1Q5JY77 1395 aa20.51■□□□□ 0.87
CPSF7-205ENST00000439958 ZMYM4Q5VZL5 1548 aa20.49■□□□□ 0.87
CPSF7-205ENST00000439958 POGKQ9P215 609 aa20.49■□□□□ 0.87
CPSF7-205ENST00000439958 ZMYM3Q14202 1370 aa20.49■□□□□ 0.87
CPSF7-205ENST00000439958 KNSTRNQ9Y448 316 aa20.48■□□□□ 0.87
CPSF7-205ENST00000439958 CDCA8Q53HL2 280 aa20.48■□□□□ 0.87
CPSF7-205ENST00000439958 CENPJQ9HC77 1338 aaPredicted RBP20.48■□□□□ 0.87
CPSF7-205ENST00000439958 SCAF11Q99590 1463 aaKnown RBP20.48■□□□□ 0.87
CPSF7-205ENST00000439958 SALL2Q9Y467 1007 aaPredicted RBP20.48■□□□□ 0.87
CPSF7-205ENST00000439958 C14orf93Q9H972 538 aaKnown RBP20.47■□□□□ 0.87
CPSF7-205ENST00000439958 RPGRIP1LQ68CZ1 1315 aa20.47■□□□□ 0.87
CPSF7-205ENST00000439958 MADDQ8WXG6 1647 aa20.46■□□□□ 0.87
CPSF7-205ENST00000439958 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
CPSF7-205ENST00000439958 MROH2AA6NES4 1674 aa20.45■□□□□ 0.86
CPSF7-205ENST00000439958 MINK1Q8N4C8 1332 aaPredicted RBP20.44■□□□□ 0.86
CPSF7-205ENST00000439958 SIGLEC1Q9BZZ2 1709 aa20.43■□□□□ 0.86
CPSF7-205ENST00000439958 SYNMO15061 1565 aa20.43■□□□□ 0.86
CPSF7-205ENST00000439958 TNNT2P45379 298 aaPredicted RBP20.43■□□□□ 0.86
CPSF7-205ENST00000439958 SRPK2P78362 688 aaKnown RBP20.43■□□□□ 0.86
CPSF7-205ENST00000439958 PPP6R1Q9UPN7 881 aa20.43■□□□□ 0.86
CPSF7-205ENST00000439958 CLTCQ00610 1675 aaKnown RBP20.42■□□□□ 0.86
CPSF7-205ENST00000439958 ARHGAP31Q2M1Z3 1444 aa20.41■□□□□ 0.86
CPSF7-205ENST00000439958 ADGRB3O60242 1522 aa20.41■□□□□ 0.86
CPSF7-205ENST00000439958 KTN1Q86UP2 1357 aaKnown RBP20.41■□□□□ 0.86
CPSF7-205ENST00000439958 ERVK-7P63135 1459 aa20.41■□□□□ 0.86
CPSF7-205ENST00000439958 ARHGEF40Q8TER5 1519 aa20.4■□□□□ 0.86
CPSF7-205ENST00000439958 PRAM1Q96QH2 718 aa20.39■□□□□ 0.86
CPSF7-205ENST00000439958 CABP2Q9NPB3 220 aa20.39■□□□□ 0.86
CPSF7-205ENST00000439958 MYOM2P54296 1465 aa20.38■□□□□ 0.85
CPSF7-205ENST00000439958 SLC12A5Q9H2X9 1139 aa20.37■□□□□ 0.85
CPSF7-205ENST00000439958 PIK3C2GO75747 1445 aa20.36■□□□□ 0.85
CPSF7-205ENST00000439958 TNRQ92752 1358 aa20.36■□□□□ 0.85
CPSF7-205ENST00000439958 WAPLQ7Z5K2 1190 aa20.35■□□□□ 0.85
CPSF7-205ENST00000439958 RALBP1Q15311 655 aa20.34■□□□□ 0.85
CPSF7-205ENST00000439958 AGLP35573 1532 aa20.34■□□□□ 0.85
CPSF7-205ENST00000439958 SLC26A8Q96RN1 970 aa20.33■□□□□ 0.85
CPSF7-205ENST00000439958 MYBBP1AQ9BQG0 1328 aaKnown RBP20.33■□□□□ 0.85
CPSF7-205ENST00000439958 PREX1Q8TCU6 1659 aa20.33■□□□□ 0.85
CPSF7-205ENST00000439958 NUTM2FA1L443 756 aa20.32■□□□□ 0.84
CPSF7-205ENST00000439958 TXNDC2Q86VQ3 553 aa20.32■□□□□ 0.84
CPSF7-205ENST00000439958 ZC3H13Q5T200 1668 aaKnown RBP20.32■□□□□ 0.84
CPSF7-205ENST00000439958 PER1O15534 1290 aaPredicted RBP20.32■□□□□ 0.84
CPSF7-205ENST00000439958 RIMS2Q9UQ26 1411 aa20.31■□□□□ 0.84
CPSF7-205ENST00000439958 HDGFP51858 240 aaKnown RBP20.31■□□□□ 0.84
CPSF7-205ENST00000439958 EVC2Q86UK5 1308 aa20.3■□□□□ 0.84
CPSF7-205ENST00000439958 PIK3C2BO00750 1634 aa20.29■□□□□ 0.84
CPSF7-205ENST00000439958 NLRP13Q86W25 1043 aa20.29■□□□□ 0.84
CPSF7-205ENST00000439958 SLC24A1O60721 1099 aa20.28■□□□□ 0.84
CPSF7-205ENST00000439958 NEFLP07196 543 aa20.28■□□□□ 0.84
CPSF7-205ENST00000439958 EID1Q9Y6B2 187 aa20.28■□□□□ 0.84
CPSF7-205ENST00000439958 MYO5BQ9ULV0 1848 aa20.28■□□□□ 0.84
CPSF7-205ENST00000439958 NEXMIFQ5QGS0 1516 aa20.27■□□□□ 0.84
CPSF7-205ENST00000439958 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.27■□□□□ 0.84
CPSF7-205ENST00000439958 POLR1AO95602 1720 aaPredicted RBP20.26■□□□□ 0.83
CPSF7-205ENST00000439958 IRX6P78412 446 aaPredicted RBP20.26■□□□□ 0.83
CPSF7-205ENST00000439958 PPLO60437 1756 aa20.25■□□□□ 0.83
CPSF7-205ENST00000439958 A2ML1A8K2U0 1454 aa20.25■□□□□ 0.83
CPSF7-205ENST00000439958 FKBP8Q14318 412 aa20.24■□□□□ 0.83
CPSF7-205ENST00000439958 CARD14Q9BXL6 1004 aa20.23■□□□□ 0.83
CPSF7-205ENST00000439958 REREQ9P2R6 1566 aa20.23■□□□□ 0.83
CPSF7-205ENST00000439958 LAMC1P11047 1609 aa20.23■□□□□ 0.83
CPSF7-205ENST00000439958 LTKP29376 864 aa20.23■□□□□ 0.83
CPSF7-205ENST00000439958 PNISRQ8TF01 805 aaKnown RBP20.23■□□□□ 0.83
CPSF7-205ENST00000439958 NRXN1Q9ULB1 1477 aa20.23■□□□□ 0.83
CPSF7-205ENST00000439958 IQGAP1P46940 1657 aa20.23■□□□□ 0.83
CPSF7-205ENST00000439958 TMEM131LA2VDJ0 1609 aa20.22■□□□□ 0.83
CPSF7-205ENST00000439958 WDR43Q15061 677 aaKnown RBP eCLIP20.22■□□□□ 0.83
CPSF7-205ENST00000439958 MORC1Q86VD1 984 aa20.22■□□□□ 0.83
CPSF7-205ENST00000439958 YTHDC2Q9H6S0 1430 aaKnown RBP20.21■□□□□ 0.83
CPSF7-205ENST00000439958 SUPT16HQ9Y5B9 1047 aaKnown RBP20.21■□□□□ 0.83
CPSF7-205ENST00000439958 AMER1Q5JTC6 1135 aaPredicted RBP20.2■□□□□ 0.82
CPSF7-205ENST00000439958 CDK19Q9BWU1 502 aa20.2■□□□□ 0.82
CPSF7-205ENST00000439958 IFT172Q9UG01 1749 aa20.19■□□□□ 0.82
CPSF7-205ENST00000439958 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.19■□□□□ 0.82
CPSF7-205ENST00000439958 PPP2R1AP30153 589 aa20.18■□□□□ 0.82
CPSF7-205ENST00000439958 NEURL4Q96JN8 1562 aa20.18■□□□□ 0.82
CPSF7-205ENST00000439958 METP08581 1390 aa20.17■□□□□ 0.82
CPSF7-205ENST00000439958 ADGRB1O14514 1584 aa20.17■□□□□ 0.82
CPSF7-205ENST00000439958 THEMISQ8N1K5 641 aaPredicted RBP20.17■□□□□ 0.82
CPSF7-205ENST00000439958 NSD3Q9BZ95 1437 aa20.17■□□□□ 0.82
CPSF7-205ENST00000439958 CABP1Q9NZU7 370 aa20.17■□□□□ 0.82
CPSF7-205ENST00000439958 PLEKHH1Q9ULM0 1364 aa20.17■□□□□ 0.82
CPSF7-205ENST00000439958 PARD3Q8TEW0 1356 aa20.16■□□□□ 0.82
CPSF7-205ENST00000439958 TMEM2Q9UHN6 1383 aa20.16■□□□□ 0.82
CPSF7-205ENST00000439958 SPATA31D1Q6ZQQ2 1576 aa20.16■□□□□ 0.82
CPSF7-205ENST00000439958 BRD4O60885 1362 aaPredicted RBP20.16■□□□□ 0.82
CPSF7-205ENST00000439958 GGNBP2Q9H3C7 697 aa20.15■□□□□ 0.82
CPSF7-205ENST00000439958 PPM1GO15355 546 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms