RNA–Protein interactions for RNA: ENST00000438610.5

MTA1-208, Transcript of metastasis associated 1, humanhuman

TSL 1 (best)

Gene MTA1, Length 2,144 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-208ENST00000438610 KIAA1210Q9ULL0 1709 aa25.98■■□□□ 1.75
MTA1-208ENST00000438610 VGFO15240 615 aaPredicted RBP25.96■■□□□ 1.75
MTA1-208ENST00000438610 DDX10Q13206 875 aaKnown RBP25.96■■□□□ 1.75
MTA1-208ENST00000438610 WASHC2AQ641Q2 1341 aa25.95■■□□□ 1.74
MTA1-208ENST00000438610 ZFYVE9O95405 1425 aa25.94■■□□□ 1.74
MTA1-208ENST00000438610 NEXMIFQ5QGS0 1516 aa25.94■■□□□ 1.74
MTA1-208ENST00000438610 MIER1Q8N108 512 aa25.93■■□□□ 1.74
MTA1-208ENST00000438610 TNRQ92752 1358 aa25.93■■□□□ 1.74
MTA1-208ENST00000438610 ST20-MTHFSA0A0A6YYL1 179 aa25.93■■□□□ 1.74
MTA1-208ENST00000438610 STAG3Q9UJ98 1225 aa25.93■■□□□ 1.74
MTA1-208ENST00000438610 C11orf95C9JLR9 678 aaPredicted RBP25.91■■□□□ 1.74
MTA1-208ENST00000438610 PIK3C2GO75747 1445 aa25.91■■□□□ 1.74
MTA1-208ENST00000438610 CCDC7Q96M83 1385 aa25.9■■□□□ 1.74
MTA1-208ENST00000438610 FER1L4A9Z1Z3 1794 aa25.9■■□□□ 1.74
MTA1-208ENST00000438610 CFAP70Q5T0N1 1121 aa25.9■■□□□ 1.74
MTA1-208ENST00000438610 MYO5BQ9ULV0 1848 aa25.89■■□□□ 1.74
MTA1-208ENST00000438610 C14orf93Q9H972 538 aaKnown RBP25.89■■□□□ 1.74
MTA1-208ENST00000438610 A2ML1A8K2U0 1454 aa25.88■■□□□ 1.73
MTA1-208ENST00000438610 SCAF11Q99590 1463 aaKnown RBP25.86■■□□□ 1.73
MTA1-208ENST00000438610 POLR1AO95602 1720 aaPredicted RBP25.85■■□□□ 1.73
MTA1-208ENST00000438610 KIF7Q2M1P5 1343 aa25.85■■□□□ 1.73
MTA1-208ENST00000438610 CEBPAP49715 358 aaPredicted RBP25.85■■□□□ 1.73
MTA1-208ENST00000438610 C3P01024 1663 aa25.85■■□□□ 1.73
MTA1-208ENST00000438610 SETBP1Q9Y6X0 1596 aa25.84■■□□□ 1.73
MTA1-208ENST00000438610 IQGAP1P46940 1657 aa25.83■■□□□ 1.73
MTA1-208ENST00000438610 NLRP1Q9C000 1473 aa25.82■■□□□ 1.72
MTA1-208ENST00000438610 KDM5AP29375 1690 aaKnown RBP25.82■■□□□ 1.72
MTA1-208ENST00000438610 NUTM2DQ5VT03 806 aaPredicted RBP25.82■■□□□ 1.72
MTA1-208ENST00000438610 TESK2Q96S53 571 aa25.79■■□□□ 1.72
MTA1-208ENST00000438610 EIF3AQ14152 1382 aaKnown RBP25.79■■□□□ 1.72
MTA1-208ENST00000438610 RIMS2Q9UQ26 1411 aa25.78■■□□□ 1.72
MTA1-208ENST00000438610 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.78■■□□□ 1.72
MTA1-208ENST00000438610 HDGFP51858 240 aaKnown RBP25.78■■□□□ 1.72
MTA1-208ENST00000438610 ADAMTSL3P82987 1691 aa25.77■■□□□ 1.72
MTA1-208ENST00000438610 ADGRB1O14514 1584 aa25.75■■□□□ 1.71
MTA1-208ENST00000438610 SLC24A1O60721 1099 aa25.74■■□□□ 1.71
MTA1-208ENST00000438610 UBR1Q8IWV7 1749 aa25.73■■□□□ 1.71
MTA1-208ENST00000438610 TMF1P82094 1093 aa25.72■■□□□ 1.71
MTA1-208ENST00000438610 RIMS1Q86UR5 1692 aaKnown RBP25.71■■□□□ 1.71
MTA1-208ENST00000438610 TMEM2Q9UHN6 1383 aa25.71■■□□□ 1.71
MTA1-208ENST00000438610 TMEM132EQ6IEE7 984 aa25.7■■□□□ 1.71
MTA1-208ENST00000438610 PLPPR3Q6T4P5 718 aa25.69■■□□□ 1.7
MTA1-208ENST00000438610 ANP32CO43423 234 aa25.66■■□□□ 1.7
MTA1-208ENST00000438610 POLR3GLQ9BT43 218 aa25.66■■□□□ 1.7
MTA1-208ENST00000438610 ALKQ9UM73 1620 aa25.66■■□□□ 1.7
MTA1-208ENST00000438610 TRAK1Q9UPV9 953 aa25.66■■□□□ 1.7
MTA1-208ENST00000438610 DISP3Q9P2K9 1392 aa25.65■■□□□ 1.7
MTA1-208ENST00000438610 THEMISQ8N1K5 641 aaPredicted RBP25.64■■□□□ 1.7
MTA1-208ENST00000438610 MYO3AQ8NEV4 1616 aa25.64■■□□□ 1.7
MTA1-208ENST00000438610 CDCA8Q53HL2 280 aa25.64■■□□□ 1.69
MTA1-208ENST00000438610 SBNO2Q9Y2G9 1366 aa25.64■■□□□ 1.69
MTA1-208ENST00000438610 CENPJQ9HC77 1338 aaPredicted RBP25.63■■□□□ 1.69
MTA1-208ENST00000438610 ASXL1Q8IXJ9 1541 aa25.61■■□□□ 1.69
MTA1-208ENST00000438610 SLIT1O75093 1534 aa25.6■■□□□ 1.69
MTA1-208ENST00000438610 ARHGAP23Q9P227 1491 aa25.6■■□□□ 1.69
MTA1-208ENST00000438610 SETD1BQ9UPS6 1966 aaKnown RBP25.59■■□□□ 1.69
MTA1-208ENST00000438610 EID1Q9Y6B2 187 aa25.59■■□□□ 1.69
MTA1-208ENST00000438610 YTHDC2Q9H6S0 1430 aaKnown RBP25.58■■□□□ 1.69
MTA1-208ENST00000438610 TXNDC2Q86VQ3 553 aa25.57■■□□□ 1.68
MTA1-208ENST00000438610 LTKP29376 864 aa25.57■■□□□ 1.68
MTA1-208ENST00000438610 SENP3Q9H4L4 574 aaPredicted RBP25.57■■□□□ 1.68
MTA1-208ENST00000438610 PTPRMP28827 1452 aa25.56■■□□□ 1.68
MTA1-208ENST00000438610 CENPBP07199 599 aaPredicted RBP25.56■■□□□ 1.68
MTA1-208ENST00000438610 PLEKHG1Q9ULL1 1385 aa25.56■■□□□ 1.68
MTA1-208ENST00000438610 NRXN3Q9Y4C0 1643 aa25.56■■□□□ 1.68
MTA1-208ENST00000438610 CEP170BQ9Y4F5 1589 aaPredicted RBP25.55■■□□□ 1.68
MTA1-208ENST00000438610 SETD1AO15047 1707 aaKnown RBP25.54■■□□□ 1.68
MTA1-208ENST00000438610 ARHGEF28Q8N1W1 1705 aaKnown RBP25.54■■□□□ 1.68
MTA1-208ENST00000438610 STK26Q9P289 416 aa25.54■■□□□ 1.68
MTA1-208ENST00000438610 LRPPRCP42704 1394 aaKnown RBP25.53■■□□□ 1.68
MTA1-208ENST00000438610 CCER2I3L3R5 266 aa25.52■■□□□ 1.68
MTA1-208ENST00000438610 BCANQ96GW7 911 aa25.51■■□□□ 1.67
MTA1-208ENST00000438610 ABCC11Q96J66 1382 aa25.5■■□□□ 1.67
MTA1-208ENST00000438610 QRICH2Q9H0J4 1663 aa25.5■■□□□ 1.67
MTA1-208ENST00000438610 ZNF142P52746 1687 aaPredicted RBP25.48■■□□□ 1.67
MTA1-208ENST00000438610 ADAMTS13Q76LX8 1427 aa25.48■■□□□ 1.67
MTA1-208ENST00000438610 DLC1Q96QB1 1528 aa25.48■■□□□ 1.67
MTA1-208ENST00000438610 PUS7Q96PZ0 661 aaKnown RBP25.48■■□□□ 1.67
MTA1-208ENST00000438610 METP08581 1390 aa25.48■■□□□ 1.67
MTA1-208ENST00000438610 PRKRIP1Q9H875 184 aaPredicted RBP25.48■■□□□ 1.67
MTA1-208ENST00000438610 YTHDC1Q96MU7 727 aaKnown RBP25.47■■□□□ 1.67
MTA1-208ENST00000438610 SIRT1Q96EB6 747 aa25.46■■□□□ 1.67
MTA1-208ENST00000438610 MED14O60244 1454 aa25.46■■□□□ 1.67
MTA1-208ENST00000438610 PRAM1Q96QH2 718 aa25.45■■□□□ 1.66
MTA1-208ENST00000438610 POGKQ9P215 609 aa25.45■■□□□ 1.66
MTA1-208ENST00000438610 PER1O15534 1290 aaPredicted RBP25.44■■□□□ 1.66
MTA1-208ENST00000438610 PANK3Q9H999 370 aa25.44■■□□□ 1.66
MTA1-208ENST00000438610 TBX22Q9Y458 520 aa25.44■■□□□ 1.66
MTA1-208ENST00000438610 EVC2Q86UK5 1308 aa25.44■■□□□ 1.66
MTA1-208ENST00000438610 TECPR2O15040 1411 aa25.41■■□□□ 1.66
MTA1-208ENST00000438610 ANKLE2Q86XL3 938 aa25.4■■□□□ 1.66
MTA1-208ENST00000438610 SAFB2Q14151 953 aaKnown RBP eCLIP25.39■■□□□ 1.66
MTA1-208ENST00000438610 FAM135BQ49AJ0 1406 aa25.38■■□□□ 1.65
MTA1-208ENST00000438610 SLC26A8Q96RN1 970 aa25.38■■□□□ 1.65
MTA1-208ENST00000438610 KNDC1Q76NI1 1749 aa25.38■■□□□ 1.65
MTA1-208ENST00000438610 DIP2AQ14689 1571 aa25.37■■□□□ 1.65
MTA1-208ENST00000438610 KTN1Q86UP2 1357 aaKnown RBP25.37■■□□□ 1.65
MTA1-208ENST00000438610 TULP4Q9NRJ4 1543 aa25.37■■□□□ 1.65
MTA1-208ENST00000438610 MYOM1P52179 1685 aa25.36■■□□□ 1.65
MTA1-208ENST00000438610 WAPLQ7Z5K2 1190 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms