RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 TMEM121BQ9BXQ6 578 aaPredicted RBP11.44□□□□□ -0.58
COPS3-203ENST00000439936 SIGLEC1Q9BZZ2 1709 aa11.44□□□□□ -0.58
COPS3-203ENST00000439936 MLECQ14165 292 aa11.43□□□□□ -0.58
COPS3-203ENST00000439936 DIP2CQ9Y2E4 1556 aa11.43□□□□□ -0.58
COPS3-203ENST00000439936 ABCA6Q8N139 1617 aa11.43□□□□□ -0.58
COPS3-203ENST00000439936 ATP7AQ04656 1500 aa11.43□□□□□ -0.58
COPS3-203ENST00000439936 ABCC5O15440 1437 aa11.42□□□□□ -0.58
COPS3-203ENST00000439936 C9orf84Q5VXU9 1444 aa11.42□□□□□ -0.58
COPS3-203ENST00000439936 PKD2Q13563 968 aa11.42□□□□□ -0.58
COPS3-203ENST00000439936 CHIC2Q9UKJ5 165 aa11.42□□□□□ -0.58
COPS3-203ENST00000439936 CHRM1P11229 460 aaPredicted RBP11.41□□□□□ -0.58
COPS3-203ENST00000439936 INO80Q9ULG1 1556 aaPredicted RBP11.41□□□□□ -0.58
COPS3-203ENST00000439936 DHX29Q7Z478 1369 aaKnown RBP11.4□□□□□ -0.58
COPS3-203ENST00000439936 DAPK1P53355 1430 aa11.4□□□□□ -0.58
COPS3-203ENST00000439936 BCORL1Q5H9F3 1711 aa11.4□□□□□ -0.58
COPS3-203ENST00000439936 RRP7BPQ9NSQ0 103 aa11.4□□□□□ -0.59
COPS3-203ENST00000439936 A2MP01023 1474 aa11.39□□□□□ -0.59
COPS3-203ENST00000439936 REREQ9P2R6 1566 aa11.39□□□□□ -0.59
COPS3-203ENST00000439936 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
COPS3-203ENST00000439936 DNMT1P26358 1616 aaKnown RBP11.39□□□□□ -0.59
COPS3-203ENST00000439936 ADAMTSL3P82987 1691 aa11.39□□□□□ -0.59
COPS3-203ENST00000439936 MAST1Q9Y2H9 1570 aa11.38□□□□□ -0.59
COPS3-203ENST00000439936 ADGBQ8N7X0 1667 aa11.38□□□□□ -0.59
COPS3-203ENST00000439936 KIF3BO15066 747 aa11.38□□□□□ -0.59
COPS3-203ENST00000439936 ITGAEP38570 1179 aa11.38□□□□□ -0.59
COPS3-203ENST00000439936 GGT6Q6P531 493 aa11.38□□□□□ -0.59
COPS3-203ENST00000439936 CIZ1Q9ULV3 898 aaPredicted RBP11.38□□□□□ -0.59
COPS3-203ENST00000439936 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.38□□□□□ -0.59
COPS3-203ENST00000439936 AGLP35573 1532 aa11.37□□□□□ -0.59
COPS3-203ENST00000439936 PTPRKQ15262 1439 aa11.36□□□□□ -0.59
COPS3-203ENST00000439936 RRBP1Q9P2E9 1410 aaKnown RBP11.36□□□□□ -0.59
COPS3-203ENST00000439936 CROCC2H7BZ55 1655 aa11.35□□□□□ -0.59
COPS3-203ENST00000439936 NCOA1Q15788 1441 aa11.35□□□□□ -0.59
COPS3-203ENST00000439936 SHANK2Q9UPX8 1470 aa11.34□□□□□ -0.59
COPS3-203ENST00000439936 ANKRD30AQ9BXX3 1397 aa11.34□□□□□ -0.59
COPS3-203ENST00000439936 PLXNC1O60486 1568 aa11.33□□□□□ -0.59
COPS3-203ENST00000439936 CEBPAP49715 358 aaPredicted RBP11.33□□□□□ -0.6
COPS3-203ENST00000439936 ZNF467Q7Z7K2 595 aaPredicted RBP11.33□□□□□ -0.6
COPS3-203ENST00000439936 ESF1Q9H501 851 aaKnown RBP11.33□□□□□ -0.6
COPS3-203ENST00000439936 MADDQ8WXG6 1647 aa11.33□□□□□ -0.6
COPS3-203ENST00000439936 KIF15Q9NS87 1388 aa11.32□□□□□ -0.6
COPS3-203ENST00000439936 RIMS1Q86UR5 1692 aaKnown RBP11.31□□□□□ -0.6
COPS3-203ENST00000439936 DUOX2Q9NRD8 1548 aa11.31□□□□□ -0.6
COPS3-203ENST00000439936 FER1L4A9Z1Z3 1794 aa11.31□□□□□ -0.6
COPS3-203ENST00000439936 ADGRL2O95490 1459 aa11.31□□□□□ -0.6
COPS3-203ENST00000439936 PTPRMP28827 1452 aa11.31□□□□□ -0.6
COPS3-203ENST00000439936 PSEN1P49768 467 aa11.29□□□□□ -0.6
COPS3-203ENST00000439936 GOLGA2Q08379 1002 aa11.28□□□□□ -0.6
COPS3-203ENST00000439936 L3MBTL3Q96JM7 780 aaPredicted RBP11.28□□□□□ -0.6
COPS3-203ENST00000439936 ROCK1Q13464 1354 aa11.28□□□□□ -0.6
COPS3-203ENST00000439936 ZMYM3Q14202 1370 aa11.28□□□□□ -0.6
COPS3-203ENST00000439936 WASHC2CQ9Y4E1 1318 aa11.28□□□□□ -0.6
COPS3-203ENST00000439936 SETD1BQ9UPS6 1966 aaKnown RBP11.27□□□□□ -0.6
COPS3-203ENST00000439936 ERBINQ96RT1 1412 aa11.26□□□□□ -0.61
COPS3-203ENST00000439936 CNTLNQ9NXG0 1405 aa11.26□□□□□ -0.61
COPS3-203ENST00000439936 ANKRD50Q9ULJ7 1429 aa11.26□□□□□ -0.61
COPS3-203ENST00000439936 MKRN3Q13064 507 aaKnown RBP11.26□□□□□ -0.61
COPS3-203ENST00000439936 C3orf67Q6ZVT6 689 aa11.26□□□□□ -0.61
COPS3-203ENST00000439936 EIF2AK4Q9P2K8 1649 aaKnown RBP11.26□□□□□ -0.61
COPS3-203ENST00000439936 CLTCQ00610 1675 aaKnown RBP11.25□□□□□ -0.61
COPS3-203ENST00000439936 ECM2O94769 699 aaPredicted RBP11.25□□□□□ -0.61
COPS3-203ENST00000439936 CFAP65Q6ZU64 1925 aaKnown RBP11.25□□□□□ -0.61
COPS3-203ENST00000439936 MMRN1Q13201 1228 aa11.24□□□□□ -0.61
COPS3-203ENST00000439936 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
COPS3-203ENST00000439936 C3P01024 1663 aa11.24□□□□□ -0.61
COPS3-203ENST00000439936 RNF17Q9BXT8 1623 aaKnown RBP11.23□□□□□ -0.61
COPS3-203ENST00000439936 PDAP1Q13442 181 aaKnown RBP11.23□□□□□ -0.61
COPS3-203ENST00000439936 FBXO31Q5XUX0 539 aaPredicted RBP11.23□□□□□ -0.61
COPS3-203ENST00000439936 MROH1Q8NDA8 1641 aa11.23□□□□□ -0.61
COPS3-203ENST00000439936 MROH2AA6NES4 1674 aa11.22□□□□□ -0.61
COPS3-203ENST00000439936 PDCD7Q8N8D1 485 aaKnown RBP11.22□□□□□ -0.61
COPS3-203ENST00000439936 NAIPQ13075 1403 aa11.22□□□□□ -0.61
COPS3-203ENST00000439936 KANK1Q14678 1352 aa11.21□□□□□ -0.61
COPS3-203ENST00000439936 RNF25Q96BH1 459 aaPredicted RBP11.21□□□□□ -0.61
COPS3-203ENST00000439936 CEP152O94986 1710 aa11.2□□□□□ -0.62
COPS3-203ENST00000439936 DEPDC5O75140 1603 aa11.2□□□□□ -0.62
COPS3-203ENST00000439936 KDM5DQ9BY66 1539 aa11.19□□□□□ -0.62
COPS3-203ENST00000439936 ABCC3O15438 1527 aa11.19□□□□□ -0.62
COPS3-203ENST00000439936 FAM135AQ9P2D6 1515 aa11.19□□□□□ -0.62
COPS3-203ENST00000439936 RGL2O15211 777 aa11.18□□□□□ -0.62
COPS3-203ENST00000439936 NUP155O75694 1391 aa11.18□□□□□ -0.62
COPS3-203ENST00000439936 VWDEQ8N2E2 1590 aa11.18□□□□□ -0.62
COPS3-203ENST00000439936 HFM1A2PYH4 1435 aa11.18□□□□□ -0.62
COPS3-203ENST00000439936 NPATQ14207 1427 aa11.18□□□□□ -0.62
COPS3-203ENST00000439936 MARVELD3Q96A59 401 aa11.17□□□□□ -0.62
COPS3-203ENST00000439936 PRDM15P57071 1507 aaPredicted RBP11.17□□□□□ -0.62
COPS3-203ENST00000439936 HSPA2P54652 639 aa11.16□□□□□ -0.62
COPS3-203ENST00000439936 TRIM52Q96A61 297 aa11.16□□□□□ -0.62
COPS3-203ENST00000439936 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.16□□□□□ -0.62
COPS3-203ENST00000439936 ZC3H13Q5T200 1668 aaKnown RBP11.16□□□□□ -0.62
COPS3-203ENST00000439936 PZPP20742 1482 aa11.16□□□□□ -0.62
COPS3-203ENST00000439936 EMP3P54852 163 aa11.16□□□□□ -0.62
COPS3-203ENST00000439936 ILDR1Q86SU0 546 aaPredicted RBP11.16□□□□□ -0.62
COPS3-203ENST00000439936 CABP2Q9NPB3 220 aa11.16□□□□□ -0.62
COPS3-203ENST00000439936 CAMSAP1Q5T5Y3 1602 aa11.15□□□□□ -0.62
COPS3-203ENST00000439936 GCC2Q8IWJ2 1684 aa11.15□□□□□ -0.62
COPS3-203ENST00000439936 ARHGAP31Q2M1Z3 1444 aa11.15□□□□□ -0.62
COPS3-203ENST00000439936 LMTK2Q8IWU2 1503 aa11.15□□□□□ -0.62
COPS3-203ENST00000439936 UNC13BO14795 1591 aa11.15□□□□□ -0.62
COPS3-203ENST00000439936 TNRQ92752 1358 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms